Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RFX4Q33E94 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.49□□□□□ -1.85
RFX4Q33E94 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RFX4Q33E94 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RFX4Q33E94 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
RFX4Q33E94 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.48□□□□□ -1.85
RFX4Q33E94 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
RFX4Q33E94 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RFX4Q33E94 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
RFX4Q33E94 RNA5SP130-201ENST00000364431 114 ntBASIC3.48□□□□□ -1.85
RFX4Q33E94 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RFX4Q33E94 RNU6-328P-201ENST00000390887 106 ntBASIC3.48□□□□□ -1.85
RFX4Q33E94 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RFX4Q33E94 AC136624.1-201ENST00000400791 413 ntBASIC3.48□□□□□ -1.85
RFX4Q33E94 AL136116.1-201ENST00000403591 381 ntBASIC3.48□□□□□ -1.85
RFX4Q33E94 PRELID3BP11-201ENST00000414230 479 ntBASIC3.48□□□□□ -1.85
RFX4Q33E94 LINC01347-201ENST00000417964 355 ntBASIC3.48□□□□□ -1.85
RFX4Q33E94 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.48□□□□□ -1.85
RFX4Q33E94 AL691449.1-201ENST00000426570 421 ntBASIC3.48□□□□□ -1.85
RFX4Q33E94 AL390879.2-203ENST00000426943 1121 ntBASIC3.48□□□□□ -1.85
RFX4Q33E94 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.48□□□□□ -1.85
RFX4Q33E94 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.48□□□□□ -1.85
RFX4Q33E94 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.48□□□□□ -1.85
RFX4Q33E94 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.48□□□□□ -1.85
RFX4Q33E94 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.48□□□□□ -1.85
RFX4Q33E94 MTCYBP21-201ENST00000443300 1113 ntBASIC3.48□□□□□ -1.85
RFX4Q33E94 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.48□□□□□ -1.85
RFX4Q33E94 AL353718.1-201ENST00000451028 517 ntBASIC3.48□□□□□ -1.85
RFX4Q33E94 TVP23BP2-201ENST00000455082 615 ntBASIC3.48□□□□□ -1.85
RFX4Q33E94 MTND2P30-201ENST00000456663 382 ntBASIC3.48□□□□□ -1.85
RFX4Q33E94 RPL9P32-201ENST00000464118 620 ntBASIC3.48□□□□□ -1.85
RFX4Q33E94 AC087312.1-201ENST00000471411 480 ntBASIC3.48□□□□□ -1.85
RFX4Q33E94 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.48□□□□□ -1.85
RFX4Q33E94 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.48□□□□□ -1.85
RFX4Q33E94 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.48□□□□□ -1.85
RFX4Q33E94 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.48□□□□□ -1.85
RFX4Q33E94 RNU6-1102P-201ENST00000516149 96 ntBASIC3.48□□□□□ -1.85
RFX4Q33E94 RNA5SP164-201ENST00000516533 110 ntBASIC3.48□□□□□ -1.85
RFX4Q33E94 IGKV2-23-201ENST00000518729 323 ntBASIC3.48□□□□□ -1.85
RFX4Q33E94 NDUFA5P2-201ENST00000519723 344 ntBASIC3.48□□□□□ -1.85
RFX4Q33E94 MRPL49P2-201ENST00000521066 465 ntBASIC3.48□□□□□ -1.85
RFX4Q33E94 OR8K2P-201ENST00000524645 927 ntBASIC3.48□□□□□ -1.85
RFX4Q33E94 AP001636.2-201ENST00000525517 696 ntBASIC3.48□□□□□ -1.85
RFX4Q33E94 AP000926.4-201ENST00000527351 454 ntBASIC3.48□□□□□ -1.85
RFX4Q33E94 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.48□□□□□ -1.85
RFX4Q33E94 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.48□□□□□ -1.85
RFX4Q33E94 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.48□□□□□ -1.85
RFX4Q33E94 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.48□□□□□ -1.85
RFX4Q33E94 AC106785.3-201ENST00000564064 847 ntBASIC3.48□□□□□ -1.85
RFX4Q33E94 AC006270.2-201ENST00000578523 652 ntBASIC3.48□□□□□ -1.85
RFX4Q33E94 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
RFX4Q33E94 MIR3939-201ENST00000582614 106 ntBASIC3.48□□□□□ -1.85
RFX4Q33E94 AC022146.1-201ENST00000595307 847 ntBASIC3.48□□□□□ -1.85
RFX4Q33E94 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.48□□□□□ -1.85
RFX4Q33E94 AP003117.1-201ENST00000602771 554 ntBASIC3.48□□□□□ -1.85
RFX4Q33E94 AL163642.2-201ENST00000604722 1019 ntBASIC3.48□□□□□ -1.85
RFX4Q33E94 KATNBL1P5-201ENST00000605015 517 ntBASIC3.48□□□□□ -1.85
RFX4Q33E94 AC012531.5-201ENST00000611375 151 ntBASIC3.48□□□□□ -1.85
RFX4Q33E94 AL162574.2-201ENST00000614618 657 ntBASIC3.48□□□□□ -1.85
RFX4Q33E94 MIR7973-1-201ENST00000614683 76 ntBASIC3.48□□□□□ -1.85
RFX4Q33E94 MLECP1-201ENST00000615893 709 ntBASIC3.48□□□□□ -1.85
RFX4Q33E94 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.48□□□□□ -1.85
RFX4Q33E94 AC015726.3-201ENST00000624501 418 ntBASIC3.48□□□□□ -1.85
RFX4Q33E94 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.48□□□□□ -1.85
RFX4Q33E94 CDRT1-208ENST00000630868 794 ntBASIC3.48□□□□□ -1.85
RFX4Q33E94 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
RFX4Q33E94 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RFX4Q33E94 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
RFX4Q33E94 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.47□□□□□ -1.85
RFX4Q33E94 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.47□□□□□ -1.85
RFX4Q33E94 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RFX4Q33E94 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
RFX4Q33E94 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RFX4Q33E94 GTF2H2B-203ENST00000508065 1432 ntBASIC3.47□□□□□ -1.85
RFX4Q33E94 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RFX4Q33E94 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
RFX4Q33E94 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
RFX4Q33E94 RNU6-55P-201ENST00000411092 107 ntBASIC3.47□□□□□ -1.85
RFX4Q33E94 RNU6-954P-201ENST00000411355 107 ntBASIC3.47□□□□□ -1.85
RFX4Q33E94 AC105402.1-201ENST00000413336 545 ntBASIC3.47□□□□□ -1.85
RFX4Q33E94 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.47□□□□□ -1.85
RFX4Q33E94 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.47□□□□□ -1.85
RFX4Q33E94 LINC01881-201ENST00000416103 412 ntBASIC3.47□□□□□ -1.85
RFX4Q33E94 MTATP6P11-201ENST00000428071 670 ntBASIC3.47□□□□□ -1.85
RFX4Q33E94 AL158071.1-201ENST00000430315 461 ntBASIC3.47□□□□□ -1.85
RFX4Q33E94 AL035458.1-201ENST00000433096 585 ntBASIC3.47□□□□□ -1.85
RFX4Q33E94 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.47□□□□□ -1.85
RFX4Q33E94 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.47□□□□□ -1.85
RFX4Q33E94 RPL23AP23-201ENST00000452590 471 ntBASIC3.47□□□□□ -1.85
RFX4Q33E94 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RFX4Q33E94 CEACAMP4-201ENST00000457676 421 ntBASIC3.47□□□□□ -1.85
RFX4Q33E94 RPS23P7-201ENST00000466210 444 ntBASIC3.47□□□□□ -1.85
RFX4Q33E94 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.47□□□□□ -1.85
RFX4Q33E94 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.47□□□□□ -1.85
RFX4Q33E94 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.47□□□□□ -1.85
RFX4Q33E94 SNORA31.9-201ENST00000516429 84 ntBASIC3.47□□□□□ -1.85
RFX4Q33E94 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.47□□□□□ -1.85
RFX4Q33E94 AL121766.1-201ENST00000547436 487 ntBASIC3.47□□□□□ -1.85
RFX4Q33E94 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.47□□□□□ -1.85
RFX4Q33E94 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms