Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.12□□□□□ -1.91
UBA52P62987 AC010329.2-201ENST00000595195 2737 ntBASIC3.12□□□□□ -1.91
UBA52P62987 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
UBA52P62987 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.12□□□□□ -1.91
UBA52P62987 AC073346.2-201ENST00000624724 2058 ntBASIC3.12□□□□□ -1.91
UBA52P62987 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.11□□□□□ -1.91
UBA52P62987 MTND5P27-201ENST00000428871 1720 ntBASIC3.11□□□□□ -1.91
UBA52P62987 MTCO1P12-201ENST00000414273 1543 ntBASIC3.11□□□□□ -1.91
UBA52P62987 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
UBA52P62987 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
UBA52P62987 RNU6-1263P-201ENST00000384601 106 ntBASIC3.11□□□□□ -1.91
UBA52P62987 AC104297.1-201ENST00000393779 870 ntBASIC3.11□□□□□ -1.91
UBA52P62987 RNA5SP31-201ENST00000411144 127 ntBASIC3.11□□□□□ -1.91
UBA52P62987 GLRXP1-201ENST00000423261 334 ntBASIC3.11□□□□□ -1.91
UBA52P62987 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.11□□□□□ -1.91
UBA52P62987 AC091390.3-201ENST00000426478 338 ntBASIC3.11□□□□□ -1.91
UBA52P62987 HSPD1P21-201ENST00000436541 245 ntBASIC3.11□□□□□ -1.91
UBA52P62987 CYCSP43-201ENST00000438233 310 ntBASIC3.11□□□□□ -1.91
UBA52P62987 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.11□□□□□ -1.91
UBA52P62987 RPS3AP46-201ENST00000448352 682 ntBASIC3.11□□□□□ -1.91
UBA52P62987 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.11□□□□□ -1.91
UBA52P62987 RPL9P32-201ENST00000464118 620 ntBASIC3.11□□□□□ -1.91
UBA52P62987 PLGLA-201ENST00000465668 449 ntBASIC3.11□□□□□ -1.91
UBA52P62987 AC092185.1-201ENST00000491371 97 ntBASIC3.11□□□□□ -1.91
UBA52P62987 AC020893.1-201ENST00000502452 580 ntBASIC3.11□□□□□ -1.91
UBA52P62987 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.11□□□□□ -1.91
UBA52P62987 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.11□□□□□ -1.91
UBA52P62987 AC104619.4-201ENST00000510773 249 ntBASIC3.11□□□□□ -1.91
UBA52P62987 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
UBA52P62987 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.11□□□□□ -1.91
UBA52P62987 AC009948.4-201ENST00000604692 675 ntBASIC3.11□□□□□ -1.91
UBA52P62987 AC107294.3-201ENST00000609211 526 ntBASIC3.11□□□□□ -1.91
UBA52P62987 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
UBA52P62987 AC092326.2-201ENST00000624772 1561 ntBASIC3.11□□□□□ -1.91
UBA52P62987 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.11□□□□□ -1.91
UBA52P62987 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
UBA52P62987 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.1□□□□□ -1.91
UBA52P62987 AC032011.1-201ENST00000611703 1549 ntBASIC3.1□□□□□ -1.91
UBA52P62987 MIR30E-201ENST00000362104 92 ntBASIC3.1□□□□□ -1.91
UBA52P62987 SNORD3H-201ENST00000384486 214 ntBASIC3.1□□□□□ -1.91
UBA52P62987 RNU6-146P-201ENST00000384602 108 ntBASIC3.1□□□□□ -1.91
UBA52P62987 MIR183-201ENST00000384958 110 ntBASIC3.1□□□□□ -1.91
UBA52P62987 AC007066.1-201ENST00000392902 381 ntBASIC3.1□□□□□ -1.91
UBA52P62987 PTMAP5-201ENST00000393073 333 ntBASIC3.1□□□□□ -1.91
UBA52P62987 RNA5SP107-201ENST00000411358 122 ntBASIC3.1□□□□□ -1.91
UBA52P62987 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.1□□□□□ -1.91
UBA52P62987 AC245291.1-201ENST00000419501 328 ntBASIC3.1□□□□□ -1.91
UBA52P62987 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.1□□□□□ -1.91
UBA52P62987 RPL23AP22-201ENST00000437556 453 ntBASIC3.1□□□□□ -1.91
UBA52P62987 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.1□□□□□ -1.91
UBA52P62987 RPL23AP62-201ENST00000463396 453 ntBASIC3.1□□□□□ -1.91
UBA52P62987 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.1□□□□□ -1.91
UBA52P62987 AP001086.1-201ENST00000494882 321 ntBASIC3.1□□□□□ -1.91
UBA52P62987 AL035404.1-201ENST00000497982 568 ntBASIC3.1□□□□□ -1.91
UBA52P62987 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
UBA52P62987 CAB39P1-201ENST00000502277 460 ntBASIC3.1□□□□□ -1.91
UBA52P62987 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.1□□□□□ -1.91
UBA52P62987 FABP5P12-201ENST00000515543 389 ntBASIC3.1□□□□□ -1.91
UBA52P62987 SNORD116-26-201ENST00000516006 96 ntBASIC3.1□□□□□ -1.91
UBA52P62987 SCARNA14-201ENST00000516903 136 ntBASIC3.1□□□□□ -1.91
UBA52P62987 AC087369.1-201ENST00000520775 996 ntBASIC3.1□□□□□ -1.91
UBA52P62987 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
UBA52P62987 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.1□□□□□ -1.91
UBA52P62987 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.1□□□□□ -1.91
UBA52P62987 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC3.1□□□□□ -1.91
UBA52P62987 UBE2NP1-201ENST00000545592 458 ntBASIC3.1□□□□□ -1.91
UBA52P62987 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.1□□□□□ -1.91
UBA52P62987 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC3.1□□□□□ -1.91
UBA52P62987 AC008507.1-201ENST00000587506 734 ntBASIC3.1□□□□□ -1.91
UBA52P62987 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.1□□□□□ -1.91
UBA52P62987 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.1□□□□□ -1.91
UBA52P62987 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.1□□□□□ -1.91
UBA52P62987 AC099778.2-201ENST00000610904 211 ntBASIC3.1□□□□□ -1.91
UBA52P62987 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.1□□□□□ -1.91
UBA52P62987 AC073073.2-201ENST00000609827 2578 ntBASIC3.1□□□□□ -1.91
UBA52P62987 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
UBA52P62987 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
UBA52P62987 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
UBA52P62987 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
UBA52P62987 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
UBA52P62987 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.09□□□□□ -1.91
UBA52P62987 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
UBA52P62987 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
UBA52P62987 SNORA11C-201ENST00000408532 129 ntBASIC3.09□□□□□ -1.91
UBA52P62987 AC126124.2-201ENST00000413542 321 ntBASIC3.09□□□□□ -1.91
UBA52P62987 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.09□□□□□ -1.91
UBA52P62987 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.09□□□□□ -1.91
UBA52P62987 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.09□□□□□ -1.91
UBA52P62987 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.09□□□□□ -1.91
UBA52P62987 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.09□□□□□ -1.91
UBA52P62987 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.09□□□□□ -1.91
UBA52P62987 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.09□□□□□ -1.91
UBA52P62987 AC114967.1-201ENST00000504890 259 ntBASIC3.09□□□□□ -1.91
UBA52P62987 AC026427.2-201ENST00000506228 536 ntBASIC3.09□□□□□ -1.91
UBA52P62987 AC074250.1-201ENST00000511117 192 ntBASIC3.09□□□□□ -1.91
UBA52P62987 RN7SKP18-201ENST00000516005 275 ntBASIC3.09□□□□□ -1.91
UBA52P62987 RNA5SP380-201ENST00000517190 98 ntBASIC3.09□□□□□ -1.91
UBA52P62987 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.09□□□□□ -1.91
UBA52P62987 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.09□□□□□ -1.91
UBA52P62987 AC068657.1-201ENST00000520807 306 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms