Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.38□□□□□ -1.87
HMGA1P17096 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.38□□□□□ -1.87
HMGA1P17096 RPL7P23-201ENST00000493874 747 ntBASIC3.38□□□□□ -1.87
HMGA1P17096 PCBP2P3-201ENST00000509726 843 ntBASIC3.38□□□□□ -1.87
HMGA1P17096 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.38□□□□□ -1.87
HMGA1P17096 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.38□□□□□ -1.87
HMGA1P17096 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.38□□□□□ -1.87
HMGA1P17096 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.38□□□□□ -1.87
HMGA1P17096 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.38□□□□□ -1.87
HMGA1P17096 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.38□□□□□ -1.87
HMGA1P17096 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.38□□□□□ -1.87
HMGA1P17096 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.38□□□□□ -1.87
HMGA1P17096 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.38□□□□□ -1.87
HMGA1P17096 AC100793.4-201ENST00000613683 429 ntBASIC3.38□□□□□ -1.87
HMGA1P17096 AC138932.5-201ENST00000617759 563 ntBASIC3.38□□□□□ -1.87
HMGA1P17096 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.38□□□□□ -1.87
HMGA1P17096 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HMGA1P17096 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HMGA1P17096 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
HMGA1P17096 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
HMGA1P17096 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
HMGA1P17096 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
HMGA1P17096 AC012020.1-201ENST00000624541 1728 ntBASIC3.37□□□□□ -1.87
HMGA1P17096 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HMGA1P17096 RPL23AP57-201ENST00000332361 466 ntBASIC3.37□□□□□ -1.87
HMGA1P17096 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
HMGA1P17096 SNORA7.4-201ENST00000384249 137 ntBASIC3.37□□□□□ -1.87
HMGA1P17096 RANP4-201ENST00000413361 655 ntBASIC3.37□□□□□ -1.87
HMGA1P17096 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.37□□□□□ -1.87
HMGA1P17096 AC127526.1-201ENST00000417526 366 ntBASIC3.37□□□□□ -1.87
HMGA1P17096 ETF1P3-201ENST00000430422 1160 ntBASIC3.37□□□□□ -1.87
HMGA1P17096 RPL23AP69-201ENST00000431134 458 ntBASIC3.37□□□□□ -1.87
HMGA1P17096 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.37□□□□□ -1.87
HMGA1P17096 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.37□□□□□ -1.87
HMGA1P17096 RPL27AP5-201ENST00000469428 449 ntBASIC3.37□□□□□ -1.87
HMGA1P17096 RPL7P47-201ENST00000497299 556 ntBASIC3.37□□□□□ -1.87
HMGA1P17096 AL139174.1-201ENST00000531489 886 ntBASIC3.37□□□□□ -1.87
HMGA1P17096 AC006518.1-201ENST00000541449 943 ntBASIC3.37□□□□□ -1.87
HMGA1P17096 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.37□□□□□ -1.87
HMGA1P17096 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.37□□□□□ -1.87
HMGA1P17096 AC015849.2-201ENST00000605738 409 ntBASIC3.37□□□□□ -1.87
HMGA1P17096 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.37□□□□□ -1.87
HMGA1P17096 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC3.37□□□□□ -1.87
HMGA1P17096 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
HMGA1P17096 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
HMGA1P17096 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
HMGA1P17096 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.36□□□□□ -1.87
HMGA1P17096 RHEBP3-201ENST00000411920 351 ntBASIC3.36□□□□□ -1.87
HMGA1P17096 AC009237.5-201ENST00000414271 501 ntBASIC3.36□□□□□ -1.87
HMGA1P17096 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC3.36□□□□□ -1.87
HMGA1P17096 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.36□□□□□ -1.87
HMGA1P17096 BX890604.2-201ENST00000427883 474 ntBASIC3.36□□□□□ -1.87
HMGA1P17096 RPL7P28-201ENST00000437739 740 ntBASIC3.36□□□□□ -1.87
HMGA1P17096 AC006994.1-201ENST00000438212 839 ntBASIC3.36□□□□□ -1.87
HMGA1P17096 ELOCP23-201ENST00000452014 332 ntBASIC3.36□□□□□ -1.87
HMGA1P17096 TRBV8-2-201ENST00000475637 270 ntBASIC3.36□□□□□ -1.87
HMGA1P17096 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.36□□□□□ -1.87
HMGA1P17096 RNA5SP341-201ENST00000516261 117 ntBASIC3.36□□□□□ -1.87
HMGA1P17096 IGHV3-32-201ENST00000519182 355 ntBASIC3.36□□□□□ -1.87
HMGA1P17096 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HMGA1P17096 AC106782.4-201ENST00000568264 210 ntBASIC3.36□□□□□ -1.87
HMGA1P17096 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.36□□□□□ -1.87
HMGA1P17096 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.36□□□□□ -1.87
HMGA1P17096 AC015911.5-201ENST00000587076 451 ntBASIC3.36□□□□□ -1.87
HMGA1P17096 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.36□□□□□ -1.87
HMGA1P17096 AC011816.2-201ENST00000607089 556 ntBASIC3.36□□□□□ -1.87
HMGA1P17096 AC105227.2-201ENST00000615075 605 ntBASIC3.36□□□□□ -1.87
HMGA1P17096 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.36□□□□□ -1.87
HMGA1P17096 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HMGA1P17096 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.36□□□□□ -1.87
HMGA1P17096 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.36□□□□□ -1.87
HMGA1P17096 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HMGA1P17096 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HMGA1P17096 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
HMGA1P17096 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
HMGA1P17096 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HMGA1P17096 GNG5P1-201ENST00000255500 204 ntBASIC3.35□□□□□ -1.87
HMGA1P17096 MIR30E-201ENST00000362104 92 ntBASIC3.35□□□□□ -1.87
HMGA1P17096 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.35□□□□□ -1.87
HMGA1P17096 RPL30P2-201ENST00000414021 291 ntBASIC3.35□□□□□ -1.87
HMGA1P17096 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.35□□□□□ -1.87
HMGA1P17096 RSL24D1P3-201ENST00000449255 495 ntBASIC3.35□□□□□ -1.87
HMGA1P17096 AC087312.1-201ENST00000471411 480 ntBASIC3.35□□□□□ -1.87
HMGA1P17096 AC011825.1-201ENST00000484967 388 ntBASIC3.35□□□□□ -1.87
HMGA1P17096 VWA8P1-201ENST00000510889 176 ntBASIC3.35□□□□□ -1.87
HMGA1P17096 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.35□□□□□ -1.87
HMGA1P17096 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.35□□□□□ -1.87
HMGA1P17096 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.35□□□□□ -1.87
HMGA1P17096 AL121603.1-201ENST00000553815 142 ntBASIC3.35□□□□□ -1.87
HMGA1P17096 TGIF1P1-201ENST00000558095 802 ntBASIC3.35□□□□□ -1.87
HMGA1P17096 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
HMGA1P17096 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.35□□□□□ -1.87
HMGA1P17096 RPS4XP5-202ENST00000449995 1334 ntBASIC3.35□□□□□ -1.87
HMGA1P17096 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HMGA1P17096 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC3.35□□□□□ -1.87
HMGA1P17096 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HMGA1P17096 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
HMGA1P17096 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HMGA1P17096 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HMGA1P17096 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms