Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.2□□□□□ -1.9
LRRC28Q86X40 TRAV15-201ENST00000556680 249 ntBASIC3.2□□□□□ -1.9
LRRC28Q86X40 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.2□□□□□ -1.9
LRRC28Q86X40 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.2□□□□□ -1.9
LRRC28Q86X40 AP005901.4-201ENST00000577336 569 ntBASIC3.2□□□□□ -1.9
LRRC28Q86X40 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.2□□□□□ -1.9
LRRC28Q86X40 FAM106CP-201ENST00000582212 507 ntBASIC3.2□□□□□ -1.9
LRRC28Q86X40 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC3.2□□□□□ -1.9
LRRC28Q86X40 SNORA62.6-201ENST00000606322 83 ntBASIC3.2□□□□□ -1.9
LRRC28Q86X40 AC079684.1-201ENST00000621405 437 ntBASIC3.2□□□□□ -1.9
LRRC28Q86X40 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.2□□□□□ -1.9
LRRC28Q86X40 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LRRC28Q86X40 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.2□□□□□ -1.9
LRRC28Q86X40 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.2□□□□□ -1.9
LRRC28Q86X40 MFSD8-236ENST00000641509 4050 ntBASIC3.19□□□□□ -1.9
LRRC28Q86X40 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
LRRC28Q86X40 AC091152.2-201ENST00000591628 2569 ntBASIC3.19□□□□□ -1.9
LRRC28Q86X40 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LRRC28Q86X40 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LRRC28Q86X40 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.19□□□□□ -1.9
LRRC28Q86X40 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LRRC28Q86X40 SAGE2P-201ENST00000420011 2126 ntBASIC3.19□□□□□ -1.9
LRRC28Q86X40 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LRRC28Q86X40 PTMAP2-201ENST00000397627 327 ntBASIC3.19□□□□□ -1.9
LRRC28Q86X40 RPL31P52-201ENST00000407532 367 ntBASIC3.19□□□□□ -1.9
LRRC28Q86X40 RNU2-37P-201ENST00000410695 177 ntBASIC3.19□□□□□ -1.9
LRRC28Q86X40 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
LRRC28Q86X40 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.19□□□□□ -1.9
LRRC28Q86X40 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.19□□□□□ -1.9
LRRC28Q86X40 AL139247.1-201ENST00000422768 325 ntBASIC3.19□□□□□ -1.9
LRRC28Q86X40 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LRRC28Q86X40 AC244033.1-201ENST00000426826 870 ntBASIC3.19□□□□□ -1.9
LRRC28Q86X40 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.19□□□□□ -1.9
LRRC28Q86X40 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.19□□□□□ -1.9
LRRC28Q86X40 AL035246.1-201ENST00000433554 1255 ntBASIC3.19□□□□□ -1.9
LRRC28Q86X40 UBE2V2P1-201ENST00000434717 398 ntBASIC3.19□□□□□ -1.9
LRRC28Q86X40 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.19□□□□□ -1.9
LRRC28Q86X40 Z95327.1-201ENST00000446082 482 ntBASIC3.19□□□□□ -1.9
LRRC28Q86X40 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.19□□□□□ -1.9
LRRC28Q86X40 RNU6-1218P-201ENST00000458990 108 ntBASIC3.19□□□□□ -1.9
LRRC28Q86X40 SNORA84-201ENST00000459229 133 ntBASIC3.19□□□□□ -1.9
LRRC28Q86X40 RPL7P15-201ENST00000461190 712 ntBASIC3.19□□□□□ -1.9
LRRC28Q86X40 HAUS1P1-201ENST00000505275 832 ntBASIC3.19□□□□□ -1.9
LRRC28Q86X40 FABP5P12-201ENST00000515543 389 ntBASIC3.19□□□□□ -1.9
LRRC28Q86X40 AC022695.1-201ENST00000522089 237 ntBASIC3.19□□□□□ -1.9
LRRC28Q86X40 AP006245.1-201ENST00000522549 120 ntBASIC3.19□□□□□ -1.9
LRRC28Q86X40 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LRRC28Q86X40 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.19□□□□□ -1.9
LRRC28Q86X40 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.19□□□□□ -1.9
LRRC28Q86X40 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.19□□□□□ -1.9
LRRC28Q86X40 AC008011.1-201ENST00000545989 227 ntBASIC3.19□□□□□ -1.9
LRRC28Q86X40 AC004024.1-201ENST00000549244 247 ntBASIC3.19□□□□□ -1.9
LRRC28Q86X40 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.19□□□□□ -1.9
LRRC28Q86X40 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.19□□□□□ -1.9
LRRC28Q86X40 AC087499.8-201ENST00000578406 226 ntBASIC3.19□□□□□ -1.9
LRRC28Q86X40 MIR1254-2-201ENST00000579553 63 ntBASIC3.19□□□□□ -1.9
LRRC28Q86X40 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.19□□□□□ -1.9
LRRC28Q86X40 MIR5187-201ENST00000583479 76 ntBASIC3.19□□□□□ -1.9
LRRC28Q86X40 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.19□□□□□ -1.9
LRRC28Q86X40 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.19□□□□□ -1.9
LRRC28Q86X40 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LRRC28Q86X40 AC010680.4-201ENST00000605334 543 ntBASIC3.19□□□□□ -1.9
LRRC28Q86X40 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LRRC28Q86X40 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.19□□□□□ -1.9
LRRC28Q86X40 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LRRC28Q86X40 AC022149.2-201ENST00000621061 203 ntBASIC3.19□□□□□ -1.9
LRRC28Q86X40 AC018816.2-201ENST00000621460 353 ntBASIC3.19□□□□□ -1.9
LRRC28Q86X40 AC110801.1-201ENST00000623590 212 ntBASIC3.19□□□□□ -1.9
LRRC28Q86X40 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LRRC28Q86X40 AC024560.2-201ENST00000507981 1497 ntBASIC3.19□□□□□ -1.9
LRRC28Q86X40 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
LRRC28Q86X40 AC068647.1-201ENST00000489539 2265 ntBASIC3.19□□□□□ -1.9
LRRC28Q86X40 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.19□□□□□ -1.9
LRRC28Q86X40 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LRRC28Q86X40 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
LRRC28Q86X40 AC017002.4-201ENST00000604721 1525 ntBASIC3.19□□□□□ -1.9
LRRC28Q86X40 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LRRC28Q86X40 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LRRC28Q86X40 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
LRRC28Q86X40 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
LRRC28Q86X40 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LRRC28Q86X40 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
LRRC28Q86X40 RNU1-85P-201ENST00000364127 164 ntBASIC3.18□□□□□ -1.9
LRRC28Q86X40 SNORA73.2-201ENST00000364946 201 ntBASIC3.18□□□□□ -1.9
LRRC28Q86X40 SNORA62.3-201ENST00000365110 153 ntBASIC3.18□□□□□ -1.9
LRRC28Q86X40 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
LRRC28Q86X40 RNA5SP293-201ENST00000410527 113 ntBASIC3.18□□□□□ -1.9
LRRC28Q86X40 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.18□□□□□ -1.9
LRRC28Q86X40 GLRXP1-201ENST00000423261 334 ntBASIC3.18□□□□□ -1.9
LRRC28Q86X40 AC018644.1-201ENST00000429934 551 ntBASIC3.18□□□□□ -1.9
LRRC28Q86X40 AL445584.1-201ENST00000431451 330 ntBASIC3.18□□□□□ -1.9
LRRC28Q86X40 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.18□□□□□ -1.9
LRRC28Q86X40 SETD6P1-201ENST00000444575 317 ntBASIC3.18□□□□□ -1.9
LRRC28Q86X40 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.18□□□□□ -1.9
LRRC28Q86X40 RPS27P29-201ENST00000463110 252 ntBASIC3.18□□□□□ -1.9
LRRC28Q86X40 AL133162.1-201ENST00000463228 453 ntBASIC3.18□□□□□ -1.9
LRRC28Q86X40 TRBV8-1-201ENST00000481590 279 ntBASIC3.18□□□□□ -1.9
LRRC28Q86X40 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
LRRC28Q86X40 HMGB1P23-201ENST00000518743 568 ntBASIC3.18□□□□□ -1.9
LRRC28Q86X40 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms