Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CLDN20P56880 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.13□□□□□ -1.75
CLDN20P56880 Y_RNA.625-201ENST00000411256 107 ntBASIC4.13□□□□□ -1.75
CLDN20P56880 MTND4P22-201ENST00000413116 1169 ntBASIC4.13□□□□□ -1.75
CLDN20P56880 AL161449.1-201ENST00000414531 1199 ntBASIC4.13□□□□□ -1.75
CLDN20P56880 AL807761.1-201ENST00000417622 171 ntBASIC4.13□□□□□ -1.75
CLDN20P56880 AC006960.1-201ENST00000419980 153 ntBASIC4.13□□□□□ -1.75
CLDN20P56880 UQCRBP1-201ENST00000421129 336 ntBASIC4.13□□□□□ -1.75
CLDN20P56880 RPL7P53-201ENST00000421245 739 ntBASIC4.13□□□□□ -1.75
CLDN20P56880 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.13□□□□□ -1.75
CLDN20P56880 IPMKP1-201ENST00000425988 855 ntBASIC4.13□□□□□ -1.75
CLDN20P56880 RPL23AP1-201ENST00000428990 471 ntBASIC4.13□□□□□ -1.75
CLDN20P56880 SKP1P3-201ENST00000429280 487 ntBASIC4.13□□□□□ -1.75
CLDN20P56880 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.13□□□□□ -1.75
CLDN20P56880 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.13□□□□□ -1.75
CLDN20P56880 RPS6P4-201ENST00000494693 758 ntBASIC4.13□□□□□ -1.75
CLDN20P56880 RPL30P11-201ENST00000495304 339 ntBASIC4.13□□□□□ -1.75
CLDN20P56880 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CLDN20P56880 AK3P4-201ENST00000504283 583 ntBASIC4.13□□□□□ -1.75
CLDN20P56880 AC079395.1-201ENST00000510981 262 ntBASIC4.13□□□□□ -1.75
CLDN20P56880 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.13□□□□□ -1.75
CLDN20P56880 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.13□□□□□ -1.75
CLDN20P56880 AC090151.1-201ENST00000520784 730 ntBASIC4.13□□□□□ -1.75
CLDN20P56880 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.13□□□□□ -1.75
CLDN20P56880 AP001189.2-201ENST00000527320 189 ntBASIC4.13□□□□□ -1.75
CLDN20P56880 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.13□□□□□ -1.75
CLDN20P56880 DUXAP1-201ENST00000556632 463 ntBASIC4.13□□□□□ -1.75
CLDN20P56880 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.13□□□□□ -1.75
CLDN20P56880 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.13□□□□□ -1.75
CLDN20P56880 AL132657.2-201ENST00000564417 358 ntBASIC4.13□□□□□ -1.75
CLDN20P56880 AC093519.1-201ENST00000566109 298 ntBASIC4.13□□□□□ -1.75
CLDN20P56880 AC015912.2-201ENST00000571053 181 ntBASIC4.13□□□□□ -1.75
CLDN20P56880 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.13□□□□□ -1.75
CLDN20P56880 AC069061.3-201ENST00000582254 823 ntBASIC4.13□□□□□ -1.75
CLDN20P56880 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.13□□□□□ -1.75
CLDN20P56880 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.13□□□□□ -1.75
CLDN20P56880 AC020634.1-201ENST00000608701 549 ntBASIC4.13□□□□□ -1.75
CLDN20P56880 AL450489.1-201ENST00000612071 468 ntBASIC4.13□□□□□ -1.75
CLDN20P56880 AC009318.3-201ENST00000616916 503 ntBASIC4.13□□□□□ -1.75
CLDN20P56880 AC007490.1-201ENST00000624321 703 ntBASIC4.13□□□□□ -1.75
CLDN20P56880 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.13□□□□□ -1.75
CLDN20P56880 AL049536.1-201ENST00000625043 744 ntBASIC4.13□□□□□ -1.75
CLDN20P56880 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.13□□□□□ -1.75
CLDN20P56880 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CLDN20P56880 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.13□□□□□ -1.75
CLDN20P56880 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.13□□□□□ -1.75
CLDN20P56880 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CLDN20P56880 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLDN20P56880 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLDN20P56880 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLDN20P56880 AP000776.1-201ENST00000530032 1663 ntBASIC4.13□□□□□ -1.75
CLDN20P56880 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLDN20P56880 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLDN20P56880 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CLDN20P56880 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLDN20P56880 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLDN20P56880 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CLDN20P56880 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.12□□□□□ -1.75
CLDN20P56880 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLDN20P56880 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CLDN20P56880 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.12□□□□□ -1.75
CLDN20P56880 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLDN20P56880 OR52B1P-201ENST00000316506 909 ntBASIC4.12□□□□□ -1.75
CLDN20P56880 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CLDN20P56880 RNU6-115P-201ENST00000364310 107 ntBASIC4.12□□□□□ -1.75
CLDN20P56880 RNU6-157P-201ENST00000383957 107 ntBASIC4.12□□□□□ -1.75
CLDN20P56880 RNU6-146P-201ENST00000384602 108 ntBASIC4.12□□□□□ -1.75
CLDN20P56880 TAF9BP1-201ENST00000396646 746 ntBASIC4.12□□□□□ -1.75
CLDN20P56880 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC4.12□□□□□ -1.75
CLDN20P56880 RNA5SP39-201ENST00000411245 120 ntBASIC4.12□□□□□ -1.75
CLDN20P56880 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.12□□□□□ -1.75
CLDN20P56880 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.12□□□□□ -1.75
CLDN20P56880 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.12□□□□□ -1.75
CLDN20P56880 AL139421.1-201ENST00000423010 169 ntBASIC4.12□□□□□ -1.75
CLDN20P56880 RPS12P5-201ENST00000423449 371 ntBASIC4.12□□□□□ -1.75
CLDN20P56880 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.12□□□□□ -1.75
CLDN20P56880 RPL12P34-201ENST00000424532 479 ntBASIC4.12□□□□□ -1.75
CLDN20P56880 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC4.12□□□□□ -1.75
CLDN20P56880 ATP5F1P1-201ENST00000433775 569 ntBASIC4.12□□□□□ -1.75
CLDN20P56880 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.12□□□□□ -1.75
CLDN20P56880 AC104978.1-201ENST00000449387 391 ntBASIC4.12□□□□□ -1.75
CLDN20P56880 TPT1P13-201ENST00000449760 499 ntBASIC4.12□□□□□ -1.75
CLDN20P56880 ISCUP1-201ENST00000454451 448 ntBASIC4.12□□□□□ -1.75
CLDN20P56880 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.12□□□□□ -1.75
CLDN20P56880 AC010307.1-201ENST00000467206 836 ntBASIC4.12□□□□□ -1.75
CLDN20P56880 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CLDN20P56880 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.12□□□□□ -1.75
CLDN20P56880 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.12□□□□□ -1.75
CLDN20P56880 FTH1P24-201ENST00000503502 462 ntBASIC4.12□□□□□ -1.75
CLDN20P56880 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC4.12□□□□□ -1.75
CLDN20P56880 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.12□□□□□ -1.75
CLDN20P56880 AC025674.1-201ENST00000507074 324 ntBASIC4.12□□□□□ -1.75
CLDN20P56880 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.12□□□□□ -1.75
CLDN20P56880 OR5H4P-201ENST00000510851 923 ntBASIC4.12□□□□□ -1.75
CLDN20P56880 KRT19P6-201ENST00000510983 209 ntBASIC4.12□□□□□ -1.75
CLDN20P56880 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.12□□□□□ -1.75
CLDN20P56880 AC109445.1-201ENST00000512356 383 ntBASIC4.12□□□□□ -1.75
CLDN20P56880 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.12□□□□□ -1.75
CLDN20P56880 SOD1P3-201ENST00000518682 454 ntBASIC4.12□□□□□ -1.75
CLDN20P56880 CA1-215ENST00000522389 551 ntTSL 3 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms