Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC093535.2-201ENST00000624769 2326 ntBASIC4.26□□□□□ -1.73
LHX1P48742 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.26□□□□□ -1.73
LHX1P48742 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
LHX1P48742 AL512646.1-201ENST00000269395 1077 ntBASIC4.26□□□□□ -1.73
LHX1P48742 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LHX1P48742 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LHX1P48742 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
LHX1P48742 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.26□□□□□ -1.73
LHX1P48742 Y_RNA.126-201ENST00000363382 111 ntBASIC4.26□□□□□ -1.73
LHX1P48742 RNU6-236P-201ENST00000363886 106 ntBASIC4.26□□□□□ -1.73
LHX1P48742 RNU1-64P-201ENST00000365443 163 ntBASIC4.26□□□□□ -1.73
LHX1P48742 VN1R51P-201ENST00000411675 945 ntBASIC4.26□□□□□ -1.73
LHX1P48742 MTND2P9-201ENST00000422293 931 ntBASIC4.26□□□□□ -1.73
LHX1P48742 MTCYBP15-201ENST00000433123 1127 ntBASIC4.26□□□□□ -1.73
LHX1P48742 AC234064.1-201ENST00000436312 247 ntBASIC4.26□□□□□ -1.73
LHX1P48742 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.26□□□□□ -1.73
LHX1P48742 snoU109.3-201ENST00000459477 145 ntBASIC4.26□□□□□ -1.73
LHX1P48742 AC096992.1-201ENST00000459808 709 ntBASIC4.26□□□□□ -1.73
LHX1P48742 AC015724.1-201ENST00000478577 156 ntBASIC4.26□□□□□ -1.73
LHX1P48742 VN1R105P-201ENST00000486595 910 ntBASIC4.26□□□□□ -1.73
LHX1P48742 AC091860.1-201ENST00000505723 432 ntBASIC4.26□□□□□ -1.73
LHX1P48742 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.26□□□□□ -1.73
LHX1P48742 RNU6-276P-201ENST00000516114 96 ntBASIC4.26□□□□□ -1.73
LHX1P48742 RN7SKP157-201ENST00000516174 282 ntBASIC4.26□□□□□ -1.73
LHX1P48742 RNU6-416P-201ENST00000516265 103 ntBASIC4.26□□□□□ -1.73
LHX1P48742 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC4.26□□□□□ -1.73
LHX1P48742 AC104417.1-201ENST00000523974 751 ntBASIC4.26□□□□□ -1.73
LHX1P48742 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.26□□□□□ -1.73
LHX1P48742 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.26□□□□□ -1.73
LHX1P48742 ZKSCAN7P1-201ENST00000543668 673 ntBASIC4.26□□□□□ -1.73
LHX1P48742 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
LHX1P48742 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC4.26□□□□□ -1.73
LHX1P48742 NIFKP8-201ENST00000560500 874 ntBASIC4.26□□□□□ -1.73
LHX1P48742 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.26□□□□□ -1.73
LHX1P48742 AC007599.1-201ENST00000568688 1174 ntBASIC4.26□□□□□ -1.73
LHX1P48742 AC120057.2-201ENST00000571520 271 ntBASIC4.26□□□□□ -1.73
LHX1P48742 AC005255.1-201ENST00000593748 216 ntBASIC4.26□□□□□ -1.73
LHX1P48742 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.26□□□□□ -1.73
LHX1P48742 AC069431.2-201ENST00000604149 1099 ntBASIC4.26□□□□□ -1.73
LHX1P48742 AL592436.1-201ENST00000605135 558 ntBASIC4.26□□□□□ -1.73
LHX1P48742 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
LHX1P48742 AC016597.2-201ENST00000613256 341 ntBASIC4.26□□□□□ -1.73
LHX1P48742 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LHX1P48742 AC009237.17-201ENST00000618111 748 ntBASIC4.26□□□□□ -1.73
LHX1P48742 AL139089.1-201ENST00000620372 975 ntBASIC4.26□□□□□ -1.73
LHX1P48742 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.26□□□□□ -1.73
LHX1P48742 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.26□□□□□ -1.73
LHX1P48742 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
LHX1P48742 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.26□□□□□ -1.73
LHX1P48742 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.26□□□□□ -1.73
LHX1P48742 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LHX1P48742 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
LHX1P48742 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LHX1P48742 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.26□□□□□ -1.73
LHX1P48742 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
LHX1P48742 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
LHX1P48742 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.25□□□□□ -1.73
LHX1P48742 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LHX1P48742 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.25□□□□□ -1.73
LHX1P48742 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LHX1P48742 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
LHX1P48742 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.25□□□□□ -1.73
LHX1P48742 RNU5E-10P-201ENST00000363506 118 ntBASIC4.25□□□□□ -1.73
LHX1P48742 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
LHX1P48742 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LHX1P48742 AL445189.1-201ENST00000405722 338 ntBASIC4.25□□□□□ -1.73
LHX1P48742 SNORA3C-201ENST00000408792 125 ntBASIC4.25□□□□□ -1.73
LHX1P48742 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.25□□□□□ -1.73
LHX1P48742 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.25□□□□□ -1.73
LHX1P48742 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC4.25□□□□□ -1.73
LHX1P48742 USP9YP21-201ENST00000420603 432 ntBASIC4.25□□□□□ -1.73
LHX1P48742 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.25□□□□□ -1.73
LHX1P48742 AL009174.1-201ENST00000426577 416 ntBASIC4.25□□□□□ -1.73
LHX1P48742 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC4.25□□□□□ -1.73
LHX1P48742 HIGD1AP4-201ENST00000430194 280 ntBASIC4.25□□□□□ -1.73
LHX1P48742 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.25□□□□□ -1.73
LHX1P48742 TBCAP1-201ENST00000436520 327 ntBASIC4.25□□□□□ -1.73
LHX1P48742 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.25□□□□□ -1.73
LHX1P48742 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.25□□□□□ -1.73
LHX1P48742 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC4.25□□□□□ -1.73
LHX1P48742 AC104689.1-201ENST00000473356 768 ntBASIC4.25□□□□□ -1.73
LHX1P48742 AC020898.1-201ENST00000474167 787 ntBASIC4.25□□□□□ -1.73
LHX1P48742 RPS3AP6-201ENST00000484430 795 ntBASIC4.25□□□□□ -1.73
LHX1P48742 AC008837.1-201ENST00000511513 412 ntBASIC4.25□□□□□ -1.73
LHX1P48742 RPL7L1P13-201ENST00000511702 739 ntBASIC4.25□□□□□ -1.73
LHX1P48742 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.25□□□□□ -1.73
LHX1P48742 AC026402.1-201ENST00000513642 170 ntBASIC4.25□□□□□ -1.73
LHX1P48742 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.25□□□□□ -1.73
LHX1P48742 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.25□□□□□ -1.73
LHX1P48742 SNORA19.3-201ENST00000516165 130 ntBASIC4.25□□□□□ -1.73
LHX1P48742 RNU6-1028P-201ENST00000517164 93 ntBASIC4.25□□□□□ -1.73
LHX1P48742 IGKV2-38-201ENST00000517443 247 ntBASIC4.25□□□□□ -1.73
LHX1P48742 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.25□□□□□ -1.73
LHX1P48742 AC087897.1-201ENST00000550134 156 ntBASIC4.25□□□□□ -1.73
LHX1P48742 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LHX1P48742 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.25□□□□□ -1.73
LHX1P48742 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.25□□□□□ -1.73
LHX1P48742 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.25□□□□□ -1.73
LHX1P48742 BNIP3P40-201ENST00000596017 556 ntBASIC4.25□□□□□ -1.73
LHX1P48742 AC069304.3-201ENST00000603938 1084 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms