Protein–RNA interactions for Protein: P28358

HOXD10, Homeobox protein Hox-D10, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD10P28358 RN7SKP13-201ENST00000515933 244 ntBASIC4.36□□□□□ -1.71
HOXD10P28358 RNU1-103P-201ENST00000516502 125 ntBASIC4.36□□□□□ -1.71
HOXD10P28358 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.36□□□□□ -1.71
HOXD10P28358 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.36□□□□□ -1.71
HOXD10P28358 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.36□□□□□ -1.71
HOXD10P28358 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.36□□□□□ -1.71
HOXD10P28358 NCAPGP2-201ENST00000557911 754 ntBASIC4.36□□□□□ -1.71
HOXD10P28358 AL109741.3-201ENST00000561748 592 ntBASIC4.36□□□□□ -1.71
HOXD10P28358 AC022968.1-201ENST00000567372 442 ntBASIC4.36□□□□□ -1.71
HOXD10P28358 AC079171.1-201ENST00000568788 914 ntBASIC4.36□□□□□ -1.71
HOXD10P28358 AC022884.3-201ENST00000579571 248 ntBASIC4.36□□□□□ -1.71
HOXD10P28358 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.36□□□□□ -1.71
HOXD10P28358 AC022387.2-201ENST00000604050 448 ntBASIC4.36□□□□□ -1.71
HOXD10P28358 AC138907.10-201ENST00000623708 983 ntBASIC4.36□□□□□ -1.71
HOXD10P28358 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.36□□□□□ -1.71
HOXD10P28358 OR5AC4P-202ENST00000642086 985 ntBASIC4.36□□□□□ -1.71
HOXD10P28358 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
HOXD10P28358 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HOXD10P28358 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
HOXD10P28358 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.36□□□□□ -1.71
HOXD10P28358 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HOXD10P28358 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
HOXD10P28358 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
HOXD10P28358 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HOXD10P28358 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.35□□□□□ -1.71
HOXD10P28358 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HOXD10P28358 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HOXD10P28358 SNORD65-201ENST00000391079 73 ntBASIC4.35□□□□□ -1.71
HOXD10P28358 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HOXD10P28358 PRELID3BP11-201ENST00000414230 479 ntBASIC4.35□□□□□ -1.71
HOXD10P28358 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXD10P28358 AL133477.1-201ENST00000457472 514 ntBASIC4.35□□□□□ -1.71
HOXD10P28358 AP000873.1-201ENST00000463987 400 ntBASIC4.35□□□□□ -1.71
HOXD10P28358 AL136126.1-201ENST00000473603 402 ntBASIC4.35□□□□□ -1.71
HOXD10P28358 HMGB1P21-201ENST00000502313 581 ntBASIC4.35□□□□□ -1.71
HOXD10P28358 HIGD1AP18-201ENST00000520730 278 ntBASIC4.35□□□□□ -1.71
HOXD10P28358 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.35□□□□□ -1.71
HOXD10P28358 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXD10P28358 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
HOXD10P28358 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXD10P28358 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXD10P28358 AC069240.1-201ENST00000548774 375 ntBASIC4.35□□□□□ -1.71
HOXD10P28358 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.35□□□□□ -1.71
HOXD10P28358 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXD10P28358 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXD10P28358 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXD10P28358 AC244505.7-201ENST00000599675 272 ntBASIC4.35□□□□□ -1.71
HOXD10P28358 AL354760.1-201ENST00000608357 643 ntBASIC4.35□□□□□ -1.71
HOXD10P28358 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.35□□□□□ -1.71
HOXD10P28358 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC4.35□□□□□ -1.71
HOXD10P28358 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.35□□□□□ -1.71
HOXD10P28358 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.35□□□□□ -1.71
HOXD10P28358 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HOXD10P28358 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
HOXD10P28358 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.35□□□□□ -1.71
HOXD10P28358 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HOXD10P28358 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HOXD10P28358 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HOXD10P28358 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.35□□□□□ -1.71
HOXD10P28358 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.35□□□□□ -1.71
HOXD10P28358 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HOXD10P28358 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HOXD10P28358 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
HOXD10P28358 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HOXD10P28358 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.34□□□□□ -1.71
HOXD10P28358 RNU1-87P-201ENST00000363727 170 ntBASIC4.34□□□□□ -1.71
HOXD10P28358 SNORA38.1-201ENST00000364172 131 ntBASIC4.34□□□□□ -1.71
HOXD10P28358 RNU6-152P-201ENST00000384037 107 ntBASIC4.34□□□□□ -1.71
HOXD10P28358 MIR195-201ENST00000385194 87 ntBASIC4.34□□□□□ -1.71
HOXD10P28358 RNU6-328P-201ENST00000390887 106 ntBASIC4.34□□□□□ -1.71
HOXD10P28358 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.34□□□□□ -1.71
HOXD10P28358 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.34□□□□□ -1.71
HOXD10P28358 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
HOXD10P28358 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.34□□□□□ -1.71
HOXD10P28358 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.34□□□□□ -1.71
HOXD10P28358 BX842559.1-201ENST00000419615 532 ntBASIC4.34□□□□□ -1.71
HOXD10P28358 AL356806.1-201ENST00000422524 916 ntBASIC4.34□□□□□ -1.71
HOXD10P28358 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.34□□□□□ -1.71
HOXD10P28358 PRELID3BP10-201ENST00000431957 584 ntBASIC4.34□□□□□ -1.71
HOXD10P28358 AC083863.1-201ENST00000438811 231 ntBASIC4.34□□□□□ -1.71
HOXD10P28358 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.34□□□□□ -1.71
HOXD10P28358 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.34□□□□□ -1.71
HOXD10P28358 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.34□□□□□ -1.71
HOXD10P28358 RPL7P47-201ENST00000497299 556 ntBASIC4.34□□□□□ -1.71
HOXD10P28358 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.34□□□□□ -1.71
HOXD10P28358 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.34□□□□□ -1.71
HOXD10P28358 AC008802.1-201ENST00000519121 791 ntBASIC4.34□□□□□ -1.71
HOXD10P28358 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.34□□□□□ -1.71
HOXD10P28358 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.34□□□□□ -1.71
HOXD10P28358 AC007687.1-201ENST00000602704 304 ntBASIC4.34□□□□□ -1.71
HOXD10P28358 AC104662.1-201ENST00000604448 511 ntBASIC4.34□□□□□ -1.71
HOXD10P28358 AC023509.5-201ENST00000617434 807 ntBASIC4.34□□□□□ -1.71
HOXD10P28358 AC005086.4-201ENST00000623065 213 ntBASIC4.34□□□□□ -1.71
HOXD10P28358 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.34□□□□□ -1.71
HOXD10P28358 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.34□□□□□ -1.71
HOXD10P28358 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
HOXD10P28358 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.34□□□□□ -1.71
HOXD10P28358 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.34□□□□□ -1.71
HOXD10P28358 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HOXD10P28358 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms