Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 RSU1P3-201ENST00000412878 835 ntBASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 AC104837.2-201ENST00000427236 424 ntBASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 GTF2IP20-201ENST00000431663 360 ntBASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 YWHAZP8-201ENST00000436935 731 ntBASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 RPL36AP15-201ENST00000444514 266 ntBASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 EEF1B2P6-201ENST00000445713 673 ntBASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 AC002381.1-201ENST00000447049 280 ntBASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 AC090602.1-201ENST00000469695 252 ntBASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 RPL21P6-201ENST00000479171 504 ntBASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 NIFKP7-201ENST00000503365 834 ntBASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 AC111000.3-201ENST00000508057 576 ntBASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 SCARNA15.1-201ENST00000516384 125 ntBASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 Vault.3-201ENST00000516676 95 ntBASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 RNU6-201P-201ENST00000517100 61 ntBASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 IGKV3D-34-201ENST00000522638 302 ntBASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 MRPS16P1-201ENST00000523462 412 ntBASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 HSPA8P13-201ENST00000523715 472 ntBASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 AC022832.1-201ENST00000530718 645 ntBASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 AC010547.6-201ENST00000571789 193 ntBASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 AC018809.2-201ENST00000602436 3823 ntBASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 AC011468.4-201ENST00000603942 409 ntBASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 HSPE1P14-201ENST00000605812 302 ntBASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 AL355480.1-201ENST00000629041 99 ntBASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PTCHD1Q96NR3 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PTCHD1Q96NR3 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PTCHD1Q96NR3 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.35□□□□□ -1.55
PTCHD1Q96NR3 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
PTCHD1Q96NR3 SRRM1P3-201ENST00000426911 2678 ntBASIC5.35□□□□□ -1.55
PTCHD1Q96NR3 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PTCHD1Q96NR3 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
PTCHD1Q96NR3 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PTCHD1Q96NR3 AC025470.1-201ENST00000510053 2032 ntBASIC5.35□□□□□ -1.55
PTCHD1Q96NR3 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.35□□□□□ -1.55
PTCHD1Q96NR3 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.35□□□□□ -1.55
PTCHD1Q96NR3 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
PTCHD1Q96NR3 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
PTCHD1Q96NR3 OR5J1P-201ENST00000313544 939 ntBASIC5.35□□□□□ -1.55
PTCHD1Q96NR3 Y_RNA.72-201ENST00000362894 103 ntBASIC5.35□□□□□ -1.55
PTCHD1Q96NR3 RN7SKP69-201ENST00000365390 305 ntBASIC5.35□□□□□ -1.55
PTCHD1Q96NR3 MIR130A-201ENST00000385274 89 ntBASIC5.35□□□□□ -1.55
PTCHD1Q96NR3 RNA5SP91-201ENST00000390902 119 ntBASIC5.35□□□□□ -1.55
PTCHD1Q96NR3 EIF5P1-201ENST00000400019 1231 ntBASIC5.35□□□□□ -1.55
PTCHD1Q96NR3 RN7SKP286-201ENST00000410894 299 ntBASIC5.35□□□□□ -1.55
PTCHD1Q96NR3 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC5.35□□□□□ -1.55
PTCHD1Q96NR3 AC007390.1-201ENST00000415722 356 ntBASIC5.35□□□□□ -1.55
PTCHD1Q96NR3 OR10T1P-201ENST00000424327 947 ntBASIC5.35□□□□□ -1.55
PTCHD1Q96NR3 OR51AB1P-201ENST00000429046 620 ntBASIC5.35□□□□□ -1.55
PTCHD1Q96NR3 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.35□□□□□ -1.55
PTCHD1Q96NR3 OR52B5P-201ENST00000435337 951 ntBASIC5.35□□□□□ -1.55
PTCHD1Q96NR3 KRT8P51-201ENST00000438938 274 ntBASIC5.35□□□□□ -1.55
PTCHD1Q96NR3 FAM103A2P-201ENST00000444122 354 ntBASIC5.35□□□□□ -1.55
PTCHD1Q96NR3 AC004980.3-201ENST00000447046 365 ntBASIC5.35□□□□□ -1.55
PTCHD1Q96NR3 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PTCHD1Q96NR3 RPL12P39-201ENST00000455456 496 ntBASIC5.35□□□□□ -1.55
PTCHD1Q96NR3 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC5.35□□□□□ -1.55
PTCHD1Q96NR3 RPL39P36-201ENST00000490784 156 ntBASIC5.35□□□□□ -1.55
PTCHD1Q96NR3 AC090453.1-201ENST00000495560 436 ntBASIC5.35□□□□□ -1.55
PTCHD1Q96NR3 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC5.35□□□□□ -1.55
PTCHD1Q96NR3 AC106872.4-201ENST00000510050 523 ntBASIC5.35□□□□□ -1.55
PTCHD1Q96NR3 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.35□□□□□ -1.55
PTCHD1Q96NR3 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.35□□□□□ -1.55
PTCHD1Q96NR3 Y_RNA.701-201ENST00000516812 110 ntBASIC5.35□□□□□ -1.55
PTCHD1Q96NR3 RNU6-714P-201ENST00000516963 103 ntBASIC5.35□□□□□ -1.55
PTCHD1Q96NR3 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC5.35□□□□□ -1.55
PTCHD1Q96NR3 AC018442.3-201ENST00000523025 183 ntBASIC5.35□□□□□ -1.55
PTCHD1Q96NR3 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.35□□□□□ -1.55
PTCHD1Q96NR3 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.35□□□□□ -1.55
PTCHD1Q96NR3 CYCSP28-201ENST00000534284 321 ntBASIC5.35□□□□□ -1.55
PTCHD1Q96NR3 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.35□□□□□ -1.55
PTCHD1Q96NR3 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.35□□□□□ -1.55
PTCHD1Q96NR3 AC126615.2-201ENST00000553003 515 ntBASIC5.35□□□□□ -1.55
PTCHD1Q96NR3 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 144.7 ms