Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 VN1R51P-201ENST00000411675 945 ntBASIC3.91□□□□□ -1.78
SIX1Q15475 VTA1P1-201ENST00000414044 866 ntBASIC3.91□□□□□ -1.78
SIX1Q15475 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC3.91□□□□□ -1.78
SIX1Q15475 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC3.91□□□□□ -1.78
SIX1Q15475 AC114814.2-201ENST00000419195 485 ntBASIC3.91□□□□□ -1.78
SIX1Q15475 TCEA1P2-201ENST00000420496 906 ntBASIC3.91□□□□□ -1.78
SIX1Q15475 PTP4A1P7-201ENST00000423476 514 ntBASIC3.91□□□□□ -1.78
SIX1Q15475 HIGD1AP12-201ENST00000427832 281 ntBASIC3.91□□□□□ -1.78
SIX1Q15475 AC093422.3-201ENST00000428506 305 ntBASIC3.91□□□□□ -1.78
SIX1Q15475 FABP5P3-201ENST00000437960 408 ntBASIC3.91□□□□□ -1.78
SIX1Q15475 AL353093.1-201ENST00000441292 436 ntBASIC3.91□□□□□ -1.78
SIX1Q15475 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.91□□□□□ -1.78
SIX1Q15475 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.91□□□□□ -1.78
SIX1Q15475 RPS29P31-201ENST00000446147 164 ntBASIC3.91□□□□□ -1.78
SIX1Q15475 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.91□□□□□ -1.78
SIX1Q15475 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.91□□□□□ -1.78
SIX1Q15475 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SIX1Q15475 RNU7-27P-201ENST00000459281 62 ntBASIC3.91□□□□□ -1.78
SIX1Q15475 RPL7P48-201ENST00000461513 746 ntBASIC3.91□□□□□ -1.78
SIX1Q15475 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.91□□□□□ -1.78
SIX1Q15475 AC104982.1-201ENST00000478775 574 ntBASIC3.91□□□□□ -1.78
SIX1Q15475 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.91□□□□□ -1.78
SIX1Q15475 AC146944.2-203ENST00000502493 354 ntBASIC3.91□□□□□ -1.78
SIX1Q15475 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.91□□□□□ -1.78
SIX1Q15475 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SIX1Q15475 GTF2H2B-203ENST00000508065 1432 ntBASIC3.91□□□□□ -1.78
SIX1Q15475 AC139495.1-202ENST00000513164 354 ntBASIC3.91□□□□□ -1.78
SIX1Q15475 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC3.91□□□□□ -1.78
SIX1Q15475 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.91□□□□□ -1.78
SIX1Q15475 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.91□□□□□ -1.78
SIX1Q15475 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.91□□□□□ -1.78
SIX1Q15475 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.91□□□□□ -1.78
SIX1Q15475 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.91□□□□□ -1.78
SIX1Q15475 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.91□□□□□ -1.78
SIX1Q15475 BNIP3P5-201ENST00000562290 498 ntBASIC3.91□□□□□ -1.78
SIX1Q15475 CYP2C60P-201ENST00000566088 139 ntBASIC3.91□□□□□ -1.78
SIX1Q15475 AC010735.1-201ENST00000567305 1026 ntBASIC3.91□□□□□ -1.78
SIX1Q15475 AP000919.1-202ENST00000581139 1264 ntBASIC3.91□□□□□ -1.78
SIX1Q15475 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.91□□□□□ -1.78
SIX1Q15475 RN7SL622P-201ENST00000585292 275 ntBASIC3.91□□□□□ -1.78
SIX1Q15475 AC091057.3-201ENST00000602684 733 ntBASIC3.91□□□□□ -1.78
SIX1Q15475 AC096947.1-201ENST00000603233 470 ntBASIC3.91□□□□□ -1.78
SIX1Q15475 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.91□□□□□ -1.78
SIX1Q15475 RNU4-89P-201ENST00000607443 133 ntBASIC3.91□□□□□ -1.78
SIX1Q15475 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.91□□□□□ -1.78
SIX1Q15475 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC3.91□□□□□ -1.78
SIX1Q15475 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.91□□□□□ -1.78
SIX1Q15475 AC013437.2-201ENST00000639587 677 ntBASIC3.91□□□□□ -1.78
SIX1Q15475 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.91□□□□□ -1.78
SIX1Q15475 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SIX1Q15475 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.91□□□□□ -1.78
SIX1Q15475 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.91□□□□□ -1.78
SIX1Q15475 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.9□□□□□ -1.78
SIX1Q15475 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
SIX1Q15475 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
SIX1Q15475 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.9□□□□□ -1.78
SIX1Q15475 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
SIX1Q15475 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
SIX1Q15475 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
SIX1Q15475 RNA5SP479-201ENST00000364858 117 ntBASIC3.9□□□□□ -1.79
SIX1Q15475 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.9□□□□□ -1.79
SIX1Q15475 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
SIX1Q15475 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SIX1Q15475 RPL21P65-201ENST00000406094 466 ntBASIC3.9□□□□□ -1.79
SIX1Q15475 EIF4A1P3-201ENST00000411521 244 ntBASIC3.9□□□□□ -1.79
SIX1Q15475 RHEBP3-201ENST00000411920 351 ntBASIC3.9□□□□□ -1.79
SIX1Q15475 AC013404.1-201ENST00000413068 249 ntBASIC3.9□□□□□ -1.79
SIX1Q15475 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.9□□□□□ -1.79
SIX1Q15475 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.9□□□□□ -1.79
SIX1Q15475 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.9□□□□□ -1.79
SIX1Q15475 AL365396.1-201ENST00000430854 671 ntBASIC3.9□□□□□ -1.79
SIX1Q15475 ARF4P4-201ENST00000439608 520 ntBASIC3.9□□□□□ -1.79
SIX1Q15475 AC009263.1-201ENST00000441193 1239 ntBASIC3.9□□□□□ -1.79
SIX1Q15475 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.9□□□□□ -1.79
SIX1Q15475 RPL5P32-201ENST00000454085 879 ntBASIC3.9□□□□□ -1.79
SIX1Q15475 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.9□□□□□ -1.79
SIX1Q15475 RPL7P19-201ENST00000469948 618 ntBASIC3.9□□□□□ -1.79
SIX1Q15475 AC008427.1-201ENST00000503102 655 ntBASIC3.9□□□□□ -1.79
SIX1Q15475 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.9□□□□□ -1.79
SIX1Q15475 AC108471.1-201ENST00000513977 287 ntBASIC3.9□□□□□ -1.79
SIX1Q15475 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SIX1Q15475 MIR3160-1-201ENST00000577972 85 ntBASIC3.9□□□□□ -1.79
SIX1Q15475 MIR4738-201ENST00000579134 87 ntBASIC3.9□□□□□ -1.79
SIX1Q15475 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC3.9□□□□□ -1.79
SIX1Q15475 AC099785.1-201ENST00000605697 437 ntBASIC3.9□□□□□ -1.79
SIX1Q15475 AP002802.2-201ENST00000605877 235 ntBASIC3.9□□□□□ -1.79
SIX1Q15475 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
SIX1Q15475 FRG1HP-204ENST00000617940 757 ntBASIC3.9□□□□□ -1.79
SIX1Q15475 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.9□□□□□ -1.79
SIX1Q15475 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.9□□□□□ -1.79
SIX1Q15475 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
SIX1Q15475 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC3.9□□□□□ -1.79
SIX1Q15475 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.9□□□□□ -1.79
SIX1Q15475 AC009229.4-201ENST00000623854 1947 ntBASIC3.89□□□□□ -1.79
SIX1Q15475 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
SIX1Q15475 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
SIX1Q15475 AL121657.1-201ENST00000327215 531 ntBASIC3.89□□□□□ -1.79
SIX1Q15475 RNA5SP27-201ENST00000363839 119 ntBASIC3.89□□□□□ -1.79
SIX1Q15475 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.89□□□□□ -1.79
SIX1Q15475 TCEA1P4-201ENST00000415066 844 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms