Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.75□□□□□ -1.65
NKX6-1P78426 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC4.75□□□□□ -1.65
NKX6-1P78426 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.75□□□□□ -1.65
NKX6-1P78426 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.75□□□□□ -1.65
NKX6-1P78426 COX6CP8-201ENST00000522620 226 ntBASIC4.75□□□□□ -1.65
NKX6-1P78426 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.75□□□□□ -1.65
NKX6-1P78426 MTND4LP18-201ENST00000526864 291 ntBASIC4.75□□□□□ -1.65
NKX6-1P78426 OR5AP1P-201ENST00000529730 940 ntBASIC4.75□□□□□ -1.65
NKX6-1P78426 AC126177.5-201ENST00000549599 178 ntBASIC4.75□□□□□ -1.65
NKX6-1P78426 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.75□□□□□ -1.65
NKX6-1P78426 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.75□□□□□ -1.65
NKX6-1P78426 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.75□□□□□ -1.65
NKX6-1P78426 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.75□□□□□ -1.65
NKX6-1P78426 AC053481.3-201ENST00000577881 843 ntBASIC4.75□□□□□ -1.65
NKX6-1P78426 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.75□□□□□ -1.65
NKX6-1P78426 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.75□□□□□ -1.65
NKX6-1P78426 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.75□□□□□ -1.65
NKX6-1P78426 AL009028.1-201ENST00000604895 802 ntBASIC4.75□□□□□ -1.65
NKX6-1P78426 AC000068.2-201ENST00000608816 460 ntBASIC4.75□□□□□ -1.65
NKX6-1P78426 AC138932.5-201ENST00000617759 563 ntBASIC4.75□□□□□ -1.65
NKX6-1P78426 AC099842.1-201ENST00000619919 596 ntBASIC4.75□□□□□ -1.65
NKX6-1P78426 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.75□□□□□ -1.65
NKX6-1P78426 AC068792.1-201ENST00000621354 417 ntBASIC4.75□□□□□ -1.65
NKX6-1P78426 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.75□□□□□ -1.65
NKX6-1P78426 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.75□□□□□ -1.65
NKX6-1P78426 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NKX6-1P78426 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
NKX6-1P78426 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
NKX6-1P78426 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NKX6-1P78426 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.75□□□□□ -1.65
NKX6-1P78426 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
NKX6-1P78426 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
NKX6-1P78426 AC068870.1-201ENST00000563737 2455 ntBASIC4.74□□□□□ -1.65
NKX6-1P78426 AC104260.2-201ENST00000623551 3497 ntBASIC4.74□□□□□ -1.65
NKX6-1P78426 MTND5P29-201ENST00000458676 1807 ntBASIC4.74□□□□□ -1.65
NKX6-1P78426 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NKX6-1P78426 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
NKX6-1P78426 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NKX6-1P78426 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
NKX6-1P78426 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NKX6-1P78426 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC4.74□□□□□ -1.65
NKX6-1P78426 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NKX6-1P78426 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
NKX6-1P78426 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.74□□□□□ -1.65
NKX6-1P78426 Y_RNA.97-201ENST00000363094 102 ntBASIC4.74□□□□□ -1.65
NKX6-1P78426 RNU6-777P-201ENST00000364265 104 ntBASIC4.74□□□□□ -1.65
NKX6-1P78426 RNU6-878P-201ENST00000384578 110 ntBASIC4.74□□□□□ -1.65
NKX6-1P78426 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.74□□□□□ -1.65
NKX6-1P78426 MTATP6P27-201ENST00000416987 621 ntBASIC4.74□□□□□ -1.65
NKX6-1P78426 AC093162.1-201ENST00000419682 124 ntBASIC4.74□□□□□ -1.65
NKX6-1P78426 AC012065.2-201ENST00000421295 375 ntBASIC4.74□□□□□ -1.65
NKX6-1P78426 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.74□□□□□ -1.65
NKX6-1P78426 RIMKLBP2-201ENST00000424737 654 ntBASIC4.74□□□□□ -1.65
NKX6-1P78426 AL035410.1-201ENST00000427409 427 ntBASIC4.74□□□□□ -1.65
NKX6-1P78426 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC4.74□□□□□ -1.65
NKX6-1P78426 MUPP-201ENST00000438111 566 ntBASIC4.74□□□□□ -1.65
NKX6-1P78426 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.74□□□□□ -1.65
NKX6-1P78426 RPL21P133-201ENST00000443666 476 ntBASIC4.74□□□□□ -1.65
NKX6-1P78426 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC4.74□□□□□ -1.65
NKX6-1P78426 RPL7P31-201ENST00000450192 724 ntBASIC4.74□□□□□ -1.65
NKX6-1P78426 BX276092.4-201ENST00000452056 248 ntBASIC4.74□□□□□ -1.65
NKX6-1P78426 BX322784.1-201ENST00000455793 1077 ntBASIC4.74□□□□□ -1.65
NKX6-1P78426 OR6K1P-201ENST00000456766 971 ntBASIC4.74□□□□□ -1.65
NKX6-1P78426 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.74□□□□□ -1.65
NKX6-1P78426 AC090142.1-201ENST00000465776 462 ntBASIC4.74□□□□□ -1.65
NKX6-1P78426 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NKX6-1P78426 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.74□□□□□ -1.65
NKX6-1P78426 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC4.74□□□□□ -1.65
NKX6-1P78426 AC034159.1-201ENST00000513885 583 ntBASIC4.74□□□□□ -1.65
NKX6-1P78426 AC016065.2-201ENST00000514530 444 ntBASIC4.74□□□□□ -1.65
NKX6-1P78426 FABP5P5-201ENST00000515537 406 ntBASIC4.74□□□□□ -1.65
NKX6-1P78426 RNU6-405P-201ENST00000516637 110 ntBASIC4.74□□□□□ -1.65
NKX6-1P78426 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.74□□□□□ -1.65
NKX6-1P78426 IGLVIV-53-201ENST00000520107 367 ntBASIC4.74□□□□□ -1.65
NKX6-1P78426 AP001922.4-201ENST00000526967 290 ntBASIC4.74□□□□□ -1.65
NKX6-1P78426 AC022880.1-201ENST00000534017 973 ntBASIC4.74□□□□□ -1.65
NKX6-1P78426 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.74□□□□□ -1.65
NKX6-1P78426 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.74□□□□□ -1.65
NKX6-1P78426 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.74□□□□□ -1.65
NKX6-1P78426 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.74□□□□□ -1.65
NKX6-1P78426 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.74□□□□□ -1.65
NKX6-1P78426 AC090312.1-201ENST00000580637 348 ntBASIC4.74□□□□□ -1.65
NKX6-1P78426 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NKX6-1P78426 AC103792.1-201ENST00000603591 919 ntBASIC4.74□□□□□ -1.65
NKX6-1P78426 AC113194.1-201ENST00000606037 500 ntBASIC4.74□□□□□ -1.65
NKX6-1P78426 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.74□□□□□ -1.65
NKX6-1P78426 MIR4496-201ENST00000635896 61 ntBASIC4.74□□□□□ -1.65
NKX6-1P78426 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.74□□□□□ -1.65
NKX6-1P78426 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.74□□□□□ -1.65
NKX6-1P78426 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NKX6-1P78426 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
NKX6-1P78426 SAGE4P-201ENST00000442271 3381 ntBASIC4.74□□□□□ -1.65
NKX6-1P78426 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NKX6-1P78426 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.74□□□□□ -1.65
NKX6-1P78426 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NKX6-1P78426 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NKX6-1P78426 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.74□□□□□ -1.65
NKX6-1P78426 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
NKX6-1P78426 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.73□□□□□ -1.65
NKX6-1P78426 AC006378.2-201ENST00000623178 2476 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms