Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CDH4P55283 AL049737.1-201ENST00000413920 1403 ntBASIC3.87□□□□□ -1.79
CDH4P55283 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.87□□□□□ -1.79
CDH4P55283 AC106871.1-201ENST00000568324 3102 ntBASIC3.87□□□□□ -1.79
CDH4P55283 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CDH4P55283 HSPA8P19-201ENST00000505359 1517 ntBASIC3.87□□□□□ -1.79
CDH4P55283 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.87□□□□□ -1.79
CDH4P55283 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CDH4P55283 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CDH4P55283 U8.11-201ENST00000384699 133 ntBASIC3.87□□□□□ -1.79
CDH4P55283 U8.12-201ENST00000384701 133 ntBASIC3.87□□□□□ -1.79
CDH4P55283 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.87□□□□□ -1.79
CDH4P55283 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.87□□□□□ -1.79
CDH4P55283 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.87□□□□□ -1.79
CDH4P55283 NPM1P34-201ENST00000428821 893 ntBASIC3.87□□□□□ -1.79
CDH4P55283 AL035246.1-201ENST00000433554 1255 ntBASIC3.87□□□□□ -1.79
CDH4P55283 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.87□□□□□ -1.79
CDH4P55283 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.87□□□□□ -1.79
CDH4P55283 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CDH4P55283 AC006480.1-201ENST00000449887 378 ntBASIC3.87□□□□□ -1.79
CDH4P55283 U8.18-201ENST00000459285 133 ntBASIC3.87□□□□□ -1.79
CDH4P55283 RN7SL542P-201ENST00000467147 294 ntBASIC3.87□□□□□ -1.79
CDH4P55283 RPS26P15-201ENST00000488067 348 ntBASIC3.87□□□□□ -1.79
CDH4P55283 AC069499.1-201ENST00000489433 509 ntBASIC3.87□□□□□ -1.79
CDH4P55283 AC012170.1-201ENST00000495139 359 ntBASIC3.87□□□□□ -1.79
CDH4P55283 AC023632.4-201ENST00000517783 191 ntBASIC3.87□□□□□ -1.79
CDH4P55283 SUMO2P20-201ENST00000520803 283 ntBASIC3.87□□□□□ -1.79
CDH4P55283 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.87□□□□□ -1.79
CDH4P55283 MED28P5-201ENST00000528254 438 ntBASIC3.87□□□□□ -1.79
CDH4P55283 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.87□□□□□ -1.79
CDH4P55283 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC3.87□□□□□ -1.79
CDH4P55283 AC092851.1-201ENST00000535964 478 ntBASIC3.87□□□□□ -1.79
CDH4P55283 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.87□□□□□ -1.79
CDH4P55283 AC244505.7-201ENST00000599675 272 ntBASIC3.87□□□□□ -1.79
CDH4P55283 AL390816.3-201ENST00000604527 1066 ntBASIC3.87□□□□□ -1.79
CDH4P55283 AL049634.3-201ENST00000604968 457 ntBASIC3.87□□□□□ -1.79
CDH4P55283 KATNBL1P1-201ENST00000605192 748 ntBASIC3.87□□□□□ -1.79
CDH4P55283 AC113194.1-201ENST00000606037 500 ntBASIC3.87□□□□□ -1.79
CDH4P55283 AC006946.3-201ENST00000609791 756 ntBASIC3.87□□□□□ -1.79
CDH4P55283 AC079684.1-201ENST00000621405 437 ntBASIC3.87□□□□□ -1.79
CDH4P55283 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CDH4P55283 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CDH4P55283 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.87□□□□□ -1.79
CDH4P55283 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CDH4P55283 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.87□□□□□ -1.79
CDH4P55283 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
CDH4P55283 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
CDH4P55283 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CDH4P55283 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CDH4P55283 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CDH4P55283 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CDH4P55283 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CDH4P55283 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CDH4P55283 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CDH4P55283 AC027287.1-201ENST00000553115 1453 ntBASIC3.86□□□□□ -1.79
CDH4P55283 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
CDH4P55283 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.86□□□□□ -1.79
CDH4P55283 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.86□□□□□ -1.79
CDH4P55283 MAPK10-372ENST00000641954 3413 ntBASIC3.86□□□□□ -1.79
CDH4P55283 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CDH4P55283 RNA5SP424-201ENST00000390988 115 ntBASIC3.86□□□□□ -1.79
CDH4P55283 XKRYP4-201ENST00000414395 483 ntBASIC3.86□□□□□ -1.79
CDH4P55283 HIGD1AP12-201ENST00000427832 281 ntBASIC3.86□□□□□ -1.79
CDH4P55283 RPL7P4-203ENST00000430239 730 ntBASIC3.86□□□□□ -1.79
CDH4P55283 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.86□□□□□ -1.79
CDH4P55283 ZNF965P-201ENST00000432501 817 ntBASIC3.86□□□□□ -1.79
CDH4P55283 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.86□□□□□ -1.79
CDH4P55283 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.86□□□□□ -1.79
CDH4P55283 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.86□□□□□ -1.79
CDH4P55283 XKRYP5-201ENST00000449659 483 ntBASIC3.86□□□□□ -1.79
CDH4P55283 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.86□□□□□ -1.79
CDH4P55283 UBDP1-202ENST00000457888 382 ntBASIC3.86□□□□□ -1.79
CDH4P55283 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.86□□□□□ -1.79
CDH4P55283 AC090071.1-201ENST00000507713 644 ntBASIC3.86□□□□□ -1.79
CDH4P55283 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.86□□□□□ -1.79
CDH4P55283 SAP18P1-201ENST00000512058 390 ntBASIC3.86□□□□□ -1.79
CDH4P55283 RNA5SP208-201ENST00000516156 78 ntBASIC3.86□□□□□ -1.79
CDH4P55283 COX6B1P6-201ENST00000522347 255 ntBASIC3.86□□□□□ -1.79
CDH4P55283 OR4C2P-201ENST00000530855 1064 ntBASIC3.86□□□□□ -1.79
CDH4P55283 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.86□□□□□ -1.79
CDH4P55283 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.86□□□□□ -1.79
CDH4P55283 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.86□□□□□ -1.79
CDH4P55283 AC018618.2-201ENST00000604770 446 ntBASIC3.86□□□□□ -1.79
CDH4P55283 AL392112.1-201ENST00000605115 829 ntBASIC3.86□□□□□ -1.79
CDH4P55283 AL359715.5-201ENST00000623431 443 ntBASIC3.86□□□□□ -1.79
CDH4P55283 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CDH4P55283 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CDH4P55283 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.86□□□□□ -1.79
CDH4P55283 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.86□□□□□ -1.79
CDH4P55283 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.86□□□□□ -1.79
CDH4P55283 AC022031.1-201ENST00000585985 2593 ntBASIC3.86□□□□□ -1.79
CDH4P55283 AC066616.2-201ENST00000559334 1481 ntBASIC3.86□□□□□ -1.79
CDH4P55283 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CDH4P55283 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.85□□□□□ -1.79
CDH4P55283 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CDH4P55283 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
CDH4P55283 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CDH4P55283 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CDH4P55283 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CDH4P55283 ZNF603P-201ENST00000405613 487 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms