Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC4.31□□□□□ -1.72
PDGFRAP16234 AC069240.1-201ENST00000548774 375 ntBASIC4.31□□□□□ -1.72
PDGFRAP16234 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.31□□□□□ -1.72
PDGFRAP16234 AC004217.3-201ENST00000551552 878 ntBASIC4.31□□□□□ -1.72
PDGFRAP16234 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.31□□□□□ -1.72
PDGFRAP16234 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.31□□□□□ -1.72
PDGFRAP16234 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
PDGFRAP16234 MTCO1P40-201ENST00000574371 625 ntBASIC4.31□□□□□ -1.72
PDGFRAP16234 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.31□□□□□ -1.72
PDGFRAP16234 AC012417.1-201ENST00000582307 1039 ntBASIC4.31□□□□□ -1.72
PDGFRAP16234 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.31□□□□□ -1.72
PDGFRAP16234 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.31□□□□□ -1.72
PDGFRAP16234 AC005255.1-201ENST00000593748 216 ntBASIC4.31□□□□□ -1.72
PDGFRAP16234 AC009948.4-201ENST00000604692 675 ntBASIC4.31□□□□□ -1.72
PDGFRAP16234 AC113194.1-201ENST00000606037 500 ntBASIC4.31□□□□□ -1.72
PDGFRAP16234 AC124016.2-201ENST00000610058 665 ntBASIC4.31□□□□□ -1.72
PDGFRAP16234 ZYXP1-201ENST00000617638 118 ntBASIC4.31□□□□□ -1.72
PDGFRAP16234 AC022079.2-201ENST00000619739 566 ntBASIC4.31□□□□□ -1.72
PDGFRAP16234 AC010872.1-201ENST00000624225 675 ntBASIC4.31□□□□□ -1.72
PDGFRAP16234 AL356118.1-201ENST00000635272 1078 ntBASIC4.31□□□□□ -1.72
PDGFRAP16234 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PDGFRAP16234 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
PDGFRAP16234 MARK2P15-201ENST00000432204 2186 ntBASIC4.3□□□□□ -1.72
PDGFRAP16234 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
PDGFRAP16234 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.3□□□□□ -1.72
PDGFRAP16234 RNU6-353P-201ENST00000364266 108 ntBASIC4.3□□□□□ -1.72
PDGFRAP16234 RNA5SP479-201ENST00000364858 117 ntBASIC4.3□□□□□ -1.72
PDGFRAP16234 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.3□□□□□ -1.72
PDGFRAP16234 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
PDGFRAP16234 PAICSP7-201ENST00000419829 962 ntBASIC4.3□□□□□ -1.72
PDGFRAP16234 AC092832.1-201ENST00000422934 400 ntBASIC4.3□□□□□ -1.72
PDGFRAP16234 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.3□□□□□ -1.72
PDGFRAP16234 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.3□□□□□ -1.72
PDGFRAP16234 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.3□□□□□ -1.72
PDGFRAP16234 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.3□□□□□ -1.72
PDGFRAP16234 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.3□□□□□ -1.72
PDGFRAP16234 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC4.3□□□□□ -1.72
PDGFRAP16234 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.3□□□□□ -1.72
PDGFRAP16234 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.3□□□□□ -1.72
PDGFRAP16234 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC4.3□□□□□ -1.72
PDGFRAP16234 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
PDGFRAP16234 RPS7P7-201ENST00000463499 571 ntBASIC4.3□□□□□ -1.72
PDGFRAP16234 RPL7P1-201ENST00000468161 747 ntBASIC4.3□□□□□ -1.72
PDGFRAP16234 RPL7P9-201ENST00000468715 747 ntBASIC4.3□□□□□ -1.72
PDGFRAP16234 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.3□□□□□ -1.72
PDGFRAP16234 PRDX3P4-201ENST00000470828 747 ntBASIC4.3□□□□□ -1.72
PDGFRAP16234 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC4.3□□□□□ -1.72
PDGFRAP16234 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.3□□□□□ -1.72
PDGFRAP16234 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PDGFRAP16234 KRT19P6-201ENST00000510983 209 ntBASIC4.3□□□□□ -1.72
PDGFRAP16234 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.3□□□□□ -1.72
PDGFRAP16234 RNU7-143P-201ENST00000516781 65 ntBASIC4.3□□□□□ -1.72
PDGFRAP16234 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.3□□□□□ -1.72
PDGFRAP16234 HIGD1AP6-201ENST00000521833 279 ntBASIC4.3□□□□□ -1.72
PDGFRAP16234 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.3□□□□□ -1.72
PDGFRAP16234 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.3□□□□□ -1.72
PDGFRAP16234 RFPL1S-203ENST00000539579 330 ntBASIC4.3□□□□□ -1.72
PDGFRAP16234 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.3□□□□□ -1.72
PDGFRAP16234 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.3□□□□□ -1.72
PDGFRAP16234 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.3□□□□□ -1.72
PDGFRAP16234 AC007224.1-201ENST00000564410 144 ntBASIC4.3□□□□□ -1.72
PDGFRAP16234 CYP2C60P-201ENST00000566088 139 ntBASIC4.3□□□□□ -1.72
PDGFRAP16234 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.3□□□□□ -1.72
PDGFRAP16234 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.3□□□□□ -1.72
PDGFRAP16234 AC008687.2-201ENST00000597865 520 ntBASIC4.3□□□□□ -1.72
PDGFRAP16234 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.3□□□□□ -1.72
PDGFRAP16234 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.3□□□□□ -1.72
PDGFRAP16234 AP002802.2-201ENST00000605877 235 ntBASIC4.3□□□□□ -1.72
PDGFRAP16234 AC018645.2-201ENST00000609151 472 ntBASIC4.3□□□□□ -1.72
PDGFRAP16234 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.3□□□□□ -1.72
PDGFRAP16234 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.3□□□□□ -1.72
PDGFRAP16234 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.3□□□□□ -1.72
PDGFRAP16234 AC004943.3-201ENST00000624116 600 ntBASIC4.3□□□□□ -1.72
PDGFRAP16234 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.3□□□□□ -1.72
PDGFRAP16234 MIR492-201ENST00000638676 116 ntBASIC4.3□□□□□ -1.72
PDGFRAP16234 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
PDGFRAP16234 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.3□□□□□ -1.72
PDGFRAP16234 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.3□□□□□ -1.72
PDGFRAP16234 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.3□□□□□ -1.72
PDGFRAP16234 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.3□□□□□ -1.72
PDGFRAP16234 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.3□□□□□ -1.72
PDGFRAP16234 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
PDGFRAP16234 AC016716.1-201ENST00000265882 708 ntBASIC4.29□□□□□ -1.72
PDGFRAP16234 AC007685.1-201ENST00000329806 452 ntBASIC4.29□□□□□ -1.72
PDGFRAP16234 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PDGFRAP16234 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.29□□□□□ -1.72
PDGFRAP16234 RN7SKP33-201ENST00000410942 340 ntBASIC4.29□□□□□ -1.72
PDGFRAP16234 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.29□□□□□ -1.72
PDGFRAP16234 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.29□□□□□ -1.72
PDGFRAP16234 AL358472.1-201ENST00000431295 329 ntBASIC4.29□□□□□ -1.72
PDGFRAP16234 AL645931.1-201ENST00000439737 410 ntBASIC4.29□□□□□ -1.72
PDGFRAP16234 ZNF736P1Y-201ENST00000440402 1276 ntBASIC4.29□□□□□ -1.72
PDGFRAP16234 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.29□□□□□ -1.72
PDGFRAP16234 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.29□□□□□ -1.72
PDGFRAP16234 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.29□□□□□ -1.72
PDGFRAP16234 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.29□□□□□ -1.72
PDGFRAP16234 AC091959.2-201ENST00000477363 321 ntBASIC4.29□□□□□ -1.72
PDGFRAP16234 RN7SL604P-201ENST00000492589 296 ntBASIC4.29□□□□□ -1.72
PDGFRAP16234 RPL29P14-201ENST00000495837 428 ntBASIC4.29□□□□□ -1.72
PDGFRAP16234 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms