Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 AP000943.4-201ENST00000622912 357 ntBASIC4.14□□□□□ -1.75
PEX3P56589 AC067852.7-201ENST00000623270 535 ntBASIC4.14□□□□□ -1.75
PEX3P56589 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.14□□□□□ -1.75
PEX3P56589 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PEX3P56589 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.13□□□□□ -1.75
PEX3P56589 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
PEX3P56589 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
PEX3P56589 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
PEX3P56589 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PEX3P56589 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.13□□□□□ -1.75
PEX3P56589 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PEX3P56589 RNA5SP124-201ENST00000362739 110 ntBASIC4.13□□□□□ -1.75
PEX3P56589 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PEX3P56589 RPL7P60-201ENST00000397636 735 ntBASIC4.13□□□□□ -1.75
PEX3P56589 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.13□□□□□ -1.75
PEX3P56589 RNU6ATAC-201ENST00000408749 126 ntBASIC4.13□□□□□ -1.75
PEX3P56589 MIR1183-201ENST00000408856 89 ntBASIC4.13□□□□□ -1.75
PEX3P56589 MTCO3P4-201ENST00000419236 787 ntBASIC4.13□□□□□ -1.75
PEX3P56589 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.13□□□□□ -1.75
PEX3P56589 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.13□□□□□ -1.75
PEX3P56589 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.13□□□□□ -1.75
PEX3P56589 AL356535.1-201ENST00000440335 398 ntBASIC4.13□□□□□ -1.75
PEX3P56589 AL158053.1-201ENST00000441503 453 ntBASIC4.13□□□□□ -1.75
PEX3P56589 RPL34P26-201ENST00000445636 354 ntBASIC4.13□□□□□ -1.75
PEX3P56589 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.13□□□□□ -1.75
PEX3P56589 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.13□□□□□ -1.75
PEX3P56589 S100A11P1-201ENST00000477525 312 ntBASIC4.13□□□□□ -1.75
PEX3P56589 ACTR3P3-201ENST00000480448 893 ntBASIC4.13□□□□□ -1.75
PEX3P56589 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.13□□□□□ -1.75
PEX3P56589 AC020593.1-201ENST00000507399 299 ntBASIC4.13□□□□□ -1.75
PEX3P56589 MTCO3P27-201ENST00000514397 196 ntBASIC4.13□□□□□ -1.75
PEX3P56589 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.13□□□□□ -1.75
PEX3P56589 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.13□□□□□ -1.75
PEX3P56589 RFPL1S-203ENST00000539579 330 ntBASIC4.13□□□□□ -1.75
PEX3P56589 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.13□□□□□ -1.75
PEX3P56589 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PEX3P56589 AL360157.1-201ENST00000565962 87 ntBASIC4.13□□□□□ -1.75
PEX3P56589 AC244505.7-201ENST00000599675 272 ntBASIC4.13□□□□□ -1.75
PEX3P56589 AC133794.1-201ENST00000602731 914 ntBASIC4.13□□□□□ -1.75
PEX3P56589 AC079610.2-201ENST00000604818 690 ntBASIC4.13□□□□□ -1.75
PEX3P56589 BRDTP1-201ENST00000605735 677 ntBASIC4.13□□□□□ -1.75
PEX3P56589 RNU1-30P-201ENST00000606575 163 ntBASIC4.13□□□□□ -1.75
PEX3P56589 AC010872.1-201ENST00000624225 675 ntBASIC4.13□□□□□ -1.75
PEX3P56589 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
PEX3P56589 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC4.13□□□□□ -1.75
PEX3P56589 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PEX3P56589 AL627171.1-201ENST00000618845 1308 ntBASIC4.13□□□□□ -1.75
PEX3P56589 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PEX3P56589 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PEX3P56589 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.13□□□□□ -1.75
PEX3P56589 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PEX3P56589 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PEX3P56589 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PEX3P56589 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PEX3P56589 AC027287.1-201ENST00000553115 1453 ntBASIC4.12□□□□□ -1.75
PEX3P56589 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
PEX3P56589 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.12□□□□□ -1.75
PEX3P56589 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
PEX3P56589 METTL21EP-201ENST00000298105 713 ntBASIC4.12□□□□□ -1.75
PEX3P56589 MIR16-2-201ENST00000362117 81 ntBASIC4.12□□□□□ -1.75
PEX3P56589 SNORD56.4-201ENST00000363883 71 ntBASIC4.12□□□□□ -1.75
PEX3P56589 RNU6-452P-201ENST00000384406 107 ntBASIC4.12□□□□□ -1.75
PEX3P56589 SNORD3H-201ENST00000384486 214 ntBASIC4.12□□□□□ -1.75
PEX3P56589 RNA5SP424-201ENST00000390988 115 ntBASIC4.12□□□□□ -1.75
PEX3P56589 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PEX3P56589 AL445183.3-201ENST00000414168 502 ntBASIC4.12□□□□□ -1.75
PEX3P56589 TCEA1P2-201ENST00000420496 906 ntBASIC4.12□□□□□ -1.75
PEX3P56589 AC005189.1-201ENST00000431286 310 ntBASIC4.12□□□□□ -1.75
PEX3P56589 AL035246.1-201ENST00000433554 1255 ntBASIC4.12□□□□□ -1.75
PEX3P56589 RPL7P28-201ENST00000437739 740 ntBASIC4.12□□□□□ -1.75
PEX3P56589 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.12□□□□□ -1.75
PEX3P56589 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PEX3P56589 YWHAQP9-201ENST00000445891 512 ntBASIC4.12□□□□□ -1.75
PEX3P56589 CASP3P1-201ENST00000446037 609 ntBASIC4.12□□□□□ -1.75
PEX3P56589 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
PEX3P56589 AC006480.1-201ENST00000449887 378 ntBASIC4.12□□□□□ -1.75
PEX3P56589 AC239809.1-201ENST00000450470 217 ntBASIC4.12□□□□□ -1.75
PEX3P56589 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC4.12□□□□□ -1.75
PEX3P56589 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.12□□□□□ -1.75
PEX3P56589 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.12□□□□□ -1.75
PEX3P56589 SAP18P1-201ENST00000512058 390 ntBASIC4.12□□□□□ -1.75
PEX3P56589 AC010342.1-201ENST00000514047 877 ntBASIC4.12□□□□□ -1.75
PEX3P56589 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.12□□□□□ -1.75
PEX3P56589 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.12□□□□□ -1.75
PEX3P56589 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PEX3P56589 MED28P5-201ENST00000528254 438 ntBASIC4.12□□□□□ -1.75
PEX3P56589 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC4.12□□□□□ -1.75
PEX3P56589 AC107016.1-201ENST00000550463 337 ntBASIC4.12□□□□□ -1.75
PEX3P56589 AC068446.3-201ENST00000555285 382 ntBASIC4.12□□□□□ -1.75
PEX3P56589 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC4.12□□□□□ -1.75
PEX3P56589 AC124283.4-201ENST00000581815 456 ntBASIC4.12□□□□□ -1.75
PEX3P56589 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.12□□□□□ -1.75
PEX3P56589 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.12□□□□□ -1.75
PEX3P56589 AC112230.1-201ENST00000604342 547 ntBASIC4.12□□□□□ -1.75
PEX3P56589 AC112503.2-201ENST00000609005 552 ntBASIC4.12□□□□□ -1.75
PEX3P56589 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.12□□□□□ -1.75
PEX3P56589 AC091905.1-201ENST00000624400 311 ntBASIC4.12□□□□□ -1.75
PEX3P56589 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC4.12□□□□□ -1.75
PEX3P56589 AC083865.1-201ENST00000636634 831 ntBASIC4.12□□□□□ -1.75
PEX3P56589 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 148.2 ms