Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SSU72Q9NP77 MIR4742-201ENST00000581069 85 ntBASIC5.69□□□□□ -1.5
SSU72Q9NP77 AC106900.2-201ENST00000604994 317 ntBASIC5.69□□□□□ -1.5
SSU72Q9NP77 AC068831.8-201ENST00000620171 435 ntBASIC5.69□□□□□ -1.5
SSU72Q9NP77 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.69□□□□□ -1.5
SSU72Q9NP77 AC022031.1-201ENST00000585985 2593 ntBASIC5.69□□□□□ -1.5
SSU72Q9NP77 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SSU72Q9NP77 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
SSU72Q9NP77 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
SSU72Q9NP77 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SSU72Q9NP77 ZNF736P3Y-201ENST00000428264 1465 ntBASIC5.69□□□□□ -1.5
SSU72Q9NP77 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.69□□□□□ -1.5
SSU72Q9NP77 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SSU72Q9NP77 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
SSU72Q9NP77 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.69□□□□□ -1.5
SSU72Q9NP77 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
SSU72Q9NP77 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
SSU72Q9NP77 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SSU72Q9NP77 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SSU72Q9NP77 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SSU72Q9NP77 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SSU72Q9NP77 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SSU72Q9NP77 CAP1P2-201ENST00000417455 1409 ntBASIC5.68□□□□□ -1.5
SSU72Q9NP77 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.68□□□□□ -1.5
SSU72Q9NP77 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
SSU72Q9NP77 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SSU72Q9NP77 RNU6-744P-201ENST00000365557 107 ntBASIC5.68□□□□□ -1.5
SSU72Q9NP77 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.68□□□□□ -1.5
SSU72Q9NP77 SNORA20.2-201ENST00000383922 131 ntBASIC5.68□□□□□ -1.5
SSU72Q9NP77 RNU6-1316P-201ENST00000384242 108 ntBASIC5.68□□□□□ -1.5
SSU72Q9NP77 AL136116.1-201ENST00000403591 381 ntBASIC5.68□□□□□ -1.5
SSU72Q9NP77 TXNP7-201ENST00000406296 293 ntBASIC5.68□□□□□ -1.5
SSU72Q9NP77 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.68□□□□□ -1.5
SSU72Q9NP77 RNA5SP431-201ENST00000410312 120 ntBASIC5.68□□□□□ -1.5
SSU72Q9NP77 RN7SKP140-201ENST00000411196 284 ntBASIC5.68□□□□□ -1.5
SSU72Q9NP77 AC234782.4-201ENST00000417646 1048 ntBASIC5.68□□□□□ -1.5
SSU72Q9NP77 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.68□□□□□ -1.5
SSU72Q9NP77 AC007283.2-201ENST00000424739 197 ntBASIC5.68□□□□□ -1.5
SSU72Q9NP77 RPL23AP30-201ENST00000432419 501 ntBASIC5.68□□□□□ -1.5
SSU72Q9NP77 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC5.68□□□□□ -1.5
SSU72Q9NP77 AL031681.1-201ENST00000443304 400 ntBASIC5.68□□□□□ -1.5
SSU72Q9NP77 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.68□□□□□ -1.5
SSU72Q9NP77 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC5.68□□□□□ -1.5
SSU72Q9NP77 RPL7P22-201ENST00000466005 733 ntBASIC5.68□□□□□ -1.5
SSU72Q9NP77 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.68□□□□□ -1.5
SSU72Q9NP77 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC5.68□□□□□ -1.5
SSU72Q9NP77 AC090453.1-201ENST00000495560 436 ntBASIC5.68□□□□□ -1.5
SSU72Q9NP77 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.68□□□□□ -1.5
SSU72Q9NP77 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SSU72Q9NP77 AC110792.2-201ENST00000510278 224 ntBASIC5.68□□□□□ -1.5
SSU72Q9NP77 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC5.68□□□□□ -1.5
SSU72Q9NP77 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC5.68□□□□□ -1.5
SSU72Q9NP77 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC5.68□□□□□ -1.5
SSU72Q9NP77 RNU6-488P-201ENST00000515918 99 ntBASIC5.68□□□□□ -1.5
SSU72Q9NP77 BTF3P12-201ENST00000519620 469 ntBASIC5.68□□□□□ -1.5
SSU72Q9NP77 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.68□□□□□ -1.5
SSU72Q9NP77 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SSU72Q9NP77 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
SSU72Q9NP77 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.68□□□□□ -1.5
SSU72Q9NP77 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC5.68□□□□□ -1.5
SSU72Q9NP77 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.68□□□□□ -1.5
SSU72Q9NP77 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.68□□□□□ -1.5
SSU72Q9NP77 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC5.68□□□□□ -1.5
SSU72Q9NP77 IGKV2OR2-7-201ENST00000604652 304 ntBASIC5.68□□□□□ -1.5
SSU72Q9NP77 AL355802.3-201ENST00000607571 545 ntBASIC5.68□□□□□ -1.5
SSU72Q9NP77 AL136131.3-201ENST00000607600 188 ntBASIC5.68□□□□□ -1.5
SSU72Q9NP77 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC5.68□□□□□ -1.5
SSU72Q9NP77 AC022106.2-201ENST00000620114 757 ntBASIC5.68□□□□□ -1.5
SSU72Q9NP77 AC089999.3-201ENST00000622440 577 ntBASIC5.68□□□□□ -1.5
SSU72Q9NP77 AC018628.1-201ENST00000624147 3819 ntBASIC5.68□□□□□ -1.5
SSU72Q9NP77 TEX41-265ENST00000627785 704 ntTSL 5 BASIC5.68□□□□□ -1.5
SSU72Q9NP77 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.68□□□□□ -1.5
SSU72Q9NP77 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC5.68□□□□□ -1.5
SSU72Q9NP77 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
SSU72Q9NP77 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.68□□□□□ -1.5
SSU72Q9NP77 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
SSU72Q9NP77 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
SSU72Q9NP77 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.68□□□□□ -1.5
SSU72Q9NP77 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.68□□□□□ -1.5
SSU72Q9NP77 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SSU72Q9NP77 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.68□□□□□ -1.5
SSU72Q9NP77 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SSU72Q9NP77 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.67□□□□□ -1.5
SSU72Q9NP77 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
SSU72Q9NP77 AC011755.1-201ENST00000623763 2049 ntBASIC5.67□□□□□ -1.5
SSU72Q9NP77 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.67□□□□□ -1.5
SSU72Q9NP77 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
SSU72Q9NP77 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.67□□□□□ -1.5
SSU72Q9NP77 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
SSU72Q9NP77 AL121839.2-201ENST00000565058 6943 ntBASIC5.67□□□□□ -1.5
SSU72Q9NP77 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SSU72Q9NP77 MAPK10-328ENST00000641553 4009 ntBASIC5.67□□□□□ -1.5
SSU72Q9NP77 RNU6-108P-201ENST00000365558 107 ntBASIC5.67□□□□□ -1.5
SSU72Q9NP77 SNORD42.2-201ENST00000365570 69 ntBASIC5.67□□□□□ -1.5
SSU72Q9NP77 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
SSU72Q9NP77 RNU6-444P-201ENST00000383988 108 ntBASIC5.67□□□□□ -1.5
SSU72Q9NP77 SNORA32.2-201ENST00000384049 122 ntBASIC5.67□□□□□ -1.5
SSU72Q9NP77 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SSU72Q9NP77 RNU6-510P-201ENST00000391239 108 ntBASIC5.67□□□□□ -1.5
SSU72Q9NP77 ARSFP1-201ENST00000398758 477 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms