Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC5.34□□□□□ -1.55
COL6A2P12110 AC009961.2-201ENST00000435771 251 ntBASIC5.34□□□□□ -1.55
COL6A2P12110 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
COL6A2P12110 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.34□□□□□ -1.55
COL6A2P12110 MTND3P10-201ENST00000450967 341 ntBASIC5.34□□□□□ -1.55
COL6A2P12110 AL445665.1-202ENST00000452436 324 ntBASIC5.34□□□□□ -1.55
COL6A2P12110 HLA-DPA3-207ENST00000454398 229 ntBASIC5.34□□□□□ -1.55
COL6A2P12110 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
COL6A2P12110 OR6K1P-201ENST00000456766 971 ntBASIC5.34□□□□□ -1.55
COL6A2P12110 RNU7-136P-201ENST00000458819 69 ntBASIC5.34□□□□□ -1.55
COL6A2P12110 AC092754.1-201ENST00000472975 479 ntBASIC5.34□□□□□ -1.55
COL6A2P12110 AC017015.1-201ENST00000477387 286 ntBASIC5.34□□□□□ -1.55
COL6A2P12110 AC092989.1-201ENST00000481235 277 ntBASIC5.34□□□□□ -1.55
COL6A2P12110 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.34□□□□□ -1.55
COL6A2P12110 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.34□□□□□ -1.55
COL6A2P12110 AC112204.1-201ENST00000502591 103 ntBASIC5.34□□□□□ -1.55
COL6A2P12110 AC019235.1-201ENST00000503847 207 ntBASIC5.34□□□□□ -1.55
COL6A2P12110 HMGB1P29-201ENST00000505659 499 ntBASIC5.34□□□□□ -1.55
COL6A2P12110 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC5.34□□□□□ -1.55
COL6A2P12110 SNORA43.3-201ENST00000517240 103 ntBASIC5.34□□□□□ -1.55
COL6A2P12110 AP003467.2-201ENST00000520175 319 ntBASIC5.34□□□□□ -1.55
COL6A2P12110 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC5.34□□□□□ -1.55
COL6A2P12110 AP001646.1-201ENST00000527936 915 ntBASIC5.34□□□□□ -1.55
COL6A2P12110 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC5.34□□□□□ -1.55
COL6A2P12110 RPL21P5-201ENST00000554662 472 ntBASIC5.34□□□□□ -1.55
COL6A2P12110 CFL2-206ENST00000556161 546 ntTSL 4 BASIC5.34□□□□□ -1.55
COL6A2P12110 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.34□□□□□ -1.55
COL6A2P12110 AC090515.3-201ENST00000560431 315 ntBASIC5.34□□□□□ -1.55
COL6A2P12110 SULT1C2P2-201ENST00000562517 294 ntBASIC5.34□□□□□ -1.55
COL6A2P12110 MIR5186-201ENST00000577504 120 ntBASIC5.34□□□□□ -1.55
COL6A2P12110 MIR3682-201ENST00000581338 84 ntBASIC5.34□□□□□ -1.55
COL6A2P12110 PRPF19P1-201ENST00000584766 898 ntBASIC5.34□□□□□ -1.55
COL6A2P12110 BNIP3P33-201ENST00000598912 569 ntBASIC5.34□□□□□ -1.55
COL6A2P12110 AC012616.1-201ENST00000600294 197 ntBASIC5.34□□□□□ -1.55
COL6A2P12110 AP000907.4-201ENST00000604143 237 ntBASIC5.34□□□□□ -1.55
COL6A2P12110 SUGT1P3-202ENST00000604259 383 ntBASIC5.34□□□□□ -1.55
COL6A2P12110 UBE2Q2P2-203ENST00000613592 761 ntBASIC5.34□□□□□ -1.55
COL6A2P12110 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC5.34□□□□□ -1.55
COL6A2P12110 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC5.34□□□□□ -1.55
COL6A2P12110 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
COL6A2P12110 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
COL6A2P12110 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.34□□□□□ -1.55
COL6A2P12110 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
COL6A2P12110 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
COL6A2P12110 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.34□□□□□ -1.55
COL6A2P12110 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
COL6A2P12110 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
COL6A2P12110 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
COL6A2P12110 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
COL6A2P12110 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.33□□□□□ -1.56
COL6A2P12110 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL6A2P12110 RARSP1-201ENST00000542842 1418 ntBASIC5.33□□□□□ -1.56
COL6A2P12110 MAPK10-349ENST00000641767 3661 ntBASIC5.33□□□□□ -1.56
COL6A2P12110 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL6A2P12110 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL6A2P12110 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL6A2P12110 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
COL6A2P12110 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL6A2P12110 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL6A2P12110 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.33□□□□□ -1.56
COL6A2P12110 RNU6-777P-201ENST00000364265 104 ntBASIC5.33□□□□□ -1.56
COL6A2P12110 RNU4-2-201ENST00000365668 141 ntBASIC5.33□□□□□ -1.56
COL6A2P12110 Y_RNA.453-201ENST00000384223 109 ntBASIC5.33□□□□□ -1.56
COL6A2P12110 CCNG1P1-201ENST00000406783 885 ntBASIC5.33□□□□□ -1.56
COL6A2P12110 NPM1P40-201ENST00000412758 733 ntBASIC5.33□□□□□ -1.56
COL6A2P12110 AC138393.2-201ENST00000414742 246 ntBASIC5.33□□□□□ -1.56
COL6A2P12110 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
COL6A2P12110 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
COL6A2P12110 AL133173.1-201ENST00000423458 397 ntBASIC5.33□□□□□ -1.56
COL6A2P12110 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
COL6A2P12110 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC5.33□□□□□ -1.56
COL6A2P12110 AL035090.1-201ENST00000454835 332 ntBASIC5.33□□□□□ -1.56
COL6A2P12110 MTCO3P2-201ENST00000457365 171 ntBASIC5.33□□□□□ -1.56
COL6A2P12110 AC021660.1-201ENST00000465006 554 ntBASIC5.33□□□□□ -1.56
COL6A2P12110 RPS15AP17-201ENST00000470598 390 ntBASIC5.33□□□□□ -1.56
COL6A2P12110 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
COL6A2P12110 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.33□□□□□ -1.56
COL6A2P12110 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC5.33□□□□□ -1.56
COL6A2P12110 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.33□□□□□ -1.56
COL6A2P12110 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC5.33□□□□□ -1.56
COL6A2P12110 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC5.33□□□□□ -1.56
COL6A2P12110 RFPL4AP5-201ENST00000514977 504 ntBASIC5.33□□□□□ -1.56
COL6A2P12110 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.33□□□□□ -1.56
COL6A2P12110 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC5.33□□□□□ -1.56
COL6A2P12110 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.33□□□□□ -1.56
COL6A2P12110 OR5AQ1P-201ENST00000527596 927 ntBASIC5.33□□□□□ -1.56
COL6A2P12110 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.33□□□□□ -1.56
COL6A2P12110 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC5.33□□□□□ -1.56
COL6A2P12110 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.33□□□□□ -1.56
COL6A2P12110 AC079600.1-201ENST00000550326 297 ntBASIC5.33□□□□□ -1.56
COL6A2P12110 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.33□□□□□ -1.56
COL6A2P12110 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.33□□□□□ -1.56
COL6A2P12110 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.33□□□□□ -1.56
COL6A2P12110 AL391840.1-201ENST00000571144 367 ntBASIC5.33□□□□□ -1.56
COL6A2P12110 MIR4472-2-201ENST00000582069 67 ntBASIC5.33□□□□□ -1.56
COL6A2P12110 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC5.33□□□□□ -1.56
COL6A2P12110 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.33□□□□□ -1.56
COL6A2P12110 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC5.33□□□□□ -1.56
COL6A2P12110 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5.33□□□□□ -1.56
COL6A2P12110 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms