Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.27□□□□□ -1.73
CDH12P55289 OR5AK1P-201ENST00000524837 922 ntBASIC4.27□□□□□ -1.73
CDH12P55289 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.27□□□□□ -1.73
CDH12P55289 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.27□□□□□ -1.73
CDH12P55289 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CDH12P55289 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.27□□□□□ -1.73
CDH12P55289 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.27□□□□□ -1.73
CDH12P55289 WISP1-OT1-201ENST00000602893 642 ntBASIC4.27□□□□□ -1.73
CDH12P55289 AC123786.2-201ENST00000603459 275 ntBASIC4.27□□□□□ -1.73
CDH12P55289 AC004948.1-201ENST00000609858 672 ntBASIC4.27□□□□□ -1.73
CDH12P55289 AC245297.2-201ENST00000610119 565 ntBASIC4.27□□□□□ -1.73
CDH12P55289 AC005962.2-201ENST00000611427 652 ntBASIC4.27□□□□□ -1.73
CDH12P55289 AC026634.1-201ENST00000634369 198 ntBASIC4.27□□□□□ -1.73
CDH12P55289 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CDH12P55289 AC015813.6-201ENST00000624409 5808 ntBASIC4.27□□□□□ -1.73
CDH12P55289 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
CDH12P55289 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
CDH12P55289 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDH12P55289 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDH12P55289 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC4.27□□□□□ -1.73
CDH12P55289 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CDH12P55289 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDH12P55289 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDH12P55289 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CDH12P55289 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CDH12P55289 LINC01109-201ENST00000603837 3081 ntBASIC4.26□□□□□ -1.73
CDH12P55289 CDR1-202ENST00000625883 1485 ntBASIC4.26□□□□□ -1.73
CDH12P55289 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDH12P55289 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CDH12P55289 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.26□□□□□ -1.73
CDH12P55289 AL391684.1-202ENST00000641293 1636 ntBASIC4.26□□□□□ -1.73
CDH12P55289 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CDH12P55289 RNA5SP191-201ENST00000362585 102 ntBASIC4.26□□□□□ -1.73
CDH12P55289 Y_RNA.77-201ENST00000362962 107 ntBASIC4.26□□□□□ -1.73
CDH12P55289 RNU4-24P-201ENST00000364565 139 ntBASIC4.26□□□□□ -1.73
CDH12P55289 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC4.26□□□□□ -1.73
CDH12P55289 MTCO3P31-201ENST00000405526 789 ntBASIC4.26□□□□□ -1.73
CDH12P55289 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CDH12P55289 HSFY4P-201ENST00000415994 1181 ntBASIC4.26□□□□□ -1.73
CDH12P55289 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CDH12P55289 RBMY2KP-201ENST00000418221 992 ntBASIC4.26□□□□□ -1.73
CDH12P55289 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CDH12P55289 MTCO3P1-205ENST00000422088 832 ntBASIC4.26□□□□□ -1.73
CDH12P55289 AC233981.1-201ENST00000423224 461 ntBASIC4.26□□□□□ -1.73
CDH12P55289 AC009965.2-201ENST00000425328 970 ntBASIC4.26□□□□□ -1.73
CDH12P55289 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.26□□□□□ -1.73
CDH12P55289 AL035407.1-201ENST00000429211 571 ntBASIC4.26□□□□□ -1.73
CDH12P55289 IFNNP1-201ENST00000429219 553 ntBASIC4.26□□□□□ -1.73
CDH12P55289 AL589823.1-201ENST00000429577 183 ntBASIC4.26□□□□□ -1.73
CDH12P55289 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.26□□□□□ -1.73
CDH12P55289 B3GNT2P1-201ENST00000434960 952 ntBASIC4.26□□□□□ -1.73
CDH12P55289 AC129850.1-201ENST00000436203 508 ntBASIC4.26□□□□□ -1.73
CDH12P55289 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CDH12P55289 TAF9P1-201ENST00000445421 515 ntBASIC4.26□□□□□ -1.73
CDH12P55289 MTCO2P7-201ENST00000446518 666 ntBASIC4.26□□□□□ -1.73
CDH12P55289 AC009961.3-201ENST00000449832 765 ntBASIC4.26□□□□□ -1.73
CDH12P55289 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.26□□□□□ -1.73
CDH12P55289 MTCO3P16-201ENST00000454456 754 ntBASIC4.26□□□□□ -1.73
CDH12P55289 TAF9P2-201ENST00000454958 515 ntBASIC4.26□□□□□ -1.73
CDH12P55289 SETP11-201ENST00000473027 690 ntBASIC4.26□□□□□ -1.73
CDH12P55289 RPS6P4-201ENST00000494693 758 ntBASIC4.26□□□□□ -1.73
CDH12P55289 AC092045.1-201ENST00000495716 1231 ntBASIC4.26□□□□□ -1.73
CDH12P55289 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC4.26□□□□□ -1.73
CDH12P55289 ATP1B1P1-201ENST00000509767 915 ntBASIC4.26□□□□□ -1.73
CDH12P55289 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.26□□□□□ -1.73
CDH12P55289 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.26□□□□□ -1.73
CDH12P55289 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.26□□□□□ -1.73
CDH12P55289 MTCO1P30-201ENST00000515244 580 ntBASIC4.26□□□□□ -1.73
CDH12P55289 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC4.26□□□□□ -1.73
CDH12P55289 RNU6-678P-201ENST00000516832 109 ntBASIC4.26□□□□□ -1.73
CDH12P55289 AC027309.2-201ENST00000520566 192 ntBASIC4.26□□□□□ -1.73
CDH12P55289 AC100770.1-201ENST00000532310 322 ntBASIC4.26□□□□□ -1.73
CDH12P55289 AC005951.1-201ENST00000576706 485 ntBASIC4.26□□□□□ -1.73
CDH12P55289 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.26□□□□□ -1.73
CDH12P55289 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.26□□□□□ -1.73
CDH12P55289 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.26□□□□□ -1.73
CDH12P55289 AC233280.2-201ENST00000603917 1070 ntBASIC4.26□□□□□ -1.73
CDH12P55289 AC006270.3-201ENST00000605967 1036 ntBASIC4.26□□□□□ -1.73
CDH12P55289 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.26□□□□□ -1.73
CDH12P55289 AC016769.4-201ENST00000616893 535 ntBASIC4.26□□□□□ -1.73
CDH12P55289 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDH12P55289 AC120349.2-201ENST00000625002 298 ntBASIC4.26□□□□□ -1.73
CDH12P55289 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CDH12P55289 Z95327.2-201ENST00000414579 1873 ntBASIC4.26□□□□□ -1.73
CDH12P55289 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CDH12P55289 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDH12P55289 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDH12P55289 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDH12P55289 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDH12P55289 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CDH12P55289 AC011477.1-204ENST00000623416 1325 ntBASIC4.25□□□□□ -1.73
CDH12P55289 AL390862.1-201ENST00000635467 1469 ntBASIC4.25□□□□□ -1.73
CDH12P55289 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
CDH12P55289 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDH12P55289 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDH12P55289 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.25□□□□□ -1.73
CDH12P55289 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CDH12P55289 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CDH12P55289 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDH12P55289 RNU1-94P-201ENST00000362627 173 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms