Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 AL606490.9-201ENST00000603331 271 ntBASIC3.13□□□□□ -1.91
AP3S2P59780 SNORA62.6-201ENST00000606322 83 ntBASIC3.13□□□□□ -1.91
AP3S2P59780 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.13□□□□□ -1.91
AP3S2P59780 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC3.13□□□□□ -1.91
AP3S2P59780 AC022149.2-201ENST00000621061 203 ntBASIC3.13□□□□□ -1.91
AP3S2P59780 AL732618.1-201ENST00000623251 301 ntBASIC3.13□□□□□ -1.91
AP3S2P59780 AC009950.2-201ENST00000636548 183 ntBASIC3.13□□□□□ -1.91
AP3S2P59780 AF001550.2-201ENST00000636643 217 ntBASIC3.13□□□□□ -1.91
AP3S2P59780 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.13□□□□□ -1.91
AP3S2P59780 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
AP3S2P59780 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.12□□□□□ -1.91
AP3S2P59780 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.12□□□□□ -1.91
AP3S2P59780 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.12□□□□□ -1.91
AP3S2P59780 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
AP3S2P59780 MIR383-201ENST00000362257 73 ntBASIC3.12□□□□□ -1.91
AP3S2P59780 RNA5SP366-201ENST00000365454 123 ntBASIC3.12□□□□□ -1.91
AP3S2P59780 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.12□□□□□ -1.91
AP3S2P59780 SNORA11.3-201ENST00000408471 128 ntBASIC3.12□□□□□ -1.91
AP3S2P59780 RANP4-201ENST00000413361 655 ntBASIC3.12□□□□□ -1.91
AP3S2P59780 NUP35P2-201ENST00000416748 943 ntBASIC3.12□□□□□ -1.91
AP3S2P59780 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.12□□□□□ -1.91
AP3S2P59780 AC234782.4-201ENST00000417646 1048 ntBASIC3.12□□□□□ -1.91
AP3S2P59780 RPS15AP40-201ENST00000419621 391 ntBASIC3.12□□□□□ -1.91
AP3S2P59780 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.12□□□□□ -1.91
AP3S2P59780 AC079355.1-201ENST00000421770 223 ntBASIC3.12□□□□□ -1.91
AP3S2P59780 AL390879.2-203ENST00000426943 1121 ntBASIC3.12□□□□□ -1.91
AP3S2P59780 DPPA2P1-201ENST00000428060 556 ntBASIC3.12□□□□□ -1.91
AP3S2P59780 VN1R54P-201ENST00000435210 1049 ntBASIC3.12□□□□□ -1.91
AP3S2P59780 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.12□□□□□ -1.91
AP3S2P59780 TRIM60P18-201ENST00000441518 828 ntBASIC3.12□□□□□ -1.91
AP3S2P59780 AL357552.1-201ENST00000445254 415 ntBASIC3.12□□□□□ -1.91
AP3S2P59780 AC010655.1-201ENST00000449336 292 ntBASIC3.12□□□□□ -1.91
AP3S2P59780 AL513343.1-201ENST00000451818 792 ntBASIC3.12□□□□□ -1.91
AP3S2P59780 BX276092.4-201ENST00000452056 248 ntBASIC3.12□□□□□ -1.91
AP3S2P59780 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
AP3S2P59780 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.12□□□□□ -1.91
AP3S2P59780 Z95152.1-201ENST00000453556 656 ntBASIC3.12□□□□□ -1.91
AP3S2P59780 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.12□□□□□ -1.91
AP3S2P59780 RPL7P5-201ENST00000471472 736 ntBASIC3.12□□□□□ -1.91
AP3S2P59780 AC006483.1-201ENST00000487308 313 ntBASIC3.12□□□□□ -1.91
AP3S2P59780 AC021146.5-201ENST00000503544 545 ntBASIC3.12□□□□□ -1.91
AP3S2P59780 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.12□□□□□ -1.91
AP3S2P59780 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.12□□□□□ -1.91
AP3S2P59780 CCNHP1-201ENST00000513311 678 ntBASIC3.12□□□□□ -1.91
AP3S2P59780 IGKV2-36-201ENST00000519999 223 ntBASIC3.12□□□□□ -1.91
AP3S2P59780 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.12□□□□□ -1.91
AP3S2P59780 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC3.12□□□□□ -1.91
AP3S2P59780 EIF4EP5-201ENST00000528228 640 ntBASIC3.12□□□□□ -1.91
AP3S2P59780 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.12□□□□□ -1.91
AP3S2P59780 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.12□□□□□ -1.91
AP3S2P59780 TRAV37-201ENST00000553906 342 ntBASIC3.12□□□□□ -1.91
AP3S2P59780 AC006116.5-201ENST00000591936 559 ntBASIC3.12□□□□□ -1.91
AP3S2P59780 AL109653.1-201ENST00000603091 248 ntBASIC3.12□□□□□ -1.91
AP3S2P59780 AC005191.1-201ENST00000603950 358 ntBASIC3.12□□□□□ -1.91
AP3S2P59780 AL445222.1-201ENST00000607259 628 ntBASIC3.12□□□□□ -1.91
AP3S2P59780 MIR6826-201ENST00000617808 98 ntBASIC3.12□□□□□ -1.91
AP3S2P59780 SNORA11.6-201ENST00000619030 128 ntBASIC3.12□□□□□ -1.91
AP3S2P59780 MIR8059-201ENST00000620427 81 ntBASIC3.12□□□□□ -1.91
AP3S2P59780 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
AP3S2P59780 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.12□□□□□ -1.91
AP3S2P59780 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
AP3S2P59780 AC007823.1-201ENST00000569932 1566 ntBASIC3.12□□□□□ -1.91
AP3S2P59780 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
AP3S2P59780 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
AP3S2P59780 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
AP3S2P59780 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
AP3S2P59780 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
AP3S2P59780 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
AP3S2P59780 AL138880.1-201ENST00000405824 642 ntBASIC3.11□□□□□ -1.91
AP3S2P59780 HMGB3P18-201ENST00000406327 590 ntBASIC3.11□□□□□ -1.91
AP3S2P59780 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.11□□□□□ -1.91
AP3S2P59780 AC016397.1-201ENST00000412463 242 ntBASIC3.11□□□□□ -1.91
AP3S2P59780 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC3.11□□□□□ -1.91
AP3S2P59780 AC105402.1-201ENST00000413336 545 ntBASIC3.11□□□□□ -1.91
AP3S2P59780 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.11□□□□□ -1.91
AP3S2P59780 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.11□□□□□ -1.91
AP3S2P59780 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.11□□□□□ -1.91
AP3S2P59780 RPL7P46-201ENST00000425129 740 ntBASIC3.11□□□□□ -1.91
AP3S2P59780 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
AP3S2P59780 RPL23AP22-201ENST00000437556 453 ntBASIC3.11□□□□□ -1.91
AP3S2P59780 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.11□□□□□ -1.91
AP3S2P59780 AC023512.1-201ENST00000444513 499 ntBASIC3.11□□□□□ -1.91
AP3S2P59780 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.11□□□□□ -1.91
AP3S2P59780 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
AP3S2P59780 RPL7P59-201ENST00000447700 943 ntBASIC3.11□□□□□ -1.91
AP3S2P59780 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.11□□□□□ -1.91
AP3S2P59780 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC3.11□□□□□ -1.91
AP3S2P59780 AC144530.1-201ENST00000452862 555 ntBASIC3.11□□□□□ -1.91
AP3S2P59780 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
AP3S2P59780 RPS15AP1-201ENST00000457423 391 ntBASIC3.11□□□□□ -1.91
AP3S2P59780 AC089999.1-201ENST00000460336 374 ntBASIC3.11□□□□□ -1.91
AP3S2P59780 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
AP3S2P59780 AC004453.1-201ENST00000487895 408 ntBASIC3.11□□□□□ -1.91
AP3S2P59780 HMGB1P38-201ENST00000490557 577 ntBASIC3.11□□□□□ -1.91
AP3S2P59780 SNORA64.4-201ENST00000516632 81 ntBASIC3.11□□□□□ -1.91
AP3S2P59780 SNORA70.19-201ENST00000516717 90 ntBASIC3.11□□□□□ -1.91
AP3S2P59780 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.11□□□□□ -1.91
AP3S2P59780 NDUFA5P2-201ENST00000519723 344 ntBASIC3.11□□□□□ -1.91
AP3S2P59780 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.11□□□□□ -1.91
AP3S2P59780 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms