Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AL593851.1-201ENST00000426171 157 ntBASIC4.93□□□□□ -1.62
COPAP53621 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.93□□□□□ -1.62
COPAP53621 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.93□□□□□ -1.62
COPAP53621 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
COPAP53621 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.93□□□□□ -1.62
COPAP53621 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.93□□□□□ -1.62
COPAP53621 ZNF736P5Y-201ENST00000451173 805 ntBASIC4.93□□□□□ -1.62
COPAP53621 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.93□□□□□ -1.62
COPAP53621 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.93□□□□□ -1.62
COPAP53621 AC010326.1-201ENST00000462726 602 ntBASIC4.93□□□□□ -1.62
COPAP53621 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
COPAP53621 RN7SL481P-201ENST00000477764 299 ntBASIC4.93□□□□□ -1.62
COPAP53621 ACTG1P13-201ENST00000486987 1043 ntBASIC4.93□□□□□ -1.62
COPAP53621 OR5BM1P-201ENST00000512021 366 ntBASIC4.93□□□□□ -1.62
COPAP53621 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
COPAP53621 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.93□□□□□ -1.62
COPAP53621 MTCO1P30-201ENST00000515244 580 ntBASIC4.93□□□□□ -1.62
COPAP53621 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.93□□□□□ -1.62
COPAP53621 AC105185.1-201ENST00000518705 535 ntBASIC4.93□□□□□ -1.62
COPAP53621 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.93□□□□□ -1.62
COPAP53621 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.93□□□□□ -1.62
COPAP53621 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.93□□□□□ -1.62
COPAP53621 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.93□□□□□ -1.62
COPAP53621 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC4.93□□□□□ -1.62
COPAP53621 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.93□□□□□ -1.62
COPAP53621 RN7SL690P-201ENST00000582087 240 ntBASIC4.93□□□□□ -1.62
COPAP53621 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.93□□□□□ -1.62
COPAP53621 AC110760.3-201ENST00000598794 467 ntBASIC4.93□□□□□ -1.62
COPAP53621 DUXAP11-201ENST00000603858 526 ntBASIC4.93□□□□□ -1.62
COPAP53621 AL358072.1-201ENST00000604156 575 ntBASIC4.93□□□□□ -1.62
COPAP53621 AC245008.1-201ENST00000608123 476 ntBASIC4.93□□□□□ -1.62
COPAP53621 AL049794.2-201ENST00000616301 365 ntBASIC4.93□□□□□ -1.62
COPAP53621 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.93□□□□□ -1.62
COPAP53621 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.93□□□□□ -1.62
COPAP53621 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.93□□□□□ -1.62
COPAP53621 AC139713.2-215ENST00000641428 5037 ntBASIC4.93□□□□□ -1.62
COPAP53621 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
COPAP53621 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.93□□□□□ -1.62
COPAP53621 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
COPAP53621 AC025125.1-201ENST00000624743 1922 ntBASIC4.93□□□□□ -1.62
COPAP53621 NCLP2-201ENST00000416078 1462 ntBASIC4.93□□□□□ -1.62
COPAP53621 ZNF542P-204ENST00000482727 1305 ntBASIC4.93□□□□□ -1.62
COPAP53621 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.93□□□□□ -1.62
COPAP53621 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
COPAP53621 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
COPAP53621 Z98755.1-201ENST00000407015 1384 ntBASIC4.92□□□□□ -1.62
COPAP53621 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.92□□□□□ -1.62
COPAP53621 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.92□□□□□ -1.62
COPAP53621 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
COPAP53621 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
COPAP53621 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
COPAP53621 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
COPAP53621 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
COPAP53621 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
COPAP53621 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
COPAP53621 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
COPAP53621 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.92□□□□□ -1.62
COPAP53621 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
COPAP53621 OR10J6P-201ENST00000289731 930 ntBASIC4.92□□□□□ -1.62
COPAP53621 OR56B2P-201ENST00000317102 954 ntBASIC4.92□□□□□ -1.62
COPAP53621 AC126755.2-208ENST00000327792 462 ntBASIC4.92□□□□□ -1.62
COPAP53621 AC138969.1-213ENST00000331436 462 ntBASIC4.92□□□□□ -1.62
COPAP53621 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.92□□□□□ -1.62
COPAP53621 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
COPAP53621 MIR708-201ENST00000390708 88 ntBASIC4.92□□□□□ -1.62
COPAP53621 MIR298-201ENST00000401212 88 ntBASIC4.92□□□□□ -1.62
COPAP53621 MTCO3P31-201ENST00000405526 789 ntBASIC4.92□□□□□ -1.62
COPAP53621 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.92□□□□□ -1.62
COPAP53621 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.92□□□□□ -1.62
COPAP53621 RNA5SP345-201ENST00000410646 108 ntBASIC4.92□□□□□ -1.62
COPAP53621 RN7SKP182-201ENST00000410772 298 ntBASIC4.92□□□□□ -1.62
COPAP53621 CKS1BP6-201ENST00000424932 240 ntBASIC4.92□□□□□ -1.62
COPAP53621 RPP40P1-201ENST00000426762 456 ntBASIC4.92□□□□□ -1.62
COPAP53621 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.92□□□□□ -1.62
COPAP53621 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC4.92□□□□□ -1.62
COPAP53621 UBE2D3P4-201ENST00000441973 436 ntBASIC4.92□□□□□ -1.62
COPAP53621 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
COPAP53621 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.92□□□□□ -1.62
COPAP53621 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.92□□□□□ -1.62
COPAP53621 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.92□□□□□ -1.62
COPAP53621 RN7SL354P-201ENST00000469282 294 ntBASIC4.92□□□□□ -1.62
COPAP53621 AC108751.2-201ENST00000469993 231 ntBASIC4.92□□□□□ -1.62
COPAP53621 RPL12P20-201ENST00000475538 479 ntBASIC4.92□□□□□ -1.62
COPAP53621 S100A11P1-201ENST00000477525 312 ntBASIC4.92□□□□□ -1.62
COPAP53621 NAA50-206ENST00000493454 964 ntTSL 2 BASIC4.92□□□□□ -1.62
COPAP53621 RPL30P11-201ENST00000495304 339 ntBASIC4.92□□□□□ -1.62
COPAP53621 SCARNA22-201ENST00000503991 125 ntBASIC4.92□□□□□ -1.62
COPAP53621 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.92□□□□□ -1.62
COPAP53621 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.92□□□□□ -1.62
COPAP53621 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
COPAP53621 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.92□□□□□ -1.62
COPAP53621 KRT19P6-201ENST00000510983 209 ntBASIC4.92□□□□□ -1.62
COPAP53621 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.92□□□□□ -1.62
COPAP53621 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.92□□□□□ -1.62
COPAP53621 SNORA48.10-201ENST00000516965 160 ntBASIC4.92□□□□□ -1.62
COPAP53621 RNU6-232P-201ENST00000517144 64 ntBASIC4.92□□□□□ -1.62
COPAP53621 SOD1P3-201ENST00000518682 454 ntBASIC4.92□□□□□ -1.62
COPAP53621 OR5M2P-201ENST00000529003 936 ntBASIC4.92□□□□□ -1.62
COPAP53621 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.92□□□□□ -1.62
COPAP53621 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms