Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 AC139783.2-201ENST00000504847 1145 ntBASIC4.01□□□□□ -1.77
CCM2Q9BSQ5 RNA5SP315-201ENST00000516340 116 ntBASIC4.01□□□□□ -1.77
CCM2Q9BSQ5 RNA5SP312-201ENST00000517068 116 ntBASIC4.01□□□□□ -1.77
CCM2Q9BSQ5 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.01□□□□□ -1.77
CCM2Q9BSQ5 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.01□□□□□ -1.77
CCM2Q9BSQ5 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.01□□□□□ -1.77
CCM2Q9BSQ5 AC019227.1-201ENST00000526902 510 ntBASIC4.01□□□□□ -1.77
CCM2Q9BSQ5 AC091515.1-201ENST00000548110 679 ntBASIC4.01□□□□□ -1.77
CCM2Q9BSQ5 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.01□□□□□ -1.77
CCM2Q9BSQ5 OR4U1P-201ENST00000554958 912 ntBASIC4.01□□□□□ -1.77
CCM2Q9BSQ5 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC4.01□□□□□ -1.77
CCM2Q9BSQ5 AC007224.1-201ENST00000564410 144 ntBASIC4.01□□□□□ -1.77
CCM2Q9BSQ5 CYP2C60P-201ENST00000566088 139 ntBASIC4.01□□□□□ -1.77
CCM2Q9BSQ5 AC079171.1-201ENST00000568788 914 ntBASIC4.01□□□□□ -1.77
CCM2Q9BSQ5 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCM2Q9BSQ5 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.01□□□□□ -1.77
CCM2Q9BSQ5 AC114878.2-201ENST00000604863 1251 ntBASIC4.01□□□□□ -1.77
CCM2Q9BSQ5 BNIP3P4-201ENST00000604946 565 ntBASIC4.01□□□□□ -1.77
CCM2Q9BSQ5 AC099785.1-201ENST00000605697 437 ntBASIC4.01□□□□□ -1.77
CCM2Q9BSQ5 AC007275.1-201ENST00000621243 671 ntBASIC4.01□□□□□ -1.77
CCM2Q9BSQ5 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.01□□□□□ -1.77
CCM2Q9BSQ5 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCM2Q9BSQ5 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.01□□□□□ -1.77
CCM2Q9BSQ5 IQCB2P-201ENST00000401788 1633 ntBASIC4.01□□□□□ -1.77
CCM2Q9BSQ5 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCM2Q9BSQ5 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.01□□□□□ -1.77
CCM2Q9BSQ5 ZNF962P-201ENST00000443465 3140 ntBASIC4.01□□□□□ -1.77
CCM2Q9BSQ5 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCM2Q9BSQ5 AC022031.1-201ENST00000585985 2593 ntBASIC4.01□□□□□ -1.77
CCM2Q9BSQ5 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCM2Q9BSQ5 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCM2Q9BSQ5 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
CCM2Q9BSQ5 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4□□□□□ -1.77
CCM2Q9BSQ5 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCM2Q9BSQ5 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4□□□□□ -1.77
CCM2Q9BSQ5 RNA5SP130-201ENST00000364431 114 ntBASIC4□□□□□ -1.77
CCM2Q9BSQ5 U3.15-201ENST00000365398 212 ntBASIC4□□□□□ -1.77
CCM2Q9BSQ5 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4□□□□□ -1.77
CCM2Q9BSQ5 AC136624.1-201ENST00000400791 413 ntBASIC4□□□□□ -1.77
CCM2Q9BSQ5 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4□□□□□ -1.77
CCM2Q9BSQ5 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4□□□□□ -1.77
CCM2Q9BSQ5 AC115285.1-201ENST00000424879 736 ntBASIC4□□□□□ -1.77
CCM2Q9BSQ5 OR5BE1P-201ENST00000425977 939 ntBASIC4□□□□□ -1.77
CCM2Q9BSQ5 OR5AW1P-201ENST00000426334 1006 ntBASIC4□□□□□ -1.77
CCM2Q9BSQ5 AC004975.1-201ENST00000428733 208 ntBASIC4□□□□□ -1.77
CCM2Q9BSQ5 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4□□□□□ -1.77
CCM2Q9BSQ5 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4□□□□□ -1.77
CCM2Q9BSQ5 AL356276.2-201ENST00000435919 558 ntBASIC4□□□□□ -1.77
CCM2Q9BSQ5 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4□□□□□ -1.77
CCM2Q9BSQ5 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4□□□□□ -1.77
CCM2Q9BSQ5 MRPL35P4-201ENST00000453682 566 ntBASIC4□□□□□ -1.77
CCM2Q9BSQ5 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4□□□□□ -1.77
CCM2Q9BSQ5 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4□□□□□ -1.77
CCM2Q9BSQ5 AC103987.1-201ENST00000473394 348 ntBASIC4□□□□□ -1.77
CCM2Q9BSQ5 AC010683.1-201ENST00000473673 378 ntBASIC4□□□□□ -1.77
CCM2Q9BSQ5 AC011037.1-201ENST00000483964 558 ntBASIC4□□□□□ -1.77
CCM2Q9BSQ5 AC093267.1-201ENST00000489176 961 ntBASIC4□□□□□ -1.77
CCM2Q9BSQ5 AC093801.2-201ENST00000503966 1050 ntBASIC4□□□□□ -1.77
CCM2Q9BSQ5 AC010374.2-201ENST00000512933 535 ntBASIC4□□□□□ -1.77
CCM2Q9BSQ5 PRELID3BP4-201ENST00000515476 571 ntBASIC4□□□□□ -1.77
CCM2Q9BSQ5 MTND1P6-201ENST00000523621 946 ntBASIC4□□□□□ -1.77
CCM2Q9BSQ5 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4□□□□□ -1.77
CCM2Q9BSQ5 AL442163.2-201ENST00000553912 710 ntBASIC4□□□□□ -1.77
CCM2Q9BSQ5 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCM2Q9BSQ5 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4□□□□□ -1.77
CCM2Q9BSQ5 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4□□□□□ -1.77
CCM2Q9BSQ5 AC009101.1-201ENST00000568135 242 ntBASIC4□□□□□ -1.77
CCM2Q9BSQ5 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4□□□□□ -1.77
CCM2Q9BSQ5 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCM2Q9BSQ5 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4□□□□□ -1.77
CCM2Q9BSQ5 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC4□□□□□ -1.77
CCM2Q9BSQ5 AC069304.3-201ENST00000603938 1084 ntBASIC4□□□□□ -1.77
CCM2Q9BSQ5 AC104662.1-201ENST00000604448 511 ntBASIC4□□□□□ -1.77
CCM2Q9BSQ5 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4□□□□□ -1.77
CCM2Q9BSQ5 AF129408.1-201ENST00000608767 431 ntBASIC4□□□□□ -1.77
CCM2Q9BSQ5 RNU6-1192P-201ENST00000612197 107 ntBASIC4□□□□□ -1.77
CCM2Q9BSQ5 RNU6-489P-201ENST00000618289 107 ntBASIC4□□□□□ -1.77
CCM2Q9BSQ5 AC092608.3-201ENST00000625017 386 ntBASIC4□□□□□ -1.77
CCM2Q9BSQ5 OR5BE1P-202ENST00000641168 1176 ntBASIC4□□□□□ -1.77
CCM2Q9BSQ5 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4□□□□□ -1.77
CCM2Q9BSQ5 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4□□□□□ -1.77
CCM2Q9BSQ5 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
CCM2Q9BSQ5 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4□□□□□ -1.77
CCM2Q9BSQ5 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCM2Q9BSQ5 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4□□□□□ -1.77
CCM2Q9BSQ5 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCM2Q9BSQ5 EXOC5P1-201ENST00000510543 1969 ntBASIC4□□□□□ -1.77
CCM2Q9BSQ5 AC097504.1-201ENST00000515103 2415 ntBASIC4□□□□□ -1.77
CCM2Q9BSQ5 CASC19-261ENST00000641853 1638 ntBASIC3.99□□□□□ -1.77
CCM2Q9BSQ5 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCM2Q9BSQ5 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CCM2Q9BSQ5 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCM2Q9BSQ5 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCM2Q9BSQ5 AC046144.1-201ENST00000478559 1853 ntBASIC3.99□□□□□ -1.77
CCM2Q9BSQ5 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.99□□□□□ -1.77
CCM2Q9BSQ5 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCM2Q9BSQ5 AL049737.1-201ENST00000413920 1403 ntBASIC3.99□□□□□ -1.77
CCM2Q9BSQ5 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCM2Q9BSQ5 AL139811.1-201ENST00000424779 2299 ntBASIC3.99□□□□□ -1.77
CCM2Q9BSQ5 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms