Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 MTCO1P48-201ENST00000448024 1096 ntBASIC3.96□□□□□ -1.78
SCN1BQ07699 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SCN1BQ07699 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SCN1BQ07699 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC3.96□□□□□ -1.78
SCN1BQ07699 RPL5P32-201ENST00000454085 879 ntBASIC3.96□□□□□ -1.78
SCN1BQ07699 AURKAPS2-201ENST00000454983 333 ntBASIC3.96□□□□□ -1.78
SCN1BQ07699 AC090142.1-201ENST00000465776 462 ntBASIC3.96□□□□□ -1.78
SCN1BQ07699 AC069528.1-202ENST00000482888 637 ntBASIC3.96□□□□□ -1.78
SCN1BQ07699 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.96□□□□□ -1.78
SCN1BQ07699 AC079203.1-201ENST00000487972 404 ntBASIC3.96□□□□□ -1.78
SCN1BQ07699 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.96□□□□□ -1.78
SCN1BQ07699 AL592156.1-201ENST00000508758 304 ntBASIC3.96□□□□□ -1.78
SCN1BQ07699 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC3.96□□□□□ -1.78
SCN1BQ07699 AC023141.12-201ENST00000512399 199 ntBASIC3.96□□□□□ -1.78
SCN1BQ07699 ATG10-208ENST00000513634 618 ntTSL 2 BASIC3.96□□□□□ -1.78
SCN1BQ07699 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SCN1BQ07699 AP004242.1-201ENST00000533701 349 ntBASIC3.96□□□□□ -1.78
SCN1BQ07699 AP001880.2-201ENST00000538233 448 ntBASIC3.96□□□□□ -1.78
SCN1BQ07699 AC008033.2-201ENST00000542626 177 ntBASIC3.96□□□□□ -1.78
SCN1BQ07699 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC3.96□□□□□ -1.78
SCN1BQ07699 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.96□□□□□ -1.78
SCN1BQ07699 AL352979.3-201ENST00000553515 247 ntBASIC3.96□□□□□ -1.78
SCN1BQ07699 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.96□□□□□ -1.78
SCN1BQ07699 AL360157.1-201ENST00000565962 87 ntBASIC3.96□□□□□ -1.78
SCN1BQ07699 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
SCN1BQ07699 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC3.96□□□□□ -1.78
SCN1BQ07699 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC3.96□□□□□ -1.78
SCN1BQ07699 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.96□□□□□ -1.78
SCN1BQ07699 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC3.96□□□□□ -1.78
SCN1BQ07699 HMGB1P50-201ENST00000605814 607 ntBASIC3.96□□□□□ -1.78
SCN1BQ07699 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.96□□□□□ -1.78
SCN1BQ07699 AC024060.1-201ENST00000607052 494 ntBASIC3.96□□□□□ -1.78
SCN1BQ07699 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.96□□□□□ -1.78
SCN1BQ07699 AC073968.1-201ENST00000618594 637 ntBASIC3.96□□□□□ -1.78
SCN1BQ07699 AC009269.6-201ENST00000621778 588 ntBASIC3.96□□□□□ -1.78
SCN1BQ07699 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.96□□□□□ -1.78
SCN1BQ07699 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
SCN1BQ07699 AC027287.1-201ENST00000553115 1453 ntBASIC3.96□□□□□ -1.78
SCN1BQ07699 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.96□□□□□ -1.78
SCN1BQ07699 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
SCN1BQ07699 CIR1P2-201ENST00000514821 1342 ntBASIC3.95□□□□□ -1.78
SCN1BQ07699 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
SCN1BQ07699 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
SCN1BQ07699 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SCN1BQ07699 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SCN1BQ07699 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.95□□□□□ -1.78
SCN1BQ07699 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SCN1BQ07699 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SCN1BQ07699 RNA5SP189-201ENST00000364920 115 ntBASIC3.95□□□□□ -1.78
SCN1BQ07699 SNORD82-201ENST00000365530 70 ntBASIC3.95□□□□□ -1.78
SCN1BQ07699 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SCN1BQ07699 AL049697.2-201ENST00000403708 294 ntBASIC3.95□□□□□ -1.78
SCN1BQ07699 RPL23AP47-201ENST00000408017 460 ntBASIC3.95□□□□□ -1.78
SCN1BQ07699 RNU2-28P-201ENST00000410457 189 ntBASIC3.95□□□□□ -1.78
SCN1BQ07699 RN7SKP56-201ENST00000410513 331 ntBASIC3.95□□□□□ -1.78
SCN1BQ07699 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.95□□□□□ -1.78
SCN1BQ07699 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.95□□□□□ -1.78
SCN1BQ07699 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.95□□□□□ -1.78
SCN1BQ07699 AL354692.1-201ENST00000423044 315 ntBASIC3.95□□□□□ -1.78
SCN1BQ07699 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC3.95□□□□□ -1.78
SCN1BQ07699 VDAC1P6-201ENST00000430062 855 ntBASIC3.95□□□□□ -1.78
SCN1BQ07699 RPL7P28-201ENST00000437739 740 ntBASIC3.95□□□□□ -1.78
SCN1BQ07699 AC127537.2-201ENST00000439258 465 ntBASIC3.95□□□□□ -1.78
SCN1BQ07699 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC3.95□□□□□ -1.78
SCN1BQ07699 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.95□□□□□ -1.78
SCN1BQ07699 RPS5P7-201ENST00000456664 608 ntBASIC3.95□□□□□ -1.78
SCN1BQ07699 PABPC1P3-201ENST00000469174 459 ntBASIC3.95□□□□□ -1.78
SCN1BQ07699 AC092451.1-201ENST00000480211 153 ntBASIC3.95□□□□□ -1.78
SCN1BQ07699 AC013828.1-201ENST00000481845 158 ntBASIC3.95□□□□□ -1.78
SCN1BQ07699 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.95□□□□□ -1.78
SCN1BQ07699 AC096571.1-202ENST00000506634 735 ntBASIC3.95□□□□□ -1.78
SCN1BQ07699 AC110775.1-201ENST00000513721 462 ntBASIC3.95□□□□□ -1.78
SCN1BQ07699 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC3.95□□□□□ -1.78
SCN1BQ07699 AC091163.3-201ENST00000518269 1144 ntBASIC3.95□□□□□ -1.78
SCN1BQ07699 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.95□□□□□ -1.78
SCN1BQ07699 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.95□□□□□ -1.78
SCN1BQ07699 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.95□□□□□ -1.78
SCN1BQ07699 AP004371.1-201ENST00000525240 214 ntBASIC3.95□□□□□ -1.78
SCN1BQ07699 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC3.95□□□□□ -1.78
SCN1BQ07699 PHBP17-201ENST00000528576 541 ntBASIC3.95□□□□□ -1.78
SCN1BQ07699 AC021006.3-201ENST00000530771 192 ntBASIC3.95□□□□□ -1.78
SCN1BQ07699 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC3.95□□□□□ -1.78
SCN1BQ07699 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC3.95□□□□□ -1.78
SCN1BQ07699 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.95□□□□□ -1.78
SCN1BQ07699 RN7SL652P-201ENST00000577769 300 ntBASIC3.95□□□□□ -1.78
SCN1BQ07699 AC012603.1-201ENST00000606424 528 ntBASIC3.95□□□□□ -1.78
SCN1BQ07699 AC009237.15-201ENST00000610252 501 ntBASIC3.95□□□□□ -1.78
SCN1BQ07699 AC008083.4-201ENST00000615076 444 ntBASIC3.95□□□□□ -1.78
SCN1BQ07699 uc_338.32-201ENST00000615087 172 ntBASIC3.95□□□□□ -1.78
SCN1BQ07699 AC090510.2-201ENST00000617465 629 ntBASIC3.95□□□□□ -1.78
SCN1BQ07699 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
SCN1BQ07699 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.95□□□□□ -1.78
SCN1BQ07699 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
SCN1BQ07699 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SCN1BQ07699 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SCN1BQ07699 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.95□□□□□ -1.78
SCN1BQ07699 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SCN1BQ07699 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.94□□□□□ -1.78
SCN1BQ07699 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
SCN1BQ07699 MFSD4BP1-201ENST00000513330 1552 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms