Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NPAS4Q8IUM7 AC090971.4-201ENST00000560291 1800 ntBASIC6.18□□□□□ -1.42
NPAS4Q8IUM7 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.18□□□□□ -1.42
NPAS4Q8IUM7 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
NPAS4Q8IUM7 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.17□□□□□ -1.42
NPAS4Q8IUM7 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NPAS4Q8IUM7 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NPAS4Q8IUM7 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NPAS4Q8IUM7 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.17□□□□□ -1.42
NPAS4Q8IUM7 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
NPAS4Q8IUM7 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC6.17□□□□□ -1.42
NPAS4Q8IUM7 AC006511.3-201ENST00000624929 1783 ntBASIC6.17□□□□□ -1.42
NPAS4Q8IUM7 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.17□□□□□ -1.42
NPAS4Q8IUM7 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NPAS4Q8IUM7 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NPAS4Q8IUM7 Y_RNA.234-201ENST00000364409 97 ntBASIC6.17□□□□□ -1.42
NPAS4Q8IUM7 RNU6-1207P-201ENST00000384343 107 ntBASIC6.17□□□□□ -1.42
NPAS4Q8IUM7 MIR223-201ENST00000385204 110 ntBASIC6.17□□□□□ -1.42
NPAS4Q8IUM7 AP003170.5-201ENST00000397185 335 ntBASIC6.17□□□□□ -1.42
NPAS4Q8IUM7 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC6.17□□□□□ -1.42
NPAS4Q8IUM7 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC6.17□□□□□ -1.42
NPAS4Q8IUM7 OR4F13P-201ENST00000428478 931 ntBASIC6.17□□□□□ -1.42
NPAS4Q8IUM7 RPL31P35-201ENST00000431058 377 ntBASIC6.17□□□□□ -1.42
NPAS4Q8IUM7 RPS27P18-201ENST00000431701 247 ntBASIC6.17□□□□□ -1.42
NPAS4Q8IUM7 AC119618.1-201ENST00000434191 222 ntBASIC6.17□□□□□ -1.42
NPAS4Q8IUM7 AC114495.1-201ENST00000441274 436 ntBASIC6.17□□□□□ -1.42
NPAS4Q8IUM7 USP9YP15-201ENST00000442391 422 ntBASIC6.17□□□□□ -1.42
NPAS4Q8IUM7 AC019185.1-201ENST00000442718 389 ntBASIC6.17□□□□□ -1.42
NPAS4Q8IUM7 AC079448.1-201ENST00000449377 373 ntBASIC6.17□□□□□ -1.42
NPAS4Q8IUM7 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC6.17□□□□□ -1.42
NPAS4Q8IUM7 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.17□□□□□ -1.42
NPAS4Q8IUM7 COX6B1P2-201ENST00000489624 230 ntBASIC6.17□□□□□ -1.42
NPAS4Q8IUM7 HMGB1P21-201ENST00000502313 581 ntBASIC6.17□□□□□ -1.42
NPAS4Q8IUM7 AC105914.1-201ENST00000511798 226 ntBASIC6.17□□□□□ -1.42
NPAS4Q8IUM7 AC016065.2-201ENST00000514530 444 ntBASIC6.17□□□□□ -1.42
NPAS4Q8IUM7 CENPUP1-201ENST00000526649 1202 ntBASIC6.17□□□□□ -1.42
NPAS4Q8IUM7 FAM92A1P1-201ENST00000528023 890 ntBASIC6.17□□□□□ -1.42
NPAS4Q8IUM7 AL512310.1-201ENST00000548639 172 ntBASIC6.17□□□□□ -1.42
NPAS4Q8IUM7 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.17□□□□□ -1.42
NPAS4Q8IUM7 HAUS8P1-201ENST00000549005 542 ntBASIC6.17□□□□□ -1.42
NPAS4Q8IUM7 AC126615.2-201ENST00000553003 515 ntBASIC6.17□□□□□ -1.42
NPAS4Q8IUM7 AL157687.1-201ENST00000554853 619 ntBASIC6.17□□□□□ -1.42
NPAS4Q8IUM7 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC6.17□□□□□ -1.42
NPAS4Q8IUM7 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.17□□□□□ -1.42
NPAS4Q8IUM7 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC6.17□□□□□ -1.42
NPAS4Q8IUM7 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.17□□□□□ -1.42
NPAS4Q8IUM7 MIR4301-201ENST00000577203 66 ntBASIC6.17□□□□□ -1.42
NPAS4Q8IUM7 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC6.17□□□□□ -1.42
NPAS4Q8IUM7 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC6.17□□□□□ -1.42
NPAS4Q8IUM7 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC6.17□□□□□ -1.42
NPAS4Q8IUM7 AC012507.3-201ENST00000603556 477 ntBASIC6.17□□□□□ -1.42
NPAS4Q8IUM7 AL732618.1-201ENST00000623251 301 ntBASIC6.17□□□□□ -1.42
NPAS4Q8IUM7 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
NPAS4Q8IUM7 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
NPAS4Q8IUM7 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.17□□□□□ -1.42
NPAS4Q8IUM7 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NPAS4Q8IUM7 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
NPAS4Q8IUM7 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NPAS4Q8IUM7 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NPAS4Q8IUM7 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NPAS4Q8IUM7 RAD17P2-201ENST00000451754 1977 ntBASIC6.17□□□□□ -1.42
NPAS4Q8IUM7 TTC41P-205ENST00000551270 3963 ntBASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 AP000432.2-201ENST00000624164 2048 ntBASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 AC087516.1-201ENST00000561236 2428 ntBASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 AC006026.1-201ENST00000444025 1803 ntBASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 OR4K15-201ENST00000305051 1216 ntBASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 RNA5SP183-201ENST00000362452 119 ntBASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 RNU6-1085P-201ENST00000363576 107 ntBASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 Y_RNA.509-201ENST00000384506 99 ntBASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 RNU2-15P-201ENST00000410692 191 ntBASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 RPL35AP24-201ENST00000413846 330 ntBASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 AC013429.2-201ENST00000418798 781 ntBASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 SLC35E1P1-201ENST00000419313 864 ntBASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 AL592293.2-201ENST00000422292 996 ntBASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 AL139148.1-201ENST00000427122 680 ntBASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 ELOCP14-201ENST00000428070 331 ntBASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 ELOCP7-201ENST00000439968 331 ntBASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 MTND1P12-201ENST00000455231 147 ntBASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 AC004129.2-201ENST00000457229 287 ntBASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 AC005532.2-201ENST00000467154 373 ntBASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 AC022034.3-201ENST00000471393 478 ntBASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 AC093270.2-201ENST00000486157 792 ntBASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 AC023194.1-201ENST00000493084 308 ntBASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 AC019235.1-201ENST00000503847 207 ntBASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 AC105384.2-201ENST00000508433 640 ntBASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC6.16□□□□□ -1.42
NPAS4Q8IUM7 AC100784.1-201ENST00000522790 310 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms