Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 AC139769.3-201ENST00000618383 175 ntBASIC3.09□□□□□ -1.91
RTN4IP1Q8WWV3 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RTN4IP1Q8WWV3 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.09□□□□□ -1.91
RTN4IP1Q8WWV3 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
RTN4IP1Q8WWV3 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
RTN4IP1Q8WWV3 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
RTN4IP1Q8WWV3 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.08□□□□□ -1.92
RTN4IP1Q8WWV3 AL139811.1-201ENST00000424779 2299 ntBASIC3.08□□□□□ -1.92
RTN4IP1Q8WWV3 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.08□□□□□ -1.92
RTN4IP1Q8WWV3 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
RTN4IP1Q8WWV3 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
RTN4IP1Q8WWV3 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
RTN4IP1Q8WWV3 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
RTN4IP1Q8WWV3 FAM91A3P-201ENST00000456826 2544 ntBASIC3.08□□□□□ -1.92
RTN4IP1Q8WWV3 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
RTN4IP1Q8WWV3 MIR124-3-201ENST00000384866 87 ntBASIC3.08□□□□□ -1.92
RTN4IP1Q8WWV3 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
RTN4IP1Q8WWV3 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
RTN4IP1Q8WWV3 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RTN4IP1Q8WWV3 AL356057.1-202ENST00000402263 756 ntBASIC3.08□□□□□ -1.92
RTN4IP1Q8WWV3 AL136116.1-201ENST00000403591 381 ntBASIC3.08□□□□□ -1.92
RTN4IP1Q8WWV3 SNORA3.3-201ENST00000408712 125 ntBASIC3.08□□□□□ -1.92
RTN4IP1Q8WWV3 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.08□□□□□ -1.92
RTN4IP1Q8WWV3 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.08□□□□□ -1.92
RTN4IP1Q8WWV3 PTP4A1P5-201ENST00000420305 455 ntBASIC3.08□□□□□ -1.92
RTN4IP1Q8WWV3 NDUFB1P1-201ENST00000435191 180 ntBASIC3.08□□□□□ -1.92
RTN4IP1Q8WWV3 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.08□□□□□ -1.92
RTN4IP1Q8WWV3 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.08□□□□□ -1.92
RTN4IP1Q8WWV3 HMGN2P7-201ENST00000456186 273 ntBASIC3.08□□□□□ -1.92
RTN4IP1Q8WWV3 RNU7-170P-201ENST00000459303 61 ntBASIC3.08□□□□□ -1.92
RTN4IP1Q8WWV3 RPL9P32-201ENST00000464118 620 ntBASIC3.08□□□□□ -1.92
RTN4IP1Q8WWV3 AC025181.1-201ENST00000477507 416 ntBASIC3.08□□□□□ -1.92
RTN4IP1Q8WWV3 ACTG1P13-201ENST00000486987 1043 ntBASIC3.08□□□□□ -1.92
RTN4IP1Q8WWV3 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.08□□□□□ -1.92
RTN4IP1Q8WWV3 AL139099.1-201ENST00000497398 403 ntBASIC3.08□□□□□ -1.92
RTN4IP1Q8WWV3 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.08□□□□□ -1.92
RTN4IP1Q8WWV3 PRELID3BP5-201ENST00000508612 460 ntBASIC3.08□□□□□ -1.92
RTN4IP1Q8WWV3 MTND2P31-201ENST00000512602 616 ntBASIC3.08□□□□□ -1.92
RTN4IP1Q8WWV3 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.08□□□□□ -1.92
RTN4IP1Q8WWV3 AC022790.1-201ENST00000522872 204 ntBASIC3.08□□□□□ -1.92
RTN4IP1Q8WWV3 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.08□□□□□ -1.92
RTN4IP1Q8WWV3 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.08□□□□□ -1.92
RTN4IP1Q8WWV3 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
RTN4IP1Q8WWV3 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.08□□□□□ -1.92
RTN4IP1Q8WWV3 AC040174.2-201ENST00000602701 465 ntBASIC3.08□□□□□ -1.92
RTN4IP1Q8WWV3 AC067959.1-201ENST00000604334 379 ntBASIC3.08□□□□□ -1.92
RTN4IP1Q8WWV3 AL365503.1-201ENST00000605247 905 ntBASIC3.08□□□□□ -1.92
RTN4IP1Q8WWV3 AL450270.1-201ENST00000606160 391 ntBASIC3.08□□□□□ -1.92
RTN4IP1Q8WWV3 SNORA62.6-201ENST00000606322 83 ntBASIC3.08□□□□□ -1.92
RTN4IP1Q8WWV3 AC103710.3-201ENST00000608157 948 ntBASIC3.08□□□□□ -1.92
RTN4IP1Q8WWV3 AC079684.1-201ENST00000621405 437 ntBASIC3.08□□□□□ -1.92
RTN4IP1Q8WWV3 FP236240.3-201ENST00000623061 327 ntBASIC3.08□□□□□ -1.92
RTN4IP1Q8WWV3 AC116563.2-201ENST00000624751 535 ntBASIC3.08□□□□□ -1.92
RTN4IP1Q8WWV3 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.08□□□□□ -1.92
RTN4IP1Q8WWV3 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC3.08□□□□□ -1.92
RTN4IP1Q8WWV3 CDRT1-208ENST00000630868 794 ntBASIC3.08□□□□□ -1.92
RTN4IP1Q8WWV3 AL732372.2-225ENST00000642124 456 ntBASIC3.08□□□□□ -1.92
RTN4IP1Q8WWV3 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RTN4IP1Q8WWV3 MTND4P21-201ENST00000453886 1357 ntBASIC3.08□□□□□ -1.92
RTN4IP1Q8WWV3 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.08□□□□□ -1.92
RTN4IP1Q8WWV3 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RTN4IP1Q8WWV3 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RTN4IP1Q8WWV3 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
RTN4IP1Q8WWV3 MFSD8-236ENST00000641509 4050 ntBASIC3.08□□□□□ -1.92
RTN4IP1Q8WWV3 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
RTN4IP1Q8WWV3 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
RTN4IP1Q8WWV3 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.07□□□□□ -1.92
RTN4IP1Q8WWV3 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
RTN4IP1Q8WWV3 RNA5SP235-201ENST00000365411 114 ntBASIC3.07□□□□□ -1.92
RTN4IP1Q8WWV3 RN7SKP263-201ENST00000411194 309 ntBASIC3.07□□□□□ -1.92
RTN4IP1Q8WWV3 USP9YP19-201ENST00000412165 485 ntBASIC3.07□□□□□ -1.92
RTN4IP1Q8WWV3 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.07□□□□□ -1.92
RTN4IP1Q8WWV3 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC3.07□□□□□ -1.92
RTN4IP1Q8WWV3 ARL2BPP3-201ENST00000421226 480 ntBASIC3.07□□□□□ -1.92
RTN4IP1Q8WWV3 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.07□□□□□ -1.92
RTN4IP1Q8WWV3 MORF4L1P7-201ENST00000426038 703 ntBASIC3.07□□□□□ -1.92
RTN4IP1Q8WWV3 AL390879.2-203ENST00000426943 1121 ntBASIC3.07□□□□□ -1.92
RTN4IP1Q8WWV3 AL158071.1-201ENST00000430315 461 ntBASIC3.07□□□□□ -1.92
RTN4IP1Q8WWV3 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.07□□□□□ -1.92
RTN4IP1Q8WWV3 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.07□□□□□ -1.92
RTN4IP1Q8WWV3 AL590762.3-201ENST00000436372 640 ntBASIC3.07□□□□□ -1.92
RTN4IP1Q8WWV3 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.07□□□□□ -1.92
RTN4IP1Q8WWV3 SETD6P1-201ENST00000444575 317 ntBASIC3.07□□□□□ -1.92
RTN4IP1Q8WWV3 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.07□□□□□ -1.92
RTN4IP1Q8WWV3 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC3.07□□□□□ -1.92
RTN4IP1Q8WWV3 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.07□□□□□ -1.92
RTN4IP1Q8WWV3 MTND2P6-201ENST00000455337 1030 ntBASIC3.07□□□□□ -1.92
RTN4IP1Q8WWV3 RPL23AP12-201ENST00000467573 473 ntBASIC3.07□□□□□ -1.92
RTN4IP1Q8WWV3 AC018635.1-201ENST00000468292 1030 ntBASIC3.07□□□□□ -1.92
RTN4IP1Q8WWV3 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC3.07□□□□□ -1.92
RTN4IP1Q8WWV3 AC103987.1-201ENST00000473394 348 ntBASIC3.07□□□□□ -1.92
RTN4IP1Q8WWV3 AC108729.2-201ENST00000476543 840 ntBASIC3.07□□□□□ -1.92
RTN4IP1Q8WWV3 RN7SL132P-201ENST00000478131 296 ntBASIC3.07□□□□□ -1.92
RTN4IP1Q8WWV3 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.07□□□□□ -1.92
RTN4IP1Q8WWV3 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
RTN4IP1Q8WWV3 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.07□□□□□ -1.92
RTN4IP1Q8WWV3 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
RTN4IP1Q8WWV3 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
RTN4IP1Q8WWV3 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.07□□□□□ -1.92
RTN4IP1Q8WWV3 AC004923.2-201ENST00000529649 369 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms