Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 AL139022.2-201ENST00000606934 443 ntBASIC4.45□□□□□ -1.7
PRPF39Q86UA1 AC018754.1-201ENST00000607486 925 ntBASIC4.45□□□□□ -1.7
PRPF39Q86UA1 uc_338.13-201ENST00000618243 179 ntBASIC4.45□□□□□ -1.7
PRPF39Q86UA1 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.45□□□□□ -1.7
PRPF39Q86UA1 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PRPF39Q86UA1 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.45□□□□□ -1.7
PRPF39Q86UA1 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PRPF39Q86UA1 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PRPF39Q86UA1 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PRPF39Q86UA1 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PRPF39Q86UA1 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
PRPF39Q86UA1 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
PRPF39Q86UA1 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.44□□□□□ -1.7
PRPF39Q86UA1 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
PRPF39Q86UA1 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
PRPF39Q86UA1 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
PRPF39Q86UA1 MTND4P26-201ENST00000415971 1359 ntBASIC4.44□□□□□ -1.7
PRPF39Q86UA1 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PRPF39Q86UA1 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
PRPF39Q86UA1 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PRPF39Q86UA1 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PRPF39Q86UA1 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
PRPF39Q86UA1 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PRPF39Q86UA1 RNU6-441P-201ENST00000384545 106 ntBASIC4.44□□□□□ -1.7
PRPF39Q86UA1 AC097374.1-203ENST00000400783 485 ntBASIC4.44□□□□□ -1.7
PRPF39Q86UA1 RNA5SP104-201ENST00000410989 118 ntBASIC4.44□□□□□ -1.7
PRPF39Q86UA1 RNU6-575P-201ENST00000411326 105 ntBASIC4.44□□□□□ -1.7
PRPF39Q86UA1 RPL23AP26-201ENST00000412728 464 ntBASIC4.44□□□□□ -1.7
PRPF39Q86UA1 TCEA1P2-201ENST00000420496 906 ntBASIC4.44□□□□□ -1.7
PRPF39Q86UA1 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.44□□□□□ -1.7
PRPF39Q86UA1 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.44□□□□□ -1.7
PRPF39Q86UA1 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.44□□□□□ -1.7
PRPF39Q86UA1 NUTF2P7-201ENST00000453086 375 ntBASIC4.44□□□□□ -1.7
PRPF39Q86UA1 UQCRHP4-201ENST00000471686 272 ntBASIC4.44□□□□□ -1.7
PRPF39Q86UA1 GAPDHP39-201ENST00000481866 979 ntBASIC4.44□□□□□ -1.7
PRPF39Q86UA1 AC005726.1-201ENST00000494679 427 ntBASIC4.44□□□□□ -1.7
PRPF39Q86UA1 RN7SKP21-201ENST00000516503 220 ntBASIC4.44□□□□□ -1.7
PRPF39Q86UA1 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.44□□□□□ -1.7
PRPF39Q86UA1 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.44□□□□□ -1.7
PRPF39Q86UA1 AC118942.1-201ENST00000529674 1035 ntBASIC4.44□□□□□ -1.7
PRPF39Q86UA1 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PRPF39Q86UA1 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.44□□□□□ -1.7
PRPF39Q86UA1 AC113403.1-201ENST00000604910 193 ntBASIC4.44□□□□□ -1.7
PRPF39Q86UA1 AP005137.2-201ENST00000609238 400 ntBASIC4.44□□□□□ -1.7
PRPF39Q86UA1 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.44□□□□□ -1.7
PRPF39Q86UA1 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.44□□□□□ -1.7
PRPF39Q86UA1 AC121761.2-201ENST00000617300 689 ntBASIC4.44□□□□□ -1.7
PRPF39Q86UA1 AC006065.5-201ENST00000623427 349 ntBASIC4.44□□□□□ -1.7
PRPF39Q86UA1 AC090506.2-201ENST00000624521 419 ntBASIC4.44□□□□□ -1.7
PRPF39Q86UA1 ZNF663P-202ENST00000641770 1131 ntBASIC4.44□□□□□ -1.7
PRPF39Q86UA1 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.44□□□□□ -1.7
PRPF39Q86UA1 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
PRPF39Q86UA1 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PRPF39Q86UA1 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.44□□□□□ -1.7
PRPF39Q86UA1 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PRPF39Q86UA1 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PRPF39Q86UA1 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.43□□□□□ -1.7
PRPF39Q86UA1 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PRPF39Q86UA1 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PRPF39Q86UA1 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.43□□□□□ -1.7
PRPF39Q86UA1 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.43□□□□□ -1.7
PRPF39Q86UA1 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.43□□□□□ -1.7
PRPF39Q86UA1 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PRPF39Q86UA1 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.43□□□□□ -1.7
PRPF39Q86UA1 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
PRPF39Q86UA1 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.43□□□□□ -1.7
PRPF39Q86UA1 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
PRPF39Q86UA1 OR10J6P-201ENST00000289731 930 ntBASIC4.43□□□□□ -1.7
PRPF39Q86UA1 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
PRPF39Q86UA1 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PRPF39Q86UA1 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
PRPF39Q86UA1 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
PRPF39Q86UA1 MIR331-201ENST00000362302 94 ntBASIC4.43□□□□□ -1.7
PRPF39Q86UA1 RNU6-115P-201ENST00000364310 107 ntBASIC4.43□□□□□ -1.7
PRPF39Q86UA1 RNA5SP366-201ENST00000365454 123 ntBASIC4.43□□□□□ -1.7
PRPF39Q86UA1 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
PRPF39Q86UA1 RPS26P8-201ENST00000393490 348 ntBASIC4.43□□□□□ -1.7
PRPF39Q86UA1 AL121978.1-201ENST00000402778 359 ntBASIC4.43□□□□□ -1.7
PRPF39Q86UA1 MIR1250-201ENST00000408098 113 ntBASIC4.43□□□□□ -1.7
PRPF39Q86UA1 MIR1193-201ENST00000408109 78 ntBASIC4.43□□□□□ -1.7
PRPF39Q86UA1 SNORA11F-201ENST00000408237 128 ntBASIC4.43□□□□□ -1.7
PRPF39Q86UA1 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.43□□□□□ -1.7
PRPF39Q86UA1 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.43□□□□□ -1.7
PRPF39Q86UA1 RPS3AP9-201ENST00000417027 792 ntBASIC4.43□□□□□ -1.7
PRPF39Q86UA1 RPL17P36-201ENST00000420302 549 ntBASIC4.43□□□□□ -1.7
PRPF39Q86UA1 USP9YP21-201ENST00000420603 432 ntBASIC4.43□□□□□ -1.7
PRPF39Q86UA1 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.43□□□□□ -1.7
PRPF39Q86UA1 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC4.43□□□□□ -1.7
PRPF39Q86UA1 RPS27AP12-201ENST00000429552 465 ntBASIC4.43□□□□□ -1.7
PRPF39Q86UA1 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.43□□□□□ -1.7
PRPF39Q86UA1 RPS3AP54-201ENST00000435535 734 ntBASIC4.43□□□□□ -1.7
PRPF39Q86UA1 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.43□□□□□ -1.7
PRPF39Q86UA1 RPL23AP33-201ENST00000442301 452 ntBASIC4.43□□□□□ -1.7
PRPF39Q86UA1 ABCF2P2-201ENST00000450549 296 ntBASIC4.43□□□□□ -1.7
PRPF39Q86UA1 AL645939.1-201ENST00000453429 797 ntBASIC4.43□□□□□ -1.7
PRPF39Q86UA1 AC104982.1-201ENST00000478775 574 ntBASIC4.43□□□□□ -1.7
PRPF39Q86UA1 AC091167.1-201ENST00000492017 396 ntBASIC4.43□□□□□ -1.7
PRPF39Q86UA1 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.43□□□□□ -1.7
PRPF39Q86UA1 CAB39P1-201ENST00000502277 460 ntBASIC4.43□□□□□ -1.7
PRPF39Q86UA1 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms