Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
RPAP1Q9BWH6 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.41□□□□□ -1.7
RPAP1Q9BWH6 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.41□□□□□ -1.7
RPAP1Q9BWH6 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
RPAP1Q9BWH6 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.41□□□□□ -1.7
RPAP1Q9BWH6 AC009229.4-201ENST00000623854 1947 ntBASIC4.41□□□□□ -1.7
RPAP1Q9BWH6 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
RPAP1Q9BWH6 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RPAP1Q9BWH6 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.41□□□□□ -1.7
RPAP1Q9BWH6 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
RPAP1Q9BWH6 RNA5SP267-201ENST00000364893 126 ntBASIC4.4□□□□□ -1.7
RPAP1Q9BWH6 AL034374.1-201ENST00000406329 351 ntBASIC4.4□□□□□ -1.7
RPAP1Q9BWH6 HMGB3P20-201ENST00000417997 600 ntBASIC4.4□□□□□ -1.7
RPAP1Q9BWH6 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.4□□□□□ -1.7
RPAP1Q9BWH6 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.4□□□□□ -1.7
RPAP1Q9BWH6 VN1R48P-201ENST00000448149 1036 ntBASIC4.4□□□□□ -1.7
RPAP1Q9BWH6 AC243772.1-201ENST00000451620 410 ntBASIC4.4□□□□□ -1.7
RPAP1Q9BWH6 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
RPAP1Q9BWH6 RN7SL601P-201ENST00000471221 293 ntBASIC4.4□□□□□ -1.7
RPAP1Q9BWH6 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.4□□□□□ -1.7
RPAP1Q9BWH6 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.7
RPAP1Q9BWH6 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.4□□□□□ -1.7
RPAP1Q9BWH6 AC067904.2-201ENST00000517322 1283 ntBASIC4.4□□□□□ -1.7
RPAP1Q9BWH6 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.4□□□□□ -1.7
RPAP1Q9BWH6 OR5AP1P-201ENST00000529730 940 ntBASIC4.4□□□□□ -1.7
RPAP1Q9BWH6 AL121766.1-201ENST00000547436 487 ntBASIC4.4□□□□□ -1.7
RPAP1Q9BWH6 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.4□□□□□ -1.7
RPAP1Q9BWH6 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.4□□□□□ -1.7
RPAP1Q9BWH6 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.4□□□□□ -1.7
RPAP1Q9BWH6 Z82195.1-201ENST00000604558 398 ntBASIC4.4□□□□□ -1.7
RPAP1Q9BWH6 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.4□□□□□ -1.7
RPAP1Q9BWH6 MFSD8-236ENST00000641509 4050 ntBASIC4.4□□□□□ -1.7
RPAP1Q9BWH6 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.4□□□□□ -1.7
RPAP1Q9BWH6 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
RPAP1Q9BWH6 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
RPAP1Q9BWH6 RPS4XP5-202ENST00000449995 1334 ntBASIC4.4□□□□□ -1.71
RPAP1Q9BWH6 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.4□□□□□ -1.71
RPAP1Q9BWH6 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RPAP1Q9BWH6 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.4□□□□□ -1.71
RPAP1Q9BWH6 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
RPAP1Q9BWH6 SNORD9-201ENST00000362566 104 ntBASIC4.4□□□□□ -1.71
RPAP1Q9BWH6 RNU1-33P-201ENST00000364249 162 ntBASIC4.4□□□□□ -1.71
RPAP1Q9BWH6 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.4□□□□□ -1.71
RPAP1Q9BWH6 AL391417.1-201ENST00000404100 426 ntBASIC4.4□□□□□ -1.71
RPAP1Q9BWH6 AL158156.1-201ENST00000422509 473 ntBASIC4.4□□□□□ -1.71
RPAP1Q9BWH6 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.4□□□□□ -1.71
RPAP1Q9BWH6 CACYBPP1-201ENST00000438592 684 ntBASIC4.4□□□□□ -1.71
RPAP1Q9BWH6 CASP3P1-201ENST00000446037 609 ntBASIC4.4□□□□□ -1.71
RPAP1Q9BWH6 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC4.4□□□□□ -1.71
RPAP1Q9BWH6 RBMY2UP-201ENST00000453474 324 ntBASIC4.4□□□□□ -1.71
RPAP1Q9BWH6 MTCO3P20-201ENST00000454926 688 ntBASIC4.4□□□□□ -1.71
RPAP1Q9BWH6 DNAJC19P1-201ENST00000455312 319 ntBASIC4.4□□□□□ -1.71
RPAP1Q9BWH6 AC006511.1-201ENST00000470614 315 ntBASIC4.4□□□□□ -1.71
RPAP1Q9BWH6 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.4□□□□□ -1.71
RPAP1Q9BWH6 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RPAP1Q9BWH6 AC007458.1-201ENST00000542812 373 ntBASIC4.4□□□□□ -1.71
RPAP1Q9BWH6 CBX3P5-201ENST00000552017 521 ntBASIC4.4□□□□□ -1.71
RPAP1Q9BWH6 AC092868.3-201ENST00000560515 784 ntBASIC4.4□□□□□ -1.71
RPAP1Q9BWH6 MIR4298-201ENST00000584380 73 ntBASIC4.4□□□□□ -1.71
RPAP1Q9BWH6 AC005021.1-201ENST00000608730 355 ntBASIC4.4□□□□□ -1.71
RPAP1Q9BWH6 AP001002.2-201ENST00000625137 386 ntBASIC4.4□□□□□ -1.71
RPAP1Q9BWH6 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RPAP1Q9BWH6 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RPAP1Q9BWH6 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.39□□□□□ -1.71
RPAP1Q9BWH6 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
RPAP1Q9BWH6 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RPAP1Q9BWH6 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
RPAP1Q9BWH6 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
RPAP1Q9BWH6 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
RPAP1Q9BWH6 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.39□□□□□ -1.71
RPAP1Q9BWH6 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.39□□□□□ -1.71
RPAP1Q9BWH6 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RPAP1Q9BWH6 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
RPAP1Q9BWH6 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
RPAP1Q9BWH6 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RPAP1Q9BWH6 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RPAP1Q9BWH6 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RPAP1Q9BWH6 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RPAP1Q9BWH6 Y_RNA.111-201ENST00000363248 100 ntBASIC4.39□□□□□ -1.71
RPAP1Q9BWH6 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.39□□□□□ -1.71
RPAP1Q9BWH6 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
RPAP1Q9BWH6 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
RPAP1Q9BWH6 MTHFD2P2-201ENST00000407725 247 ntBASIC4.39□□□□□ -1.71
RPAP1Q9BWH6 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.39□□□□□ -1.71
RPAP1Q9BWH6 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.39□□□□□ -1.71
RPAP1Q9BWH6 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.39□□□□□ -1.71
RPAP1Q9BWH6 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.39□□□□□ -1.71
RPAP1Q9BWH6 NDUFS5P3-201ENST00000450668 321 ntBASIC4.39□□□□□ -1.71
RPAP1Q9BWH6 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.39□□□□□ -1.71
RPAP1Q9BWH6 NPM1P17-201ENST00000479221 602 ntBASIC4.39□□□□□ -1.71
RPAP1Q9BWH6 RN7SL809P-201ENST00000482040 297 ntBASIC4.39□□□□□ -1.71
RPAP1Q9BWH6 AC016550.3-201ENST00000515706 767 ntBASIC4.39□□□□□ -1.71
RPAP1Q9BWH6 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.39□□□□□ -1.71
RPAP1Q9BWH6 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.39□□□□□ -1.71
RPAP1Q9BWH6 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.39□□□□□ -1.71
RPAP1Q9BWH6 MTCO2P22-201ENST00000603246 681 ntBASIC4.39□□□□□ -1.71
RPAP1Q9BWH6 AC243756.2-201ENST00000618406 463 ntBASIC4.39□□□□□ -1.71
RPAP1Q9BWH6 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.39□□□□□ -1.71
RPAP1Q9BWH6 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
RPAP1Q9BWH6 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms