Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.63□□□□□ -1.67
HDAC4P56524 AL079342.2-201ENST00000403367 482 ntBASIC4.63□□□□□ -1.67
HDAC4P56524 HNRNPDP2-201ENST00000406475 478 ntBASIC4.63□□□□□ -1.67
HDAC4P56524 RN7SKP27-201ENST00000410684 333 ntBASIC4.63□□□□□ -1.67
HDAC4P56524 SNORA74C-2-201ENST00000411179 201 ntBASIC4.63□□□□□ -1.67
HDAC4P56524 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.63□□□□□ -1.67
HDAC4P56524 AL139095.3-201ENST00000419672 1203 ntBASIC4.63□□□□□ -1.67
HDAC4P56524 RPL17P36-201ENST00000420302 549 ntBASIC4.63□□□□□ -1.67
HDAC4P56524 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.63□□□□□ -1.67
HDAC4P56524 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.63□□□□□ -1.67
HDAC4P56524 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.63□□□□□ -1.67
HDAC4P56524 RPL23AP25-201ENST00000430973 463 ntBASIC4.63□□□□□ -1.67
HDAC4P56524 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.63□□□□□ -1.67
HDAC4P56524 RPEP2-201ENST00000432149 701 ntBASIC4.63□□□□□ -1.67
HDAC4P56524 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HDAC4P56524 RPS27AP15-201ENST00000447672 466 ntBASIC4.63□□□□□ -1.67
HDAC4P56524 DDX39BP2-208ENST00000453923 258 ntBASIC4.63□□□□□ -1.67
HDAC4P56524 RPS27AP17-201ENST00000463344 455 ntBASIC4.63□□□□□ -1.67
HDAC4P56524 AC053481.1-201ENST00000467217 306 ntBASIC4.63□□□□□ -1.67
HDAC4P56524 RPL21P126-201ENST00000470049 478 ntBASIC4.63□□□□□ -1.67
HDAC4P56524 S100A11P1-201ENST00000477525 312 ntBASIC4.63□□□□□ -1.67
HDAC4P56524 AC015724.1-201ENST00000478577 156 ntBASIC4.63□□□□□ -1.67
HDAC4P56524 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.63□□□□□ -1.67
HDAC4P56524 AC023632.1-201ENST00000518463 375 ntBASIC4.63□□□□□ -1.67
HDAC4P56524 MTATP6P15-201ENST00000527233 835 ntBASIC4.63□□□□□ -1.67
HDAC4P56524 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.63□□□□□ -1.67
HDAC4P56524 AC044913.1-201ENST00000557200 430 ntBASIC4.63□□□□□ -1.67
HDAC4P56524 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC4.63□□□□□ -1.67
HDAC4P56524 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HDAC4P56524 BPTFP1-201ENST00000579209 492 ntBASIC4.63□□□□□ -1.67
HDAC4P56524 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC4.63□□□□□ -1.67
HDAC4P56524 AC069366.1-201ENST00000583159 838 ntBASIC4.63□□□□□ -1.67
HDAC4P56524 SLC25A36P1-201ENST00000590111 465 ntBASIC4.63□□□□□ -1.67
HDAC4P56524 RPL12P25-202ENST00000598100 674 ntBASIC4.63□□□□□ -1.67
HDAC4P56524 AC091057.2-201ENST00000602594 792 ntBASIC4.63□□□□□ -1.67
HDAC4P56524 AC025946.2-201ENST00000603398 234 ntBASIC4.63□□□□□ -1.67
HDAC4P56524 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.63□□□□□ -1.67
HDAC4P56524 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.63□□□□□ -1.67
HDAC4P56524 AC012409.3-201ENST00000611343 981 ntBASIC4.63□□□□□ -1.67
HDAC4P56524 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
HDAC4P56524 AC006065.6-201ENST00000625201 545 ntBASIC4.63□□□□□ -1.67
HDAC4P56524 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.63□□□□□ -1.67
HDAC4P56524 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
HDAC4P56524 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.63□□□□□ -1.67
HDAC4P56524 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
HDAC4P56524 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
HDAC4P56524 AC005261.4-201ENST00000600047 1385 ntBASIC4.63□□□□□ -1.67
HDAC4P56524 AC025263.3-201ENST00000622965 1396 ntBASIC4.63□□□□□ -1.67
HDAC4P56524 SGO1P1-201ENST00000603525 1447 ntBASIC4.63□□□□□ -1.67
HDAC4P56524 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HDAC4P56524 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HDAC4P56524 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HDAC4P56524 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HDAC4P56524 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
HDAC4P56524 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
HDAC4P56524 RNU4-92P-201ENST00000363783 136 ntBASIC4.62□□□□□ -1.67
HDAC4P56524 OR1L1-202ENST00000373686 1083 ntBASIC4.62□□□□□ -1.67
HDAC4P56524 RNU1-44P-201ENST00000384453 163 ntBASIC4.62□□□□□ -1.67
HDAC4P56524 TAS2R15P-201ENST00000390674 928 ntBASIC4.62□□□□□ -1.67
HDAC4P56524 SNORA40.2-201ENST00000390847 128 ntBASIC4.62□□□□□ -1.67
HDAC4P56524 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
HDAC4P56524 SNRPFP1-201ENST00000414761 252 ntBASIC4.62□□□□□ -1.67
HDAC4P56524 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.62□□□□□ -1.67
HDAC4P56524 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.62□□□□□ -1.67
HDAC4P56524 RPL7P34-201ENST00000433316 712 ntBASIC4.62□□□□□ -1.67
HDAC4P56524 AC023347.2-201ENST00000433994 462 ntBASIC4.62□□□□□ -1.67
HDAC4P56524 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.62□□□□□ -1.67
HDAC4P56524 MTCO2P20-201ENST00000437339 673 ntBASIC4.62□□□□□ -1.67
HDAC4P56524 AC105402.2-201ENST00000438503 358 ntBASIC4.62□□□□□ -1.67
HDAC4P56524 UBE2V1P3-201ENST00000439651 417 ntBASIC4.62□□□□□ -1.67
HDAC4P56524 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.62□□□□□ -1.67
HDAC4P56524 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.62□□□□□ -1.67
HDAC4P56524 RPL7P31-201ENST00000450192 724 ntBASIC4.62□□□□□ -1.67
HDAC4P56524 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC4.62□□□□□ -1.67
HDAC4P56524 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.62□□□□□ -1.67
HDAC4P56524 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.62□□□□□ -1.67
HDAC4P56524 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.62□□□□□ -1.67
HDAC4P56524 RPL23AP44-201ENST00000482216 473 ntBASIC4.62□□□□□ -1.67
HDAC4P56524 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
HDAC4P56524 RN7SKP92-201ENST00000517266 244 ntBASIC4.62□□□□□ -1.67
HDAC4P56524 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.62□□□□□ -1.67
HDAC4P56524 MTND2P38-201ENST00000522536 667 ntBASIC4.62□□□□□ -1.67
HDAC4P56524 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.62□□□□□ -1.67
HDAC4P56524 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC4.62□□□□□ -1.67
HDAC4P56524 DEFB109D-201ENST00000529497 240 ntBASIC4.62□□□□□ -1.67
HDAC4P56524 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.62□□□□□ -1.67
HDAC4P56524 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.62□□□□□ -1.67
HDAC4P56524 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.62□□□□□ -1.67
HDAC4P56524 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.62□□□□□ -1.67
HDAC4P56524 RPL23AP97-201ENST00000568955 471 ntBASIC4.62□□□□□ -1.67
HDAC4P56524 MIR5708-201ENST00000579723 85 ntBASIC4.62□□□□□ -1.67
HDAC4P56524 MIR4666A-201ENST00000580160 79 ntBASIC4.62□□□□□ -1.67
HDAC4P56524 AC019193.2-201ENST00000610012 634 ntBASIC4.62□□□□□ -1.67
HDAC4P56524 AC048344.4-201ENST00000619744 527 ntBASIC4.62□□□□□ -1.67
HDAC4P56524 AC022079.1-201ENST00000621546 602 ntBASIC4.62□□□□□ -1.67
HDAC4P56524 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.62□□□□□ -1.67
HDAC4P56524 AP006248.2-201ENST00000623309 592 ntBASIC4.62□□□□□ -1.67
HDAC4P56524 AC007546.2-201ENST00000623996 360 ntBASIC4.62□□□□□ -1.67
HDAC4P56524 AC068057.2-201ENST00000624047 895 ntBASIC4.62□□□□□ -1.67
HDAC4P56524 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms