Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 RNA5SP367-201ENST00000516557 118 ntBASIC3.18□□□□□ -1.9
CHD8Q9HCK8 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC3.18□□□□□ -1.9
CHD8Q9HCK8 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CHD8Q9HCK8 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC3.18□□□□□ -1.9
CHD8Q9HCK8 ZNF72P-201ENST00000425869 1908 ntBASIC3.17□□□□□ -1.9
CHD8Q9HCK8 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CHD8Q9HCK8 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CHD8Q9HCK8 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CHD8Q9HCK8 MIR512-1-201ENST00000384913 84 ntBASIC3.17□□□□□ -1.9
CHD8Q9HCK8 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.17□□□□□ -1.9
CHD8Q9HCK8 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.17□□□□□ -1.9
CHD8Q9HCK8 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.17□□□□□ -1.9
CHD8Q9HCK8 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.17□□□□□ -1.9
CHD8Q9HCK8 AC021678.1-201ENST00000505195 936 ntBASIC3.17□□□□□ -1.9
CHD8Q9HCK8 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.17□□□□□ -1.9
CHD8Q9HCK8 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CHD8Q9HCK8 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.17□□□□□ -1.9
CHD8Q9HCK8 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.17□□□□□ -1.9
CHD8Q9HCK8 AL732618.1-201ENST00000623251 301 ntBASIC3.17□□□□□ -1.9
CHD8Q9HCK8 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CHD8Q9HCK8 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC3.17□□□□□ -1.9
CHD8Q9HCK8 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CHD8Q9HCK8 AC046144.1-201ENST00000478559 1853 ntBASIC3.17□□□□□ -1.9
CHD8Q9HCK8 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC3.17□□□□□ -1.9
CHD8Q9HCK8 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.17□□□□□ -1.9
CHD8Q9HCK8 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CHD8Q9HCK8 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CHD8Q9HCK8 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
CHD8Q9HCK8 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.17□□□□□ -1.9
CHD8Q9HCK8 RNU6-14P-201ENST00000384630 106 ntBASIC3.17□□□□□ -1.9
CHD8Q9HCK8 AC007563.3-201ENST00000433233 371 ntBASIC3.17□□□□□ -1.9
CHD8Q9HCK8 CBX1P4-201ENST00000439415 457 ntBASIC3.17□□□□□ -1.9
CHD8Q9HCK8 PRELID3BP7-201ENST00000503606 469 ntBASIC3.17□□□□□ -1.9
CHD8Q9HCK8 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.17□□□□□ -1.9
CHD8Q9HCK8 AC090151.1-201ENST00000520784 730 ntBASIC3.17□□□□□ -1.9
CHD8Q9HCK8 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.17□□□□□ -1.9
CHD8Q9HCK8 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC3.17□□□□□ -1.9
CHD8Q9HCK8 AC009570.1-201ENST00000609599 745 ntBASIC3.17□□□□□ -1.9
CHD8Q9HCK8 AC105227.2-201ENST00000615075 605 ntBASIC3.17□□□□□ -1.9
CHD8Q9HCK8 AC095038.2-201ENST00000621464 1070 ntBASIC3.17□□□□□ -1.9
CHD8Q9HCK8 AC099063.3-201ENST00000642066 185 ntBASIC3.17□□□□□ -1.9
CHD8Q9HCK8 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.17□□□□□ -1.9
CHD8Q9HCK8 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.16□□□□□ -1.9
CHD8Q9HCK8 RPS4XP13-201ENST00000483219 789 ntBASIC3.16□□□□□ -1.9
CHD8Q9HCK8 AC078899.3-201ENST00000599065 212 ntBASIC3.16□□□□□ -1.9
CHD8Q9HCK8 AC026634.1-201ENST00000634369 198 ntBASIC3.16□□□□□ -1.9
CHD8Q9HCK8 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
CHD8Q9HCK8 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CHD8Q9HCK8 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.16□□□□□ -1.9
CHD8Q9HCK8 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.16□□□□□ -1.9
CHD8Q9HCK8 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CHD8Q9HCK8 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.16□□□□□ -1.9
CHD8Q9HCK8 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
CHD8Q9HCK8 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CHD8Q9HCK8 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CHD8Q9HCK8 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CHD8Q9HCK8 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CHD8Q9HCK8 Y_RNA.116-201ENST00000363292 103 ntBASIC3.16□□□□□ -1.9
CHD8Q9HCK8 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.16□□□□□ -1.9
CHD8Q9HCK8 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.16□□□□□ -1.9
CHD8Q9HCK8 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC3.16□□□□□ -1.9
CHD8Q9HCK8 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.16□□□□□ -1.9
CHD8Q9HCK8 SNORD53-201ENST00000579969 78 ntBASIC3.16□□□□□ -1.9
CHD8Q9HCK8 AC005086.4-201ENST00000623065 213 ntBASIC3.16□□□□□ -1.9
CHD8Q9HCK8 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.16□□□□□ -1.9
CHD8Q9HCK8 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CHD8Q9HCK8 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
CHD8Q9HCK8 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CHD8Q9HCK8 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
CHD8Q9HCK8 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CHD8Q9HCK8 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC3.16□□□□□ -1.9
CHD8Q9HCK8 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CHD8Q9HCK8 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC3.15□□□□□ -1.9
CHD8Q9HCK8 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CHD8Q9HCK8 Y_RNA.178-201ENST00000363832 102 ntBASIC3.15□□□□□ -1.9
CHD8Q9HCK8 SNORA25.9-201ENST00000365087 128 ntBASIC3.15□□□□□ -1.9
CHD8Q9HCK8 EEF1A1P41-201ENST00000414667 207 ntBASIC3.15□□□□□ -1.9
CHD8Q9HCK8 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.15□□□□□ -1.9
CHD8Q9HCK8 SKP1P3-201ENST00000429280 487 ntBASIC3.15□□□□□ -1.9
CHD8Q9HCK8 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC3.15□□□□□ -1.9
CHD8Q9HCK8 RPL23AP23-201ENST00000452590 471 ntBASIC3.15□□□□□ -1.9
CHD8Q9HCK8 VN1R40P-201ENST00000455196 941 ntBASIC3.15□□□□□ -1.9
CHD8Q9HCK8 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
CHD8Q9HCK8 AC006557.5-201ENST00000603126 811 ntBASIC3.15□□□□□ -1.9
CHD8Q9HCK8 AC234782.5-201ENST00000617723 324 ntBASIC3.15□□□□□ -1.9
CHD8Q9HCK8 AL353997.5-201ENST00000618886 171 ntBASIC3.15□□□□□ -1.9
CHD8Q9HCK8 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.15□□□□□ -1.9
CHD8Q9HCK8 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CHD8Q9HCK8 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CHD8Q9HCK8 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.15□□□□□ -1.91
CHD8Q9HCK8 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CHD8Q9HCK8 SNORA67.4-201ENST00000384688 142 ntBASIC3.15□□□□□ -1.91
CHD8Q9HCK8 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC3.15□□□□□ -1.91
CHD8Q9HCK8 MTCO1P51-201ENST00000427672 1060 ntBASIC3.15□□□□□ -1.91
CHD8Q9HCK8 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.15□□□□□ -1.91
CHD8Q9HCK8 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.15□□□□□ -1.91
CHD8Q9HCK8 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.15□□□□□ -1.91
CHD8Q9HCK8 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC3.15□□□□□ -1.91
CHD8Q9HCK8 RNU4-29P-201ENST00000515943 174 ntBASIC3.15□□□□□ -1.91
CHD8Q9HCK8 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms