Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.38□□□□□ -1.55
TOPBP1Q92547 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC5.38□□□□□ -1.55
TOPBP1Q92547 NRBF2P5-201ENST00000603087 788 ntBASIC5.38□□□□□ -1.55
TOPBP1Q92547 AC136601.2-201ENST00000604356 474 ntBASIC5.38□□□□□ -1.55
TOPBP1Q92547 AC015849.2-201ENST00000605738 409 ntBASIC5.38□□□□□ -1.55
TOPBP1Q92547 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC5.38□□□□□ -1.55
TOPBP1Q92547 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.38□□□□□ -1.55
TOPBP1Q92547 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TOPBP1Q92547 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
TOPBP1Q92547 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.38□□□□□ -1.55
TOPBP1Q92547 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
TOPBP1Q92547 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TOPBP1Q92547 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.38□□□□□ -1.55
TOPBP1Q92547 AC012065.2-201ENST00000421295 375 ntBASIC5.38□□□□□ -1.55
TOPBP1Q92547 AC093156.1-201ENST00000440382 670 ntBASIC5.38□□□□□ -1.55
TOPBP1Q92547 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC5.38□□□□□ -1.55
TOPBP1Q92547 AC008264.1-201ENST00000447612 367 ntBASIC5.38□□□□□ -1.55
TOPBP1Q92547 AL133477.1-201ENST00000457472 514 ntBASIC5.38□□□□□ -1.55
TOPBP1Q92547 AC069499.1-201ENST00000489433 509 ntBASIC5.38□□□□□ -1.55
TOPBP1Q92547 RNU4ATAC6P-201ENST00000516592 126 ntBASIC5.38□□□□□ -1.55
TOPBP1Q92547 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC5.38□□□□□ -1.55
TOPBP1Q92547 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC5.38□□□□□ -1.55
TOPBP1Q92547 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TOPBP1Q92547 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC5.38□□□□□ -1.55
TOPBP1Q92547 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC5.38□□□□□ -1.55
TOPBP1Q92547 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC5.38□□□□□ -1.55
TOPBP1Q92547 BCLAF1P1-201ENST00000505813 2752 ntBASIC5.37□□□□□ -1.55
TOPBP1Q92547 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TOPBP1Q92547 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TOPBP1Q92547 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
TOPBP1Q92547 SNORD74.4-201ENST00000364129 80 ntBASIC5.37□□□□□ -1.55
TOPBP1Q92547 XGY1-201ENST00000381172 446 ntBASIC5.37□□□□□ -1.55
TOPBP1Q92547 RPL23AP82-202ENST00000427528 469 ntBASIC5.37□□□□□ -1.55
TOPBP1Q92547 USP12PY-201ENST00000427677 1064 ntBASIC5.37□□□□□ -1.55
TOPBP1Q92547 IFNNP1-201ENST00000429219 553 ntBASIC5.37□□□□□ -1.55
TOPBP1Q92547 AF228730.2-201ENST00000438784 848 ntBASIC5.37□□□□□ -1.55
TOPBP1Q92547 SLC31A1P1-201ENST00000451221 567 ntBASIC5.37□□□□□ -1.55
TOPBP1Q92547 ELOCP23-201ENST00000452014 332 ntBASIC5.37□□□□□ -1.55
TOPBP1Q92547 AL109933.2-201ENST00000452651 260 ntBASIC5.37□□□□□ -1.55
TOPBP1Q92547 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC5.37□□□□□ -1.55
TOPBP1Q92547 CENPBD1P1-201ENST00000464061 469 ntBASIC5.37□□□□□ -1.55
TOPBP1Q92547 AC087312.1-201ENST00000471411 480 ntBASIC5.37□□□□□ -1.55
TOPBP1Q92547 RPS3AP50-201ENST00000487064 803 ntBASIC5.37□□□□□ -1.55
TOPBP1Q92547 RPL23AP73-201ENST00000492507 471 ntBASIC5.37□□□□□ -1.55
TOPBP1Q92547 AC009812.2-201ENST00000517657 457 ntBASIC5.37□□□□□ -1.55
TOPBP1Q92547 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC5.37□□□□□ -1.55
TOPBP1Q92547 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC5.37□□□□□ -1.55
TOPBP1Q92547 AC104763.2-201ENST00000604179 382 ntBASIC5.37□□□□□ -1.55
TOPBP1Q92547 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
TOPBP1Q92547 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC5.37□□□□□ -1.55
TOPBP1Q92547 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.36□□□□□ -1.55
TOPBP1Q92547 AC073325.2-201ENST00000339545 159 ntBASIC5.36□□□□□ -1.55
TOPBP1Q92547 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
TOPBP1Q92547 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
TOPBP1Q92547 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.36□□□□□ -1.55
TOPBP1Q92547 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.36□□□□□ -1.55
TOPBP1Q92547 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC5.36□□□□□ -1.55
TOPBP1Q92547 MIR622-201ENST00000638396 96 ntBASIC5.36□□□□□ -1.55
TOPBP1Q92547 AL451142.2-201ENST00000429076 2090 ntBASIC5.36□□□□□ -1.55
TOPBP1Q92547 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TOPBP1Q92547 TCP1P3-201ENST00000414406 1498 ntBASIC5.36□□□□□ -1.55
TOPBP1Q92547 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC5.35□□□□□ -1.55
TOPBP1Q92547 THAP12P8-201ENST00000447914 2115 ntBASIC5.35□□□□□ -1.55
TOPBP1Q92547 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
TOPBP1Q92547 MIR93-201ENST00000385024 80 ntBASIC5.35□□□□□ -1.55
TOPBP1Q92547 HMGN2P8-201ENST00000391458 268 ntBASIC5.35□□□□□ -1.55
TOPBP1Q92547 AC073069.1-201ENST00000428657 441 ntBASIC5.35□□□□□ -1.55
TOPBP1Q92547 FTLP19-201ENST00000433300 394 ntBASIC5.35□□□□□ -1.55
TOPBP1Q92547 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.35□□□□□ -1.55
TOPBP1Q92547 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.35□□□□□ -1.55
TOPBP1Q92547 RPS26P15-201ENST00000488067 348 ntBASIC5.35□□□□□ -1.55
TOPBP1Q92547 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.35□□□□□ -1.55
TOPBP1Q92547 AL096803.3-201ENST00000609032 532 ntBASIC5.35□□□□□ -1.55
TOPBP1Q92547 AC063952.1-203ENST00000634410 658 ntBASIC5.35□□□□□ -1.55
TOPBP1Q92547 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.35□□□□□ -1.55
TOPBP1Q92547 AC125336.1-201ENST00000508893 2827 ntBASIC5.35□□□□□ -1.55
TOPBP1Q92547 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TOPBP1Q92547 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC5.35□□□□□ -1.55
TOPBP1Q92547 RNA5SP184-201ENST00000411071 108 ntBASIC5.34□□□□□ -1.55
TOPBP1Q92547 AC005229.2-201ENST00000456995 399 ntBASIC5.34□□□□□ -1.55
TOPBP1Q92547 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC5.34□□□□□ -1.55
TOPBP1Q92547 COX6B1P6-201ENST00000522347 255 ntBASIC5.34□□□□□ -1.55
TOPBP1Q92547 AC015917.1-201ENST00000579654 510 ntBASIC5.34□□□□□ -1.55
TOPBP1Q92547 VN1R90P-201ENST00000595717 726 ntBASIC5.34□□□□□ -1.55
TOPBP1Q92547 PCA3_2.1-201ENST00000612507 409 ntBASIC5.34□□□□□ -1.55
TOPBP1Q92547 AC006484.1-201ENST00000435086 1884 ntBASIC5.34□□□□□ -1.55
TOPBP1Q92547 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
TOPBP1Q92547 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.34□□□□□ -1.56
TOPBP1Q92547 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.56
TOPBP1Q92547 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
TOPBP1Q92547 SNORA71.1-201ENST00000364523 117 ntBASIC5.33□□□□□ -1.56
TOPBP1Q92547 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC5.33□□□□□ -1.56
TOPBP1Q92547 MIR1261-201ENST00000408659 82 ntBASIC5.33□□□□□ -1.56
TOPBP1Q92547 AL139413.1-201ENST00000421309 217 ntBASIC5.33□□□□□ -1.56
TOPBP1Q92547 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.33□□□□□ -1.56
TOPBP1Q92547 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC5.33□□□□□ -1.56
TOPBP1Q92547 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.33□□□□□ -1.56
TOPBP1Q92547 KRTAP19-11P-201ENST00000439851 104 ntBASIC5.33□□□□□ -1.56
TOPBP1Q92547 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.33□□□□□ -1.56
TOPBP1Q92547 RPL21P6-201ENST00000479171 504 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 181.5 ms