Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 SNORA32.2-201ENST00000384049 122 ntBASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 RNU6-74P-201ENST00000384235 107 ntBASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 HMGB1P20-201ENST00000402555 677 ntBASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 CBX1P3-201ENST00000413296 527 ntBASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 AC073136.2-201ENST00000417282 849 ntBASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 ATP5JP1-201ENST00000431631 322 ntBASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 HMGB3P24-201ENST00000433260 622 ntBASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 AC023347.2-201ENST00000433994 462 ntBASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 Y_RNA.631-201ENST00000459607 101 ntBASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 RPS17P15-201ENST00000475609 349 ntBASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 AC015724.1-201ENST00000478577 156 ntBASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 RPS27P23-201ENST00000487608 251 ntBASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 AC090096.1-201ENST00000489168 390 ntBASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 Vault.3-201ENST00000516676 95 ntBASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 ELOCP31-201ENST00000540463 467 ntBASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 AC008638.3-201ENST00000603341 463 ntBASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 AC008966.2-201ENST00000606157 453 ntBASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 AC104237.2-201ENST00000612456 443 ntBASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 RN7SL787P-201ENST00000613000 284 ntBASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 C2orf27A-204ENST00000623058 969 ntBASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 AL356585.4-201ENST00000623078 1229 ntBASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 AC000095.2-202ENST00000637415 154 ntBASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 AP004607.3-201ENST00000530354 3915 ntBASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
SSBP3Q9BWW4 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 AL138820.1-201ENST00000617901 5305 ntBASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 AL034546.1-201ENST00000623740 3693 ntBASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 SNRPEP3-201ENST00000338402 276 ntBASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 AC005294.1-201ENST00000355509 281 ntBASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 RNU6-223P-201ENST00000362830 107 ntBASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 RNA5SP394-201ENST00000364216 119 ntBASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 RNU6-115P-201ENST00000364310 107 ntBASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 SNORA33.2-201ENST00000365413 134 ntBASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 RNU6-359P-201ENST00000365466 108 ntBASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 Y_RNA.381-201ENST00000365666 102 ntBASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 RNU6-769P-201ENST00000384407 104 ntBASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 RNU6-456P-201ENST00000384493 107 ntBASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 AC087752.1-201ENST00000391360 558 ntBASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 AL121972.1-201ENST00000402023 252 ntBASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 RPS4XP8-201ENST00000402039 771 ntBASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 RN7SKP206-201ENST00000410823 293 ntBASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 RNU6-1068P-201ENST00000410958 103 ntBASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 MTND3P8-201ENST00000412909 339 ntBASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 DPPA2P2-201ENST00000418220 897 ntBASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 AC093155.2-201ENST00000420734 937 ntBASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 RPL23AP4-201ENST00000427757 463 ntBASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 AL606489.2-201ENST00000433886 234 ntBASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 IFNA20P-201ENST00000436840 528 ntBASIC4.8□□□□□ -1.64
SSBP3Q9BWW4 TXNP5-201ENST00000441043 315 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms