Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 AC113430.1-201ENST00000506872 718 ntBASIC4.42□□□□□ -1.7
PHRF1Q9P1Y6 AC010374.2-201ENST00000512933 535 ntBASIC4.42□□□□□ -1.7
PHRF1Q9P1Y6 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.42□□□□□ -1.7
PHRF1Q9P1Y6 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.42□□□□□ -1.7
PHRF1Q9P1Y6 MIR2682-201ENST00000580305 110 ntBASIC4.42□□□□□ -1.7
PHRF1Q9P1Y6 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.42□□□□□ -1.7
PHRF1Q9P1Y6 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC4.42□□□□□ -1.7
PHRF1Q9P1Y6 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.42□□□□□ -1.7
PHRF1Q9P1Y6 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
PHRF1Q9P1Y6 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PHRF1Q9P1Y6 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PHRF1Q9P1Y6 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC4.41□□□□□ -1.7
PHRF1Q9P1Y6 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.41□□□□□ -1.7
PHRF1Q9P1Y6 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PHRF1Q9P1Y6 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PHRF1Q9P1Y6 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PHRF1Q9P1Y6 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PHRF1Q9P1Y6 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PHRF1Q9P1Y6 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PHRF1Q9P1Y6 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.41□□□□□ -1.7
PHRF1Q9P1Y6 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.41□□□□□ -1.7
PHRF1Q9P1Y6 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.41□□□□□ -1.7
PHRF1Q9P1Y6 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PHRF1Q9P1Y6 SYT14P1-201ENST00000481459 721 ntBASIC4.41□□□□□ -1.7
PHRF1Q9P1Y6 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.41□□□□□ -1.7
PHRF1Q9P1Y6 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.41□□□□□ -1.7
PHRF1Q9P1Y6 BRDTP1-201ENST00000605735 677 ntBASIC4.41□□□□□ -1.7
PHRF1Q9P1Y6 RMST_9.1-201ENST00000619945 193 ntBASIC4.41□□□□□ -1.7
PHRF1Q9P1Y6 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PHRF1Q9P1Y6 CR383658.2-201ENST00000547576 1525 ntBASIC4.41□□□□□ -1.7
PHRF1Q9P1Y6 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PHRF1Q9P1Y6 NCAPGP1-201ENST00000505112 1814 ntBASIC4.41□□□□□ -1.7
PHRF1Q9P1Y6 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC4.41□□□□□ -1.7
PHRF1Q9P1Y6 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.41□□□□□ -1.7
PHRF1Q9P1Y6 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
PHRF1Q9P1Y6 AC006504.1-201ENST00000562493 3666 ntBASIC4.4□□□□□ -1.7
PHRF1Q9P1Y6 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
PHRF1Q9P1Y6 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PHRF1Q9P1Y6 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
PHRF1Q9P1Y6 AL138885.1-201ENST00000405921 675 ntBASIC4.4□□□□□ -1.7
PHRF1Q9P1Y6 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
PHRF1Q9P1Y6 AC012065.2-201ENST00000421295 375 ntBASIC4.4□□□□□ -1.7
PHRF1Q9P1Y6 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.4□□□□□ -1.7
PHRF1Q9P1Y6 ACTG1P13-201ENST00000486987 1043 ntBASIC4.4□□□□□ -1.7
PHRF1Q9P1Y6 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.4□□□□□ -1.7
PHRF1Q9P1Y6 RNA5SP356-201ENST00000515972 94 ntBASIC4.4□□□□□ -1.7
PHRF1Q9P1Y6 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.4□□□□□ -1.7
PHRF1Q9P1Y6 PSMA2P1-201ENST00000526365 646 ntBASIC4.4□□□□□ -1.7
PHRF1Q9P1Y6 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
PHRF1Q9P1Y6 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
PHRF1Q9P1Y6 AC135001.1-201ENST00000544546 283 ntBASIC4.4□□□□□ -1.7
PHRF1Q9P1Y6 AL121576.1-201ENST00000556055 276 ntBASIC4.4□□□□□ -1.7
PHRF1Q9P1Y6 AC106785.3-201ENST00000564064 847 ntBASIC4.4□□□□□ -1.7
PHRF1Q9P1Y6 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.4□□□□□ -1.7
PHRF1Q9P1Y6 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC4.4□□□□□ -1.7
PHRF1Q9P1Y6 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PHRF1Q9P1Y6 AC017071.1-201ENST00000564407 2204 ntBASIC4.4□□□□□ -1.71
PHRF1Q9P1Y6 ZNF90P1-201ENST00000480493 1951 ntBASIC4.4□□□□□ -1.71
PHRF1Q9P1Y6 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.4□□□□□ -1.71
PHRF1Q9P1Y6 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
PHRF1Q9P1Y6 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PHRF1Q9P1Y6 GCNT6-201ENST00000379591 934 ntBASIC4.39□□□□□ -1.71
PHRF1Q9P1Y6 AL357552.1-201ENST00000445254 415 ntBASIC4.39□□□□□ -1.71
PHRF1Q9P1Y6 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.39□□□□□ -1.71
PHRF1Q9P1Y6 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.39□□□□□ -1.71
PHRF1Q9P1Y6 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.39□□□□□ -1.71
PHRF1Q9P1Y6 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.39□□□□□ -1.71
PHRF1Q9P1Y6 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.39□□□□□ -1.71
PHRF1Q9P1Y6 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.39□□□□□ -1.71
PHRF1Q9P1Y6 AC018692.3-201ENST00000623929 123 ntBASIC4.39□□□□□ -1.71
PHRF1Q9P1Y6 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PHRF1Q9P1Y6 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
PHRF1Q9P1Y6 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
PHRF1Q9P1Y6 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
PHRF1Q9P1Y6 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PHRF1Q9P1Y6 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PHRF1Q9P1Y6 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
PHRF1Q9P1Y6 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.39□□□□□ -1.71
PHRF1Q9P1Y6 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PHRF1Q9P1Y6 OR6K4P-201ENST00000423179 955 ntBASIC4.39□□□□□ -1.71
PHRF1Q9P1Y6 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.39□□□□□ -1.71
PHRF1Q9P1Y6 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.39□□□□□ -1.71
PHRF1Q9P1Y6 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.39□□□□□ -1.71
PHRF1Q9P1Y6 RPL12P22-201ENST00000519073 490 ntBASIC4.39□□□□□ -1.71
PHRF1Q9P1Y6 AC027309.2-201ENST00000520566 192 ntBASIC4.39□□□□□ -1.71
PHRF1Q9P1Y6 AC087276.1-201ENST00000529659 480 ntBASIC4.39□□□□□ -1.71
PHRF1Q9P1Y6 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.39□□□□□ -1.71
PHRF1Q9P1Y6 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.39□□□□□ -1.71
PHRF1Q9P1Y6 AC104984.5-201ENST00000586878 94 ntBASIC4.39□□□□□ -1.71
PHRF1Q9P1Y6 AL162713.1-201ENST00000604480 262 ntBASIC4.39□□□□□ -1.71
PHRF1Q9P1Y6 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
PHRF1Q9P1Y6 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
PHRF1Q9P1Y6 CR381670.1-201ENST00000624291 1693 ntBASIC4.38□□□□□ -1.71
PHRF1Q9P1Y6 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
PHRF1Q9P1Y6 SKP1P1-201ENST00000438081 489 ntBASIC4.38□□□□□ -1.71
PHRF1Q9P1Y6 AC021205.2-201ENST00000480069 347 ntBASIC4.38□□□□□ -1.71
PHRF1Q9P1Y6 AC068724.1-201ENST00000487100 792 ntBASIC4.38□□□□□ -1.71
PHRF1Q9P1Y6 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.38□□□□□ -1.71
PHRF1Q9P1Y6 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.38□□□□□ -1.71
PHRF1Q9P1Y6 BNIP3P38-201ENST00000601117 544 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms