Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC5.96□□□□□ -1.46
SOX4Q06945 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.96□□□□□ -1.46
SOX4Q06945 AC126177.5-201ENST00000549599 178 ntBASIC5.96□□□□□ -1.46
SOX4Q06945 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.96□□□□□ -1.46
SOX4Q06945 AL355836.1-201ENST00000555951 870 ntBASIC5.96□□□□□ -1.46
SOX4Q06945 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.96□□□□□ -1.46
SOX4Q06945 HMGN2P47-201ENST00000559378 272 ntBASIC5.96□□□□□ -1.46
SOX4Q06945 AC009117.1-201ENST00000563948 554 ntBASIC5.96□□□□□ -1.46
SOX4Q06945 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC5.96□□□□□ -1.46
SOX4Q06945 AC093249.1-201ENST00000567049 203 ntBASIC5.96□□□□□ -1.46
SOX4Q06945 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
SOX4Q06945 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
SOX4Q06945 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC5.96□□□□□ -1.46
SOX4Q06945 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC5.96□□□□□ -1.46
SOX4Q06945 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.96□□□□□ -1.46
SOX4Q06945 AC004853.1-201ENST00000604902 698 ntBASIC5.96□□□□□ -1.46
SOX4Q06945 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.96□□□□□ -1.46
SOX4Q06945 AC009248.2-201ENST00000619826 254 ntBASIC5.96□□□□□ -1.46
SOX4Q06945 AC090971.5-201ENST00000621102 293 ntBASIC5.96□□□□□ -1.46
SOX4Q06945 AC145207.9-201ENST00000623802 325 ntBASIC5.96□□□□□ -1.46
SOX4Q06945 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SOX4Q06945 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.96□□□□□ -1.46
SOX4Q06945 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SOX4Q06945 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
SOX4Q06945 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SOX4Q06945 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SOX4Q06945 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.96□□□□□ -1.46
SOX4Q06945 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
SOX4Q06945 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC5.96□□□□□ -1.46
SOX4Q06945 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.96□□□□□ -1.46
SOX4Q06945 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
SOX4Q06945 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.95□□□□□ -1.46
SOX4Q06945 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.95□□□□□ -1.46
SOX4Q06945 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
SOX4Q06945 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SOX4Q06945 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
SOX4Q06945 AC140479.2-201ENST00000421567 3130 ntBASIC5.95□□□□□ -1.46
SOX4Q06945 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SOX4Q06945 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC5.95□□□□□ -1.46
SOX4Q06945 AC104964.3-201ENST00000606115 2860 ntBASIC5.95□□□□□ -1.46
SOX4Q06945 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
SOX4Q06945 OR5J1P-201ENST00000313544 939 ntBASIC5.95□□□□□ -1.46
SOX4Q06945 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.95□□□□□ -1.46
SOX4Q06945 AC005294.1-201ENST00000355509 281 ntBASIC5.95□□□□□ -1.46
SOX4Q06945 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SOX4Q06945 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SOX4Q06945 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SOX4Q06945 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
SOX4Q06945 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SOX4Q06945 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SOX4Q06945 Y_RNA.384-201ENST00000383909 102 ntBASIC5.95□□□□□ -1.46
SOX4Q06945 MIR551A-201ENST00000385042 96 ntBASIC5.95□□□□□ -1.46
SOX4Q06945 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
SOX4Q06945 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.95□□□□□ -1.46
SOX4Q06945 TMEM183AP1-205ENST00000432739 290 ntBASIC5.95□□□□□ -1.46
SOX4Q06945 RPL36AP53-201ENST00000432891 316 ntBASIC5.95□□□□□ -1.46
SOX4Q06945 CYCSP6-201ENST00000434498 302 ntBASIC5.95□□□□□ -1.46
SOX4Q06945 KRT8P51-201ENST00000438938 274 ntBASIC5.95□□□□□ -1.46
SOX4Q06945 RPL5P25-201ENST00000441148 775 ntBASIC5.95□□□□□ -1.46
SOX4Q06945 AC239798.3-201ENST00000454459 408 ntBASIC5.95□□□□□ -1.46
SOX4Q06945 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC5.95□□□□□ -1.46
SOX4Q06945 AC130509.1-201ENST00000464158 433 ntBASIC5.95□□□□□ -1.46
SOX4Q06945 RPS3AP50-201ENST00000487064 803 ntBASIC5.95□□□□□ -1.46
SOX4Q06945 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SOX4Q06945 AC008638.1-201ENST00000506035 866 ntBASIC5.95□□□□□ -1.46
SOX4Q06945 PGAM1P13-201ENST00000507497 754 ntBASIC5.95□□□□□ -1.46
SOX4Q06945 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.95□□□□□ -1.46
SOX4Q06945 RNA5SP401-201ENST00000515920 127 ntBASIC5.95□□□□□ -1.46
SOX4Q06945 Vault.3-201ENST00000516676 95 ntBASIC5.95□□□□□ -1.46
SOX4Q06945 AC027308.1-201ENST00000517993 110 ntBASIC5.95□□□□□ -1.46
SOX4Q06945 OR5B19P-201ENST00000531766 928 ntBASIC5.95□□□□□ -1.46
SOX4Q06945 AC023050.3-201ENST00000541142 333 ntBASIC5.95□□□□□ -1.46
SOX4Q06945 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC5.95□□□□□ -1.46
SOX4Q06945 AC090502.2-201ENST00000549267 280 ntBASIC5.95□□□□□ -1.46
SOX4Q06945 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC5.95□□□□□ -1.46
SOX4Q06945 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.95□□□□□ -1.46
SOX4Q06945 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.95□□□□□ -1.46
SOX4Q06945 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.95□□□□□ -1.46
SOX4Q06945 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.95□□□□□ -1.46
SOX4Q06945 AC006116.10-201ENST00000591836 581 ntBASIC5.95□□□□□ -1.46
SOX4Q06945 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC5.95□□□□□ -1.46
SOX4Q06945 AC008966.2-201ENST00000606157 453 ntBASIC5.95□□□□□ -1.46
SOX4Q06945 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.95□□□□□ -1.46
SOX4Q06945 AL031658.2-201ENST00000616850 651 ntBASIC5.95□□□□□ -1.46
SOX4Q06945 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.95□□□□□ -1.46
SOX4Q06945 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC5.95□□□□□ -1.46
SOX4Q06945 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC5.95□□□□□ -1.46
SOX4Q06945 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC5.95□□□□□ -1.46
SOX4Q06945 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.95□□□□□ -1.46
SOX4Q06945 AP000550.3-201ENST00000637734 379 ntBASIC5.95□□□□□ -1.46
SOX4Q06945 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
SOX4Q06945 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SOX4Q06945 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.95□□□□□ -1.46
SOX4Q06945 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SOX4Q06945 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.95□□□□□ -1.46
SOX4Q06945 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
SOX4Q06945 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SOX4Q06945 PABPC1P6-201ENST00000445594 1829 ntBASIC5.95□□□□□ -1.46
SOX4Q06945 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SOX4Q06945 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms