Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CASP4P49662 AC027287.1-201ENST00000553115 1453 ntBASIC3.98□□□□□ -1.77
CASP4P49662 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CASP4P49662 MAPK10-372ENST00000641954 3413 ntBASIC3.98□□□□□ -1.77
CASP4P49662 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.98□□□□□ -1.77
CASP4P49662 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CASP4P49662 SNORD51.1-201ENST00000365405 77 ntBASIC3.98□□□□□ -1.77
CASP4P49662 RNU1-64P-201ENST00000365443 163 ntBASIC3.98□□□□□ -1.77
CASP4P49662 MIR134-201ENST00000385258 73 ntBASIC3.98□□□□□ -1.77
CASP4P49662 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC3.98□□□□□ -1.77
CASP4P49662 RPL36AP36-201ENST00000418616 301 ntBASIC3.98□□□□□ -1.77
CASP4P49662 RPL7P53-201ENST00000421245 739 ntBASIC3.98□□□□□ -1.77
CASP4P49662 RPL30P3-201ENST00000424262 333 ntBASIC3.98□□□□□ -1.77
CASP4P49662 AL035458.1-201ENST00000433096 585 ntBASIC3.98□□□□□ -1.77
CASP4P49662 AC122718.1-201ENST00000439448 744 ntBASIC3.98□□□□□ -1.77
CASP4P49662 XKRY2-201ENST00000442362 1093 ntBASIC3.98□□□□□ -1.77
CASP4P49662 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.98□□□□□ -1.77
CASP4P49662 SNRPGP5-201ENST00000456003 220 ntBASIC3.98□□□□□ -1.77
CASP4P49662 FAM133DP-201ENST00000464802 691 ntBASIC3.98□□□□□ -1.77
CASP4P49662 RN7SL542P-201ENST00000467147 294 ntBASIC3.98□□□□□ -1.77
CASP4P49662 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.98□□□□□ -1.77
CASP4P49662 RNU1-45P-201ENST00000517191 141 ntBASIC3.98□□□□□ -1.77
CASP4P49662 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.98□□□□□ -1.77
CASP4P49662 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.98□□□□□ -1.77
CASP4P49662 AC026616.1-201ENST00000523157 525 ntBASIC3.98□□□□□ -1.77
CASP4P49662 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CASP4P49662 OR5AP1P-201ENST00000529730 940 ntBASIC3.98□□□□□ -1.77
CASP4P49662 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC3.98□□□□□ -1.77
CASP4P49662 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.98□□□□□ -1.77
CASP4P49662 POLR2KP1-201ENST00000553226 168 ntBASIC3.98□□□□□ -1.77
CASP4P49662 BNIP3P5-201ENST00000562290 498 ntBASIC3.98□□□□□ -1.77
CASP4P49662 AC006130.2-201ENST00000586202 326 ntBASIC3.98□□□□□ -1.77
CASP4P49662 AC083899.3-201ENST00000603413 594 ntBASIC3.98□□□□□ -1.77
CASP4P49662 AL049634.3-201ENST00000604968 457 ntBASIC3.98□□□□□ -1.77
CASP4P49662 AC012467.1-201ENST00000607740 256 ntBASIC3.98□□□□□ -1.77
CASP4P49662 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CASP4P49662 U6.48-201ENST00000618523 106 ntBASIC3.98□□□□□ -1.77
CASP4P49662 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CASP4P49662 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CASP4P49662 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CASP4P49662 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CASP4P49662 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.97□□□□□ -1.77
CASP4P49662 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.97□□□□□ -1.77
CASP4P49662 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CASP4P49662 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.97□□□□□ -1.77
CASP4P49662 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
CASP4P49662 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CASP4P49662 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.97□□□□□ -1.77
CASP4P49662 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.97□□□□□ -1.77
CASP4P49662 RNA5SP42-201ENST00000364278 115 ntBASIC3.97□□□□□ -1.77
CASP4P49662 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CASP4P49662 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.97□□□□□ -1.77
CASP4P49662 HMGB1P10-201ENST00000395823 563 ntBASIC3.97□□□□□ -1.77
CASP4P49662 HMGB1P13-201ENST00000406019 642 ntBASIC3.97□□□□□ -1.77
CASP4P49662 MTHFD2P2-201ENST00000407725 247 ntBASIC3.97□□□□□ -1.77
CASP4P49662 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.97□□□□□ -1.77
CASP4P49662 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.97□□□□□ -1.77
CASP4P49662 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.97□□□□□ -1.77
CASP4P49662 RPL17P36-201ENST00000420302 549 ntBASIC3.97□□□□□ -1.77
CASP4P49662 MTND4P24-201ENST00000424002 397 ntBASIC3.97□□□□□ -1.77
CASP4P49662 SDCBPP2-201ENST00000424643 885 ntBASIC3.97□□□□□ -1.77
CASP4P49662 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.97□□□□□ -1.77
CASP4P49662 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CASP4P49662 FO393419.3-201ENST00000428741 282 ntBASIC3.97□□□□□ -1.77
CASP4P49662 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.97□□□□□ -1.77
CASP4P49662 AL353093.1-201ENST00000441292 436 ntBASIC3.97□□□□□ -1.77
CASP4P49662 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CASP4P49662 AC099563.1-201ENST00000456086 418 ntBASIC3.97□□□□□ -1.77
CASP4P49662 ACTR3P3-201ENST00000480448 893 ntBASIC3.97□□□□□ -1.77
CASP4P49662 AC011037.1-201ENST00000483964 558 ntBASIC3.97□□□□□ -1.77
CASP4P49662 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
CASP4P49662 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC3.97□□□□□ -1.77
CASP4P49662 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.97□□□□□ -1.77
CASP4P49662 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.97□□□□□ -1.77
CASP4P49662 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.97□□□□□ -1.77
CASP4P49662 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CASP4P49662 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.97□□□□□ -1.77
CASP4P49662 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
CASP4P49662 OR4A2P-201ENST00000527276 913 ntBASIC3.97□□□□□ -1.77
CASP4P49662 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.97□□□□□ -1.77
CASP4P49662 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.97□□□□□ -1.77
CASP4P49662 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.97□□□□□ -1.77
CASP4P49662 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.97□□□□□ -1.77
CASP4P49662 MTND4LP24-201ENST00000572277 291 ntBASIC3.97□□□□□ -1.77
CASP4P49662 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.97□□□□□ -1.77
CASP4P49662 AC025016.1-201ENST00000616746 682 ntBASIC3.97□□□□□ -1.77
CASP4P49662 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CASP4P49662 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.97□□□□□ -1.77
CASP4P49662 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
CASP4P49662 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.97□□□□□ -1.77
CASP4P49662 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.96□□□□□ -1.77
CASP4P49662 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CASP4P49662 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CASP4P49662 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
CASP4P49662 RN7SKP202-201ENST00000410439 330 ntBASIC3.96□□□□□ -1.78
CASP4P49662 AC010385.1-201ENST00000412374 256 ntBASIC3.96□□□□□ -1.78
CASP4P49662 AC114814.2-201ENST00000419195 485 ntBASIC3.96□□□□□ -1.78
CASP4P49662 AC092017.2-201ENST00000427600 362 ntBASIC3.96□□□□□ -1.78
CASP4P49662 AC074367.1-201ENST00000438685 1125 ntBASIC3.96□□□□□ -1.78
CASP4P49662 RRM2P4-201ENST00000441721 562 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms