Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
LRRC40Q9H9A6 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
LRRC40Q9H9A6 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
LRRC40Q9H9A6 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.9□□□□□ -1.78
LRRC40Q9H9A6 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.9□□□□□ -1.78
LRRC40Q9H9A6 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
LRRC40Q9H9A6 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.9□□□□□ -1.79
LRRC40Q9H9A6 RNA5SP443-201ENST00000363083 132 ntBASIC3.9□□□□□ -1.79
LRRC40Q9H9A6 RNU6-252P-201ENST00000363232 107 ntBASIC3.9□□□□□ -1.79
LRRC40Q9H9A6 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
LRRC40Q9H9A6 AL356057.1-202ENST00000402263 756 ntBASIC3.9□□□□□ -1.79
LRRC40Q9H9A6 AL138878.1-201ENST00000405131 347 ntBASIC3.9□□□□□ -1.79
LRRC40Q9H9A6 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.9□□□□□ -1.79
LRRC40Q9H9A6 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.9□□□□□ -1.79
LRRC40Q9H9A6 C4BPAP2-201ENST00000428434 478 ntBASIC3.9□□□□□ -1.79
LRRC40Q9H9A6 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.9□□□□□ -1.79
LRRC40Q9H9A6 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.9□□□□□ -1.79
LRRC40Q9H9A6 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.9□□□□□ -1.79
LRRC40Q9H9A6 H2AFZP6-201ENST00000444403 394 ntBASIC3.9□□□□□ -1.79
LRRC40Q9H9A6 AC006326.1-201ENST00000445465 787 ntBASIC3.9□□□□□ -1.79
LRRC40Q9H9A6 MRPL35P4-201ENST00000453682 566 ntBASIC3.9□□□□□ -1.79
LRRC40Q9H9A6 AC010307.1-201ENST00000467206 836 ntBASIC3.9□□□□□ -1.79
LRRC40Q9H9A6 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.9□□□□□ -1.79
LRRC40Q9H9A6 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.9□□□□□ -1.79
LRRC40Q9H9A6 AC084198.1-201ENST00000477747 402 ntBASIC3.9□□□□□ -1.79
LRRC40Q9H9A6 AC092451.1-201ENST00000480211 153 ntBASIC3.9□□□□□ -1.79
LRRC40Q9H9A6 RPS4XP15-201ENST00000489210 795 ntBASIC3.9□□□□□ -1.79
LRRC40Q9H9A6 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.9□□□□□ -1.79
LRRC40Q9H9A6 SUMO2P20-201ENST00000520803 283 ntBASIC3.9□□□□□ -1.79
LRRC40Q9H9A6 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.9□□□□□ -1.79
LRRC40Q9H9A6 AP004242.1-201ENST00000533701 349 ntBASIC3.9□□□□□ -1.79
LRRC40Q9H9A6 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.9□□□□□ -1.79
LRRC40Q9H9A6 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.9□□□□□ -1.79
LRRC40Q9H9A6 AC092747.2-201ENST00000545069 983 ntBASIC3.9□□□□□ -1.79
LRRC40Q9H9A6 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.9□□□□□ -1.79
LRRC40Q9H9A6 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.9□□□□□ -1.79
LRRC40Q9H9A6 AL137849.1-201ENST00000604767 169 ntBASIC3.9□□□□□ -1.79
LRRC40Q9H9A6 AC135178.6-201ENST00000605314 398 ntBASIC3.9□□□□□ -1.79
LRRC40Q9H9A6 BRDTP1-201ENST00000605735 677 ntBASIC3.9□□□□□ -1.79
LRRC40Q9H9A6 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.9□□□□□ -1.79
LRRC40Q9H9A6 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
LRRC40Q9H9A6 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.9□□□□□ -1.79
LRRC40Q9H9A6 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.9□□□□□ -1.79
LRRC40Q9H9A6 AC091905.1-201ENST00000624400 311 ntBASIC3.9□□□□□ -1.79
LRRC40Q9H9A6 AF001550.2-201ENST00000636643 217 ntBASIC3.9□□□□□ -1.79
LRRC40Q9H9A6 EXOC5P1-201ENST00000510543 1969 ntBASIC3.9□□□□□ -1.79
LRRC40Q9H9A6 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.9□□□□□ -1.79
LRRC40Q9H9A6 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.9□□□□□ -1.79
LRRC40Q9H9A6 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.9□□□□□ -1.79
LRRC40Q9H9A6 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.9□□□□□ -1.79
LRRC40Q9H9A6 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.9□□□□□ -1.79
LRRC40Q9H9A6 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.9□□□□□ -1.79
LRRC40Q9H9A6 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
LRRC40Q9H9A6 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.89□□□□□ -1.79
LRRC40Q9H9A6 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
LRRC40Q9H9A6 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LRRC40Q9H9A6 AL512646.1-201ENST00000269395 1077 ntBASIC3.89□□□□□ -1.79
LRRC40Q9H9A6 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.89□□□□□ -1.79
LRRC40Q9H9A6 RNU1-13P-201ENST00000384499 162 ntBASIC3.89□□□□□ -1.79
LRRC40Q9H9A6 AL355379.1-201ENST00000405542 640 ntBASIC3.89□□□□□ -1.79
LRRC40Q9H9A6 TATDN1P1-201ENST00000414123 891 ntBASIC3.89□□□□□ -1.79
LRRC40Q9H9A6 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.89□□□□□ -1.79
LRRC40Q9H9A6 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.89□□□□□ -1.79
LRRC40Q9H9A6 RPS27P5-201ENST00000444247 244 ntBASIC3.89□□□□□ -1.79
LRRC40Q9H9A6 AL162151.2-201ENST00000448875 158 ntBASIC3.89□□□□□ -1.79
LRRC40Q9H9A6 MTCO3P20-201ENST00000454926 688 ntBASIC3.89□□□□□ -1.79
LRRC40Q9H9A6 TRBV12-2-201ENST00000489763 344 ntBASIC3.89□□□□□ -1.79
LRRC40Q9H9A6 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LRRC40Q9H9A6 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.89□□□□□ -1.79
LRRC40Q9H9A6 AC008565.1-201ENST00000509046 885 ntBASIC3.89□□□□□ -1.79
LRRC40Q9H9A6 FTH1P21-201ENST00000512179 511 ntBASIC3.89□□□□□ -1.79
LRRC40Q9H9A6 RNA5SP164-201ENST00000516533 110 ntBASIC3.89□□□□□ -1.79
LRRC40Q9H9A6 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LRRC40Q9H9A6 AL133457.1-201ENST00000564251 987 ntBASIC3.89□□□□□ -1.79
LRRC40Q9H9A6 AC233266.2-201ENST00000567067 528 ntBASIC3.89□□□□□ -1.79
LRRC40Q9H9A6 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.89□□□□□ -1.79
LRRC40Q9H9A6 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.89□□□□□ -1.79
LRRC40Q9H9A6 AC007687.1-201ENST00000602704 304 ntBASIC3.89□□□□□ -1.79
LRRC40Q9H9A6 AC125494.3-201ENST00000602759 455 ntBASIC3.89□□□□□ -1.79
LRRC40Q9H9A6 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.89□□□□□ -1.79
LRRC40Q9H9A6 AL136295.6-201ENST00000610486 658 ntBASIC3.89□□□□□ -1.79
LRRC40Q9H9A6 MIR378J-201ENST00000611988 109 ntBASIC3.89□□□□□ -1.79
LRRC40Q9H9A6 AL356490.1-201ENST00000623079 479 ntBASIC3.89□□□□□ -1.79
LRRC40Q9H9A6 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.89□□□□□ -1.79
LRRC40Q9H9A6 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.89□□□□□ -1.79
LRRC40Q9H9A6 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LRRC40Q9H9A6 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.89□□□□□ -1.79
LRRC40Q9H9A6 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LRRC40Q9H9A6 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
LRRC40Q9H9A6 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
LRRC40Q9H9A6 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.88□□□□□ -1.79
LRRC40Q9H9A6 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
LRRC40Q9H9A6 SPRR2C-201ENST00000290702 219 ntBASIC3.88□□□□□ -1.79
LRRC40Q9H9A6 OR5T3-201ENST00000303059 1023 ntBASIC3.88□□□□□ -1.79
LRRC40Q9H9A6 RNU6-543P-201ENST00000362576 108 ntBASIC3.88□□□□□ -1.79
LRRC40Q9H9A6 RNU1-18P-201ENST00000363062 164 ntBASIC3.88□□□□□ -1.79
LRRC40Q9H9A6 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
LRRC40Q9H9A6 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
LRRC40Q9H9A6 ATP5F1P4-201ENST00000397288 746 ntBASIC3.88□□□□□ -1.79
LRRC40Q9H9A6 ZNF602P-201ENST00000405929 924 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms