Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SCN4AP35499 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.09□□□□□ -1.76
SCN4AP35499 HLFP1-201ENST00000402375 499 ntBASIC4.09□□□□□ -1.76
SCN4AP35499 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.09□□□□□ -1.76
SCN4AP35499 DNAJC19P8-201ENST00000452887 259 ntBASIC4.09□□□□□ -1.76
SCN4AP35499 AC135001.1-201ENST00000544546 283 ntBASIC4.09□□□□□ -1.76
SCN4AP35499 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.09□□□□□ -1.76
SCN4AP35499 AC007998.5-201ENST00000622938 237 ntBASIC4.09□□□□□ -1.76
SCN4AP35499 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SCN4AP35499 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
SCN4AP35499 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
SCN4AP35499 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SCN4AP35499 SAGE2P-201ENST00000420011 2126 ntBASIC4.08□□□□□ -1.76
SCN4AP35499 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.08□□□□□ -1.76
SCN4AP35499 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
SCN4AP35499 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SCN4AP35499 HSPA8P17-201ENST00000427029 1382 ntBASIC4.08□□□□□ -1.76
SCN4AP35499 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SCN4AP35499 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SCN4AP35499 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SCN4AP35499 RPL35AP12-201ENST00000425362 338 ntBASIC4.08□□□□□ -1.76
SCN4AP35499 IFNNP1-201ENST00000429219 553 ntBASIC4.08□□□□□ -1.76
SCN4AP35499 AL133477.1-201ENST00000457472 514 ntBASIC4.08□□□□□ -1.76
SCN4AP35499 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.08□□□□□ -1.76
SCN4AP35499 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.08□□□□□ -1.76
SCN4AP35499 RPL7L1P13-201ENST00000511702 739 ntBASIC4.08□□□□□ -1.76
SCN4AP35499 AC005476.1-201ENST00000554427 397 ntBASIC4.08□□□□□ -1.76
SCN4AP35499 SULT1C2P2-201ENST00000562517 294 ntBASIC4.08□□□□□ -1.76
SCN4AP35499 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.08□□□□□ -1.76
SCN4AP35499 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.08□□□□□ -1.76
SCN4AP35499 AC015802.5-201ENST00000607478 399 ntBASIC4.08□□□□□ -1.76
SCN4AP35499 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.08□□□□□ -1.76
SCN4AP35499 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SCN4AP35499 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SCN4AP35499 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
SCN4AP35499 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SCN4AP35499 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SCN4AP35499 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.07□□□□□ -1.76
SCN4AP35499 RPS20P1-201ENST00000434853 354 ntBASIC4.07□□□□□ -1.76
SCN4AP35499 RN7SL863P-201ENST00000462370 296 ntBASIC4.07□□□□□ -1.76
SCN4AP35499 RPS3AP43-201ENST00000479743 781 ntBASIC4.07□□□□□ -1.76
SCN4AP35499 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.07□□□□□ -1.76
SCN4AP35499 AL121766.1-201ENST00000547436 487 ntBASIC4.07□□□□□ -1.76
SCN4AP35499 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC4.07□□□□□ -1.76
SCN4AP35499 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.07□□□□□ -1.76
SCN4AP35499 RNVU1-4-201ENST00000612985 164 ntBASIC4.07□□□□□ -1.76
SCN4AP35499 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.07□□□□□ -1.76
SCN4AP35499 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.07□□□□□ -1.76
SCN4AP35499 AC116096.1-201ENST00000566804 2314 ntBASIC4.07□□□□□ -1.76
SCN4AP35499 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SCN4AP35499 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SCN4AP35499 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SCN4AP35499 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.07□□□□□ -1.76
SCN4AP35499 AC026523.2-201ENST00000625039 7739 ntBASIC4.07□□□□□ -1.76
SCN4AP35499 MIR422A-201ENST00000362286 90 ntBASIC4.07□□□□□ -1.76
SCN4AP35499 RHEBP3-201ENST00000411920 351 ntBASIC4.07□□□□□ -1.76
SCN4AP35499 SMC4P1-201ENST00000414479 527 ntBASIC4.07□□□□□ -1.76
SCN4AP35499 AC096638.2-201ENST00000434965 711 ntBASIC4.07□□□□□ -1.76
SCN4AP35499 AL356535.1-201ENST00000440335 398 ntBASIC4.07□□□□□ -1.76
SCN4AP35499 AC009263.1-201ENST00000441193 1239 ntBASIC4.07□□□□□ -1.76
SCN4AP35499 RPS29P31-201ENST00000446147 164 ntBASIC4.07□□□□□ -1.76
SCN4AP35499 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.07□□□□□ -1.76
SCN4AP35499 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
SCN4AP35499 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SCN4AP35499 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.07□□□□□ -1.76
SCN4AP35499 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.07□□□□□ -1.76
SCN4AP35499 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
SCN4AP35499 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.06□□□□□ -1.76
SCN4AP35499 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
SCN4AP35499 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SCN4AP35499 OOSP1P1-201ENST00000423265 274 ntBASIC4.06□□□□□ -1.76
SCN4AP35499 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.06□□□□□ -1.76
SCN4AP35499 RPL7P59-201ENST00000447700 943 ntBASIC4.06□□□□□ -1.76
SCN4AP35499 RN7SKP209-201ENST00000516888 304 ntBASIC4.06□□□□□ -1.76
SCN4AP35499 HIGD1AP1-201ENST00000550979 275 ntBASIC4.06□□□□□ -1.76
SCN4AP35499 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC4.06□□□□□ -1.76
SCN4AP35499 AC091905.1-201ENST00000624400 311 ntBASIC4.06□□□□□ -1.76
SCN4AP35499 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
SCN4AP35499 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.06□□□□□ -1.76
SCN4AP35499 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.06□□□□□ -1.76
SCN4AP35499 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SCN4AP35499 AC062016.1-201ENST00000355719 319 ntBASIC4.05□□□□□ -1.76
SCN4AP35499 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SCN4AP35499 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.05□□□□□ -1.76
SCN4AP35499 SETP5-201ENST00000437270 562 ntBASIC4.05□□□□□ -1.76
SCN4AP35499 AC092809.1-201ENST00000441469 474 ntBASIC4.05□□□□□ -1.76
SCN4AP35499 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.05□□□□□ -1.76
SCN4AP35499 RPL7P48-201ENST00000461513 746 ntBASIC4.05□□□□□ -1.76
SCN4AP35499 AC112198.1-201ENST00000505369 1220 ntBASIC4.05□□□□□ -1.76
SCN4AP35499 VWA8P1-201ENST00000510889 176 ntBASIC4.05□□□□□ -1.76
SCN4AP35499 APOOP4-201ENST00000513530 597 ntBASIC4.05□□□□□ -1.76
SCN4AP35499 NARSP2-201ENST00000518524 679 ntBASIC4.05□□□□□ -1.76
SCN4AP35499 PSMA2P1-201ENST00000526365 646 ntBASIC4.05□□□□□ -1.76
SCN4AP35499 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.05□□□□□ -1.76
SCN4AP35499 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.05□□□□□ -1.76
SCN4AP35499 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.05□□□□□ -1.76
SCN4AP35499 KLKP1-201ENST00000595979 403 ntBASIC4.05□□□□□ -1.76
SCN4AP35499 AC020914.4-201ENST00000597690 277 ntBASIC4.05□□□□□ -1.76
SCN4AP35499 RPL12P50-201ENST00000603116 116 ntBASIC4.05□□□□□ -1.76
SCN4AP35499 AC136601.2-201ENST00000604356 474 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms