Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AL139109.1-201ENST00000455491 297 ntBASIC6.42□□□□□ -1.38
USB1Q9BQ65 RNU7-187P-201ENST00000458985 68 ntBASIC6.42□□□□□ -1.38
USB1Q9BQ65 AC040975.1-201ENST00000472104 316 ntBASIC6.42□□□□□ -1.38
USB1Q9BQ65 AC092436.3-201ENST00000511788 257 ntBASIC6.42□□□□□ -1.38
USB1Q9BQ65 RNU5B-3P-201ENST00000516601 115 ntBASIC6.42□□□□□ -1.38
USB1Q9BQ65 Y_RNA.703-201ENST00000516846 111 ntBASIC6.42□□□□□ -1.38
USB1Q9BQ65 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC6.42□□□□□ -1.38
USB1Q9BQ65 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC6.42□□□□□ -1.38
USB1Q9BQ65 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.42□□□□□ -1.38
USB1Q9BQ65 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC6.42□□□□□ -1.38
USB1Q9BQ65 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC6.42□□□□□ -1.38
USB1Q9BQ65 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC6.42□□□□□ -1.38
USB1Q9BQ65 EEF1B2P1-201ENST00000567221 672 ntBASIC6.42□□□□□ -1.38
USB1Q9BQ65 RN7SL802P-201ENST00000577858 299 ntBASIC6.42□□□□□ -1.38
USB1Q9BQ65 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC6.42□□□□□ -1.38
USB1Q9BQ65 AL136985.2-201ENST00000607372 535 ntBASIC6.42□□□□□ -1.38
USB1Q9BQ65 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.42□□□□□ -1.38
USB1Q9BQ65 AC211433.3-201ENST00000623770 375 ntBASIC6.42□□□□□ -1.38
USB1Q9BQ65 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
USB1Q9BQ65 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
USB1Q9BQ65 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
USB1Q9BQ65 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
USB1Q9BQ65 SAMMSON-203ENST00000641005 2168 ntBASIC6.42□□□□□ -1.38
USB1Q9BQ65 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
USB1Q9BQ65 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC6.42□□□□□ -1.38
USB1Q9BQ65 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
USB1Q9BQ65 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
USB1Q9BQ65 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
USB1Q9BQ65 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
USB1Q9BQ65 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
USB1Q9BQ65 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
USB1Q9BQ65 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
USB1Q9BQ65 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
USB1Q9BQ65 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
USB1Q9BQ65 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.41□□□□□ -1.38
USB1Q9BQ65 ANKRD36BP1-201ENST00000358576 1779 ntBASIC6.41□□□□□ -1.38
USB1Q9BQ65 EIF2AP4-201ENST00000424793 1781 ntBASIC6.41□□□□□ -1.38
USB1Q9BQ65 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC6.41□□□□□ -1.38
USB1Q9BQ65 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
USB1Q9BQ65 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
USB1Q9BQ65 AC010168.2-201ENST00000562691 5428 ntBASIC6.41□□□□□ -1.38
USB1Q9BQ65 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
USB1Q9BQ65 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.41□□□□□ -1.38
USB1Q9BQ65 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
USB1Q9BQ65 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.41□□□□□ -1.38
USB1Q9BQ65 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
USB1Q9BQ65 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
USB1Q9BQ65 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
USB1Q9BQ65 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
USB1Q9BQ65 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
USB1Q9BQ65 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
USB1Q9BQ65 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.41□□□□□ -1.38
USB1Q9BQ65 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.41□□□□□ -1.38
USB1Q9BQ65 RNU6-1284P-201ENST00000363701 100 ntBASIC6.41□□□□□ -1.38
USB1Q9BQ65 RNY3P11-201ENST00000364153 102 ntBASIC6.41□□□□□ -1.38
USB1Q9BQ65 Y_RNA.274-201ENST00000364714 101 ntBASIC6.41□□□□□ -1.38
USB1Q9BQ65 RNA5SP302-201ENST00000364896 100 ntBASIC6.41□□□□□ -1.38
USB1Q9BQ65 Y_RNA.464-201ENST00000384282 110 ntBASIC6.41□□□□□ -1.38
USB1Q9BQ65 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC6.41□□□□□ -1.38
USB1Q9BQ65 AL353997.1-201ENST00000432936 108 ntBASIC6.41□□□□□ -1.38
USB1Q9BQ65 AC073410.1-201ENST00000435125 589 ntBASIC6.41□□□□□ -1.38
USB1Q9BQ65 PPIAP3-201ENST00000450588 505 ntBASIC6.41□□□□□ -1.38
USB1Q9BQ65 AC022080.2-201ENST00000452932 533 ntBASIC6.41□□□□□ -1.38
USB1Q9BQ65 RN7SL180P-201ENST00000466769 294 ntBASIC6.41□□□□□ -1.38
USB1Q9BQ65 AC084878.1-201ENST00000480555 648 ntBASIC6.41□□□□□ -1.38
USB1Q9BQ65 AC025271.1-201ENST00000485045 429 ntBASIC6.41□□□□□ -1.38
USB1Q9BQ65 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
USB1Q9BQ65 LEF1-218ENST00000512172 598 ntTSL 2 BASIC6.41□□□□□ -1.38
USB1Q9BQ65 IGHVII-60-1-201ENST00000519079 256 ntBASIC6.41□□□□□ -1.38
USB1Q9BQ65 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC6.41□□□□□ -1.38
USB1Q9BQ65 AP001922.4-201ENST00000526967 290 ntBASIC6.41□□□□□ -1.38
USB1Q9BQ65 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC6.41□□□□□ -1.38
USB1Q9BQ65 NQO1-205ENST00000561500 891 ntTSL 3 BASIC6.41□□□□□ -1.38
USB1Q9BQ65 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC6.41□□□□□ -1.38
USB1Q9BQ65 MIR548AI-201ENST00000579940 88 ntBASIC6.41□□□□□ -1.38
USB1Q9BQ65 AL670379.6-201ENST00000603753 252 ntBASIC6.41□□□□□ -1.38
USB1Q9BQ65 AC020765.1-201ENST00000604296 328 ntBASIC6.41□□□□□ -1.38
USB1Q9BQ65 AL670379.1-201ENST00000604752 252 ntBASIC6.41□□□□□ -1.38
USB1Q9BQ65 AL670379.5-201ENST00000605253 252 ntBASIC6.41□□□□□ -1.38
USB1Q9BQ65 AL670379.8-201ENST00000605353 252 ntBASIC6.41□□□□□ -1.38
USB1Q9BQ65 AL670379.7-201ENST00000605823 252 ntBASIC6.41□□□□□ -1.38
USB1Q9BQ65 AL589994.2-201ENST00000621124 579 ntBASIC6.41□□□□□ -1.38
USB1Q9BQ65 AC099667.1-201ENST00000624222 469 ntBASIC6.41□□□□□ -1.38
USB1Q9BQ65 AC127459.3-201ENST00000624328 466 ntBASIC6.41□□□□□ -1.38
USB1Q9BQ65 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC6.41□□□□□ -1.38
USB1Q9BQ65 AC073488.2-201ENST00000631903 751 ntBASIC6.41□□□□□ -1.38
USB1Q9BQ65 MIR665-201ENST00000635949 72 ntBASIC6.41□□□□□ -1.38
USB1Q9BQ65 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
USB1Q9BQ65 AP000432.2-201ENST00000624164 2048 ntBASIC6.41□□□□□ -1.38
USB1Q9BQ65 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
USB1Q9BQ65 AL359263.1-201ENST00000441188 2796 ntBASIC6.41□□□□□ -1.38
USB1Q9BQ65 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.41□□□□□ -1.38
USB1Q9BQ65 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
USB1Q9BQ65 ARHGAP42P4-201ENST00000549782 2934 ntBASIC6.41□□□□□ -1.38
USB1Q9BQ65 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
USB1Q9BQ65 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.41□□□□□ -1.38
USB1Q9BQ65 AP002800.1-201ENST00000624982 2225 ntBASIC6.41□□□□□ -1.38
USB1Q9BQ65 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC6.41□□□□□ -1.38
USB1Q9BQ65 AC090643.1-201ENST00000623600 3100 ntBASIC6.41□□□□□ -1.38
USB1Q9BQ65 AC073365.1-203ENST00000641055 1992 ntBASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms