Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.02□□□□□ -1.77
CDH11P55287 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC4.02□□□□□ -1.77
CDH11P55287 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
CDH11P55287 AC024257.5-201ENST00000612739 531 ntBASIC4.02□□□□□ -1.77
CDH11P55287 AC107075.1-201ENST00000613695 314 ntBASIC4.02□□□□□ -1.77
CDH11P55287 AL133243.1-201ENST00000614487 366 ntBASIC4.02□□□□□ -1.77
CDH11P55287 AC023158.2-201ENST00000614876 543 ntBASIC4.02□□□□□ -1.77
CDH11P55287 RMST_9.1-201ENST00000619945 193 ntBASIC4.02□□□□□ -1.77
CDH11P55287 ZNF663P-202ENST00000641770 1131 ntBASIC4.02□□□□□ -1.77
CDH11P55287 ZNF876P-202ENST00000398732 1485 ntBASIC4.02□□□□□ -1.77
CDH11P55287 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CDH11P55287 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
CDH11P55287 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CDH11P55287 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.02□□□□□ -1.77
CDH11P55287 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDH11P55287 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CDH11P55287 USP9YP4-201ENST00000424401 1745 ntBASIC4.01□□□□□ -1.77
CDH11P55287 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.01□□□□□ -1.77
CDH11P55287 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CDH11P55287 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CDH11P55287 OR56B2P-202ENST00000641377 2453 ntBASIC4.01□□□□□ -1.77
CDH11P55287 CPHL1P-201ENST00000461341 3407 ntBASIC4.01□□□□□ -1.77
CDH11P55287 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
CDH11P55287 SNORD113-6-201ENST00000363345 75 ntBASIC4.01□□□□□ -1.77
CDH11P55287 RHOT1P2-201ENST00000366423 333 ntBASIC4.01□□□□□ -1.77
CDH11P55287 RNU6-413P-201ENST00000384115 107 ntBASIC4.01□□□□□ -1.77
CDH11P55287 AL603766.1-201ENST00000407763 664 ntBASIC4.01□□□□□ -1.77
CDH11P55287 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.01□□□□□ -1.77
CDH11P55287 RNA5SP104-201ENST00000410989 118 ntBASIC4.01□□□□□ -1.77
CDH11P55287 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.01□□□□□ -1.77
CDH11P55287 P2RY10P2-201ENST00000416730 913 ntBASIC4.01□□□□□ -1.77
CDH11P55287 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.01□□□□□ -1.77
CDH11P55287 RPS27AP7-201ENST00000422792 455 ntBASIC4.01□□□□□ -1.77
CDH11P55287 RPEP3-201ENST00000425462 676 ntBASIC4.01□□□□□ -1.77
CDH11P55287 RPS12P10-201ENST00000427031 377 ntBASIC4.01□□□□□ -1.77
CDH11P55287 MTCO1P3-201ENST00000429327 192 ntBASIC4.01□□□□□ -1.77
CDH11P55287 MTCO2P20-201ENST00000437339 673 ntBASIC4.01□□□□□ -1.77
CDH11P55287 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.01□□□□□ -1.77
CDH11P55287 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.01□□□□□ -1.77
CDH11P55287 AC104306.1-201ENST00000449702 371 ntBASIC4.01□□□□□ -1.77
CDH11P55287 AC079804.1-201ENST00000461922 436 ntBASIC4.01□□□□□ -1.77
CDH11P55287 AC126121.1-201ENST00000482313 553 ntBASIC4.01□□□□□ -1.77
CDH11P55287 RPS6P4-201ENST00000494693 758 ntBASIC4.01□□□□□ -1.77
CDH11P55287 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.01□□□□□ -1.77
CDH11P55287 AC083829.1-201ENST00000503756 657 ntBASIC4.01□□□□□ -1.77
CDH11P55287 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CDH11P55287 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.01□□□□□ -1.77
CDH11P55287 RNA5SP497-201ENST00000516081 97 ntBASIC4.01□□□□□ -1.77
CDH11P55287 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC4.01□□□□□ -1.77
CDH11P55287 HIGD1AP6-201ENST00000521833 279 ntBASIC4.01□□□□□ -1.77
CDH11P55287 AC090281.1-201ENST00000523019 276 ntBASIC4.01□□□□□ -1.77
CDH11P55287 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CDH11P55287 DUXAP6-201ENST00000553858 601 ntBASIC4.01□□□□□ -1.77
CDH11P55287 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.01□□□□□ -1.77
CDH11P55287 AC018552.3-201ENST00000567416 561 ntBASIC4.01□□□□□ -1.77
CDH11P55287 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC4.01□□□□□ -1.77
CDH11P55287 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.01□□□□□ -1.77
CDH11P55287 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.01□□□□□ -1.77
CDH11P55287 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.01□□□□□ -1.77
CDH11P55287 AP005019.3-201ENST00000620418 560 ntBASIC4.01□□□□□ -1.77
CDH11P55287 AC015908.5-201ENST00000623289 343 ntBASIC4.01□□□□□ -1.77
CDH11P55287 AC120349.3-201ENST00000624377 529 ntBASIC4.01□□□□□ -1.77
CDH11P55287 AP003072.4-201ENST00000624580 310 ntBASIC4.01□□□□□ -1.77
CDH11P55287 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.01□□□□□ -1.77
CDH11P55287 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CDH11P55287 AC090017.1-201ENST00000548612 1779 ntBASIC4.01□□□□□ -1.77
CDH11P55287 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
CDH11P55287 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CDH11P55287 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.01□□□□□ -1.77
CDH11P55287 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
CDH11P55287 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CDH11P55287 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
CDH11P55287 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.01□□□□□ -1.77
CDH11P55287 MFSD8-242ENST00000641690 4199 ntBASIC4□□□□□ -1.77
CDH11P55287 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CDH11P55287 AC139713.2-214ENST00000642059 1811 ntBASIC4□□□□□ -1.77
CDH11P55287 DCAF13P3-201ENST00000561147 1334 ntBASIC4□□□□□ -1.77
CDH11P55287 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
CDH11P55287 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
CDH11P55287 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4□□□□□ -1.77
CDH11P55287 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
CDH11P55287 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CDH11P55287 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
CDH11P55287 RNA5SP447-201ENST00000363749 119 ntBASIC4□□□□□ -1.77
CDH11P55287 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4□□□□□ -1.77
CDH11P55287 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4□□□□□ -1.77
CDH11P55287 RNU6-83P-201ENST00000384568 112 ntBASIC4□□□□□ -1.77
CDH11P55287 MIR93-201ENST00000385024 80 ntBASIC4□□□□□ -1.77
CDH11P55287 MIR513A2-201ENST00000385249 127 ntBASIC4□□□□□ -1.77
CDH11P55287 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4□□□□□ -1.77
CDH11P55287 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4□□□□□ -1.77
CDH11P55287 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
CDH11P55287 GSTA8P-201ENST00000404253 637 ntBASIC4□□□□□ -1.77
CDH11P55287 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4□□□□□ -1.77
CDH11P55287 RPS26P47-201ENST00000427219 348 ntBASIC4□□□□□ -1.77
CDH11P55287 AC092017.2-201ENST00000427600 362 ntBASIC4□□□□□ -1.77
CDH11P55287 MTCO1P54-201ENST00000430139 712 ntBASIC4□□□□□ -1.77
CDH11P55287 RPL7P34-201ENST00000433316 712 ntBASIC4□□□□□ -1.77
CDH11P55287 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4□□□□□ -1.77
CDH11P55287 Z77249.1-201ENST00000444622 1175 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms