Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.41□□□□□ -1.86
GTF2A1P52655 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.41□□□□□ -1.86
GTF2A1P52655 AC091516.1-201ENST00000549191 703 ntBASIC3.41□□□□□ -1.86
GTF2A1P52655 AC011477.5-201ENST00000586571 259 ntBASIC3.41□□□□□ -1.86
GTF2A1P52655 AC006116.5-201ENST00000591936 559 ntBASIC3.41□□□□□ -1.86
GTF2A1P52655 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC3.41□□□□□ -1.86
GTF2A1P52655 SNX6P1-201ENST00000601728 1224 ntBASIC3.41□□□□□ -1.86
GTF2A1P52655 U1.23-201ENST00000610293 146 ntBASIC3.41□□□□□ -1.86
GTF2A1P52655 AC114781.5-201ENST00000615297 108 ntBASIC3.41□□□□□ -1.86
GTF2A1P52655 RNU1-68P-201ENST00000615382 146 ntBASIC3.41□□□□□ -1.86
GTF2A1P52655 U1.39-201ENST00000621562 146 ntBASIC3.41□□□□□ -1.86
GTF2A1P52655 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.41□□□□□ -1.86
GTF2A1P52655 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
GTF2A1P52655 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.4□□□□□ -1.86
GTF2A1P52655 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
GTF2A1P52655 RNA5SP509-201ENST00000364577 119 ntBASIC3.4□□□□□ -1.87
GTF2A1P52655 U3.22-201ENST00000391120 215 ntBASIC3.4□□□□□ -1.87
GTF2A1P52655 AC109583.1-201ENST00000432156 268 ntBASIC3.4□□□□□ -1.87
GTF2A1P52655 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.4□□□□□ -1.87
GTF2A1P52655 HNRNPDLP3-201ENST00000456745 380 ntBASIC3.4□□□□□ -1.87
GTF2A1P52655 OR6K1P-201ENST00000456766 971 ntBASIC3.4□□□□□ -1.87
GTF2A1P52655 RN7SL303P-201ENST00000469773 251 ntBASIC3.4□□□□□ -1.87
GTF2A1P52655 AC068724.1-201ENST00000487100 792 ntBASIC3.4□□□□□ -1.87
GTF2A1P52655 AL132838.2-201ENST00000492041 314 ntBASIC3.4□□□□□ -1.87
GTF2A1P52655 APOOP4-201ENST00000513530 597 ntBASIC3.4□□□□□ -1.87
GTF2A1P52655 RNA5SP217-201ENST00000515959 91 ntBASIC3.4□□□□□ -1.87
GTF2A1P52655 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.4□□□□□ -1.87
GTF2A1P52655 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.4□□□□□ -1.87
GTF2A1P52655 OR4A12P-201ENST00000530847 918 ntBASIC3.4□□□□□ -1.87
GTF2A1P52655 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.4□□□□□ -1.87
GTF2A1P52655 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.4□□□□□ -1.87
GTF2A1P52655 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC3.4□□□□□ -1.87
GTF2A1P52655 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.4□□□□□ -1.87
GTF2A1P52655 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
GTF2A1P52655 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.4□□□□□ -1.87
GTF2A1P52655 AC011944.2-201ENST00000624440 683 ntBASIC3.4□□□□□ -1.87
GTF2A1P52655 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
GTF2A1P52655 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
GTF2A1P52655 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.4□□□□□ -1.87
GTF2A1P52655 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.39□□□□□ -1.87
GTF2A1P52655 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
GTF2A1P52655 RNU4-39P-201ENST00000362455 127 ntBASIC3.39□□□□□ -1.87
GTF2A1P52655 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.39□□□□□ -1.87
GTF2A1P52655 RNU6-225P-201ENST00000384613 103 ntBASIC3.39□□□□□ -1.87
GTF2A1P52655 RN7SKP33-201ENST00000410942 340 ntBASIC3.39□□□□□ -1.87
GTF2A1P52655 RPL32P35-201ENST00000415214 394 ntBASIC3.39□□□□□ -1.87
GTF2A1P52655 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.39□□□□□ -1.87
GTF2A1P52655 AL691447.1-201ENST00000419456 387 ntBASIC3.39□□□□□ -1.87
GTF2A1P52655 AC007394.1-201ENST00000421941 531 ntBASIC3.39□□□□□ -1.87
GTF2A1P52655 RPS27AP7-201ENST00000422792 455 ntBASIC3.39□□□□□ -1.87
GTF2A1P52655 AL357552.1-201ENST00000445254 415 ntBASIC3.39□□□□□ -1.87
GTF2A1P52655 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.39□□□□□ -1.87
GTF2A1P52655 UQCRHP3-201ENST00000451503 251 ntBASIC3.39□□□□□ -1.87
GTF2A1P52655 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.39□□□□□ -1.87
GTF2A1P52655 snoU13.1-201ENST00000459157 104 ntBASIC3.39□□□□□ -1.87
GTF2A1P52655 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC3.39□□□□□ -1.87
GTF2A1P52655 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.39□□□□□ -1.87
GTF2A1P52655 RPL21P103-201ENST00000479921 488 ntBASIC3.39□□□□□ -1.87
GTF2A1P52655 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.39□□□□□ -1.87
GTF2A1P52655 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.39□□□□□ -1.87
GTF2A1P52655 AC091167.1-201ENST00000492017 396 ntBASIC3.39□□□□□ -1.87
GTF2A1P52655 RPS27AP13-201ENST00000498403 237 ntBASIC3.39□□□□□ -1.87
GTF2A1P52655 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
GTF2A1P52655 RNU6-56P-201ENST00000516986 93 ntBASIC3.39□□□□□ -1.87
GTF2A1P52655 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.39□□□□□ -1.87
GTF2A1P52655 YPEL5P3-201ENST00000547227 352 ntBASIC3.39□□□□□ -1.87
GTF2A1P52655 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.39□□□□□ -1.87
GTF2A1P52655 AC063949.1-201ENST00000552900 865 ntBASIC3.39□□□□□ -1.87
GTF2A1P52655 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.39□□□□□ -1.87
GTF2A1P52655 MTCO3P13-201ENST00000577757 781 ntBASIC3.39□□□□□ -1.87
GTF2A1P52655 RN7SL600P-201ENST00000581811 299 ntBASIC3.39□□□□□ -1.87
GTF2A1P52655 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.39□□□□□ -1.87
GTF2A1P52655 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.39□□□□□ -1.87
GTF2A1P52655 LLPHP1-201ENST00000603571 367 ntBASIC3.39□□□□□ -1.87
GTF2A1P52655 AC024940.4-201ENST00000605507 246 ntBASIC3.39□□□□□ -1.87
GTF2A1P52655 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.39□□□□□ -1.87
GTF2A1P52655 AL121890.3-201ENST00000618494 516 ntBASIC3.39□□□□□ -1.87
GTF2A1P52655 AC010608.2-201ENST00000624830 470 ntBASIC3.39□□□□□ -1.87
GTF2A1P52655 MIR3653-201ENST00000625572 110 ntBASIC3.39□□□□□ -1.87
GTF2A1P52655 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.39□□□□□ -1.87
GTF2A1P52655 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
GTF2A1P52655 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.39□□□□□ -1.87
GTF2A1P52655 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.38□□□□□ -1.87
GTF2A1P52655 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
GTF2A1P52655 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.38□□□□□ -1.87
GTF2A1P52655 AL157700.1-201ENST00000561973 1432 ntBASIC3.38□□□□□ -1.87
GTF2A1P52655 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.38□□□□□ -1.87
GTF2A1P52655 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.38□□□□□ -1.87
GTF2A1P52655 RPS27AP11-201ENST00000402798 447 ntBASIC3.38□□□□□ -1.87
GTF2A1P52655 RN7SKP53-201ENST00000411337 315 ntBASIC3.38□□□□□ -1.87
GTF2A1P52655 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC3.38□□□□□ -1.87
GTF2A1P52655 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.38□□□□□ -1.87
GTF2A1P52655 RPL23AP38-201ENST00000423801 469 ntBASIC3.38□□□□□ -1.87
GTF2A1P52655 OR2AS1P-201ENST00000427827 319 ntBASIC3.38□□□□□ -1.87
GTF2A1P52655 CNOT7P1-201ENST00000429006 852 ntBASIC3.38□□□□□ -1.87
GTF2A1P52655 AL356276.2-201ENST00000435919 558 ntBASIC3.38□□□□□ -1.87
GTF2A1P52655 HMGB3P11-201ENST00000440127 604 ntBASIC3.38□□□□□ -1.87
GTF2A1P52655 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.38□□□□□ -1.87
GTF2A1P52655 NPM1P49-201ENST00000448027 714 ntBASIC3.38□□□□□ -1.87
GTF2A1P52655 PPIAP3-201ENST00000450588 505 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms