Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 AC100770.1-201ENST00000532310 322 ntBASIC4.56□□□□□ -1.68
USP41Q3LFD5 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.56□□□□□ -1.68
USP41Q3LFD5 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.56□□□□□ -1.68
USP41Q3LFD5 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.56□□□□□ -1.68
USP41Q3LFD5 MIR5708-201ENST00000579723 85 ntBASIC4.56□□□□□ -1.68
USP41Q3LFD5 PCNAP1-202ENST00000595299 752 ntBASIC4.56□□□□□ -1.68
USP41Q3LFD5 RPL7P50-201ENST00000600588 727 ntBASIC4.56□□□□□ -1.68
USP41Q3LFD5 AC234772.3-201ENST00000602277 528 ntBASIC4.56□□□□□ -1.68
USP41Q3LFD5 AL139395.1-201ENST00000603662 160 ntBASIC4.56□□□□□ -1.68
USP41Q3LFD5 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.56□□□□□ -1.68
USP41Q3LFD5 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.56□□□□□ -1.68
USP41Q3LFD5 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
USP41Q3LFD5 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
USP41Q3LFD5 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
USP41Q3LFD5 IQCB2P-201ENST00000401788 1633 ntBASIC4.56□□□□□ -1.68
USP41Q3LFD5 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.56□□□□□ -1.68
USP41Q3LFD5 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
USP41Q3LFD5 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.56□□□□□ -1.68
USP41Q3LFD5 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.55□□□□□ -1.68
USP41Q3LFD5 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
USP41Q3LFD5 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
USP41Q3LFD5 AC092162.3-201ENST00000624511 1624 ntBASIC4.55□□□□□ -1.68
USP41Q3LFD5 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
USP41Q3LFD5 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.55□□□□□ -1.68
USP41Q3LFD5 RNA5SP283-201ENST00000365604 119 ntBASIC4.55□□□□□ -1.68
USP41Q3LFD5 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
USP41Q3LFD5 AL136310.1-201ENST00000404926 654 ntBASIC4.55□□□□□ -1.68
USP41Q3LFD5 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.55□□□□□ -1.68
USP41Q3LFD5 AC073136.2-201ENST00000417282 849 ntBASIC4.55□□□□□ -1.68
USP41Q3LFD5 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.55□□□□□ -1.68
USP41Q3LFD5 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.55□□□□□ -1.68
USP41Q3LFD5 MOB1AP1-201ENST00000430903 535 ntBASIC4.55□□□□□ -1.68
USP41Q3LFD5 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC4.55□□□□□ -1.68
USP41Q3LFD5 AL591719.1-201ENST00000444669 744 ntBASIC4.55□□□□□ -1.68
USP41Q3LFD5 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.55□□□□□ -1.68
USP41Q3LFD5 RPL5P32-201ENST00000454085 879 ntBASIC4.55□□□□□ -1.68
USP41Q3LFD5 AC005410.1-202ENST00000460347 485 ntBASIC4.55□□□□□ -1.68
USP41Q3LFD5 AC015724.1-201ENST00000478577 156 ntBASIC4.55□□□□□ -1.68
USP41Q3LFD5 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
USP41Q3LFD5 AC108022.1-201ENST00000493466 478 ntBASIC4.55□□□□□ -1.68
USP41Q3LFD5 AC118282.2-201ENST00000508739 374 ntBASIC4.55□□□□□ -1.68
USP41Q3LFD5 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.55□□□□□ -1.68
USP41Q3LFD5 RNA5SP154-201ENST00000516193 111 ntBASIC4.55□□□□□ -1.68
USP41Q3LFD5 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.55□□□□□ -1.68
USP41Q3LFD5 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4.55□□□□□ -1.68
USP41Q3LFD5 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.55□□□□□ -1.68
USP41Q3LFD5 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.55□□□□□ -1.68
USP41Q3LFD5 AC124068.1-201ENST00000563131 678 ntBASIC4.55□□□□□ -1.68
USP41Q3LFD5 AL121834.1-201ENST00000572284 509 ntBASIC4.55□□□□□ -1.68
USP41Q3LFD5 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.55□□□□□ -1.68
USP41Q3LFD5 AC010201.1-201ENST00000605051 540 ntBASIC4.55□□□□□ -1.68
USP41Q3LFD5 RNU4-89P-201ENST00000607443 133 ntBASIC4.55□□□□□ -1.68
USP41Q3LFD5 AC099676.1-201ENST00000608886 657 ntBASIC4.55□□□□□ -1.68
USP41Q3LFD5 AL138478.1-201ENST00000612252 832 ntBASIC4.55□□□□□ -1.68
USP41Q3LFD5 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.55□□□□□ -1.68
USP41Q3LFD5 AC007546.1-201ENST00000619452 559 ntBASIC4.55□□□□□ -1.68
USP41Q3LFD5 AC010608.2-201ENST00000624830 470 ntBASIC4.55□□□□□ -1.68
USP41Q3LFD5 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.55□□□□□ -1.68
USP41Q3LFD5 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
USP41Q3LFD5 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.55□□□□□ -1.68
USP41Q3LFD5 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
USP41Q3LFD5 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.55□□□□□ -1.68
USP41Q3LFD5 AC000367.1-201ENST00000452711 1766 ntBASIC4.55□□□□□ -1.68
USP41Q3LFD5 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
USP41Q3LFD5 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
USP41Q3LFD5 AC025263.3-201ENST00000622965 1396 ntBASIC4.54□□□□□ -1.68
USP41Q3LFD5 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.54□□□□□ -1.68
USP41Q3LFD5 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
USP41Q3LFD5 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
USP41Q3LFD5 OR52B1P-201ENST00000316506 909 ntBASIC4.54□□□□□ -1.68
USP41Q3LFD5 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.54□□□□□ -1.68
USP41Q3LFD5 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.54□□□□□ -1.68
USP41Q3LFD5 SNORA51.12-201ENST00000384448 134 ntBASIC4.54□□□□□ -1.68
USP41Q3LFD5 RNU6-636P-201ENST00000384598 107 ntBASIC4.54□□□□□ -1.68
USP41Q3LFD5 RPL32P23-201ENST00000397237 405 ntBASIC4.54□□□□□ -1.68
USP41Q3LFD5 MTCO2P31-201ENST00000402702 684 ntBASIC4.54□□□□□ -1.68
USP41Q3LFD5 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
USP41Q3LFD5 RNU6-575P-201ENST00000411326 105 ntBASIC4.54□□□□□ -1.68
USP41Q3LFD5 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.54□□□□□ -1.68
USP41Q3LFD5 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.54□□□□□ -1.68
USP41Q3LFD5 HIGD1AP15-201ENST00000416198 280 ntBASIC4.54□□□□□ -1.68
USP41Q3LFD5 OR4K6P-201ENST00000416478 897 ntBASIC4.54□□□□□ -1.68
USP41Q3LFD5 RPL36AP36-201ENST00000418616 301 ntBASIC4.54□□□□□ -1.68
USP41Q3LFD5 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.54□□□□□ -1.68
USP41Q3LFD5 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.54□□□□□ -1.68
USP41Q3LFD5 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.54□□□□□ -1.68
USP41Q3LFD5 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.54□□□□□ -1.68
USP41Q3LFD5 AC069285.2-201ENST00000440210 275 ntBASIC4.54□□□□□ -1.68
USP41Q3LFD5 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.54□□□□□ -1.68
USP41Q3LFD5 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.54□□□□□ -1.68
USP41Q3LFD5 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.54□□□□□ -1.68
USP41Q3LFD5 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
USP41Q3LFD5 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
USP41Q3LFD5 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
USP41Q3LFD5 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.54□□□□□ -1.68
USP41Q3LFD5 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
USP41Q3LFD5 RN7SKP287-201ENST00000516546 266 ntBASIC4.54□□□□□ -1.68
USP41Q3LFD5 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.54□□□□□ -1.68
USP41Q3LFD5 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.54□□□□□ -1.68
USP41Q3LFD5 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms