Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AC008725.1-201ENST00000605123 2263 ntBASIC3.3□□□□□ -1.88
HLA-DPB1P04440 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
HLA-DPB1P04440 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
HLA-DPB1P04440 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
HLA-DPB1P04440 RNA5SP515-201ENST00000364570 118 ntBASIC3.3□□□□□ -1.88
HLA-DPB1P04440 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.3□□□□□ -1.88
HLA-DPB1P04440 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
HLA-DPB1P04440 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.3□□□□□ -1.88
HLA-DPB1P04440 RNA5SP424-201ENST00000390988 115 ntBASIC3.3□□□□□ -1.88
HLA-DPB1P04440 PPIAP31-201ENST00000405422 495 ntBASIC3.3□□□□□ -1.88
HLA-DPB1P04440 RNU6-55P-201ENST00000411092 107 ntBASIC3.3□□□□□ -1.88
HLA-DPB1P04440 RN7SKP263-201ENST00000411194 309 ntBASIC3.3□□□□□ -1.88
HLA-DPB1P04440 RNU6-954P-201ENST00000411355 107 ntBASIC3.3□□□□□ -1.88
HLA-DPB1P04440 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.3□□□□□ -1.88
HLA-DPB1P04440 HMGB3P20-201ENST00000417997 600 ntBASIC3.3□□□□□ -1.88
HLA-DPB1P04440 RPL17P36-201ENST00000420302 549 ntBASIC3.3□□□□□ -1.88
HLA-DPB1P04440 EIF2S2P3-201ENST00000428356 999 ntBASIC3.3□□□□□ -1.88
HLA-DPB1P04440 AC073069.1-201ENST00000428657 441 ntBASIC3.3□□□□□ -1.88
HLA-DPB1P04440 RPS24P8-201ENST00000431490 402 ntBASIC3.3□□□□□ -1.88
HLA-DPB1P04440 MRPS18BP2-201ENST00000434310 759 ntBASIC3.3□□□□□ -1.88
HLA-DPB1P04440 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.3□□□□□ -1.88
HLA-DPB1P04440 RPS29P7-201ENST00000439662 171 ntBASIC3.3□□□□□ -1.88
HLA-DPB1P04440 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.3□□□□□ -1.88
HLA-DPB1P04440 AL513321.1-201ENST00000441175 761 ntBASIC3.3□□□□□ -1.88
HLA-DPB1P04440 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.3□□□□□ -1.88
HLA-DPB1P04440 OR9M1P-201ENST00000459641 921 ntBASIC3.3□□□□□ -1.88
HLA-DPB1P04440 AC087312.1-201ENST00000471411 480 ntBASIC3.3□□□□□ -1.88
HLA-DPB1P04440 AL161747.1-201ENST00000480068 358 ntBASIC3.3□□□□□ -1.88
HLA-DPB1P04440 VN1R105P-201ENST00000486595 910 ntBASIC3.3□□□□□ -1.88
HLA-DPB1P04440 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HLA-DPB1P04440 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.3□□□□□ -1.88
HLA-DPB1P04440 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.3□□□□□ -1.88
HLA-DPB1P04440 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.3□□□□□ -1.88
HLA-DPB1P04440 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.3□□□□□ -1.88
HLA-DPB1P04440 AP000926.4-201ENST00000527351 454 ntBASIC3.3□□□□□ -1.88
HLA-DPB1P04440 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.3□□□□□ -1.88
HLA-DPB1P04440 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
HLA-DPB1P04440 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
HLA-DPB1P04440 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HLA-DPB1P04440 MIR4286-201ENST00000580651 93 ntBASIC3.3□□□□□ -1.88
HLA-DPB1P04440 AC053481.4-201ENST00000583164 216 ntBASIC3.3□□□□□ -1.88
HLA-DPB1P04440 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.3□□□□□ -1.88
HLA-DPB1P04440 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.3□□□□□ -1.88
HLA-DPB1P04440 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC3.3□□□□□ -1.88
HLA-DPB1P04440 ZNF90P1-201ENST00000480493 1951 ntBASIC3.3□□□□□ -1.88
HLA-DPB1P04440 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HLA-DPB1P04440 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.3□□□□□ -1.88
HLA-DPB1P04440 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.3□□□□□ -1.88
HLA-DPB1P04440 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
HLA-DPB1P04440 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.29□□□□□ -1.88
HLA-DPB1P04440 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
HLA-DPB1P04440 AL049555.1-201ENST00000562834 1933 ntBASIC3.29□□□□□ -1.88
HLA-DPB1P04440 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
HLA-DPB1P04440 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HLA-DPB1P04440 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.29□□□□□ -1.88
HLA-DPB1P04440 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.29□□□□□ -1.88
HLA-DPB1P04440 RNA5SP235-201ENST00000365411 114 ntBASIC3.29□□□□□ -1.88
HLA-DPB1P04440 RNU6-213P-201ENST00000384051 104 ntBASIC3.29□□□□□ -1.88
HLA-DPB1P04440 RNU6-1005P-201ENST00000384519 107 ntBASIC3.29□□□□□ -1.88
HLA-DPB1P04440 MIR142-201ENST00000384835 87 ntBASIC3.29□□□□□ -1.88
HLA-DPB1P04440 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
HLA-DPB1P04440 AC136624.1-201ENST00000400791 413 ntBASIC3.29□□□□□ -1.88
HLA-DPB1P04440 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.29□□□□□ -1.88
HLA-DPB1P04440 RPL7P2-201ENST00000427639 268 ntBASIC3.29□□□□□ -1.88
HLA-DPB1P04440 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.29□□□□□ -1.88
HLA-DPB1P04440 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.29□□□□□ -1.88
HLA-DPB1P04440 Z74696.2-201ENST00000436514 498 ntBASIC3.29□□□□□ -1.88
HLA-DPB1P04440 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.29□□□□□ -1.88
HLA-DPB1P04440 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.29□□□□□ -1.88
HLA-DPB1P04440 TPTE2P6-202ENST00000445572 1007 ntBASIC3.29□□□□□ -1.88
HLA-DPB1P04440 AC069540.1-201ENST00000446320 988 ntBASIC3.29□□□□□ -1.88
HLA-DPB1P04440 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.29□□□□□ -1.88
HLA-DPB1P04440 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.29□□□□□ -1.88
HLA-DPB1P04440 RPL23AP23-201ENST00000452590 471 ntBASIC3.29□□□□□ -1.88
HLA-DPB1P04440 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HLA-DPB1P04440 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.29□□□□□ -1.88
HLA-DPB1P04440 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.29□□□□□ -1.88
HLA-DPB1P04440 RPL6P9-201ENST00000466502 859 ntBASIC3.29□□□□□ -1.88
HLA-DPB1P04440 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC3.29□□□□□ -1.88
HLA-DPB1P04440 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.29□□□□□ -1.88
HLA-DPB1P04440 RN7SL323P-201ENST00000494712 295 ntBASIC3.29□□□□□ -1.88
HLA-DPB1P04440 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.29□□□□□ -1.88
HLA-DPB1P04440 SNORD116-26-201ENST00000516006 96 ntBASIC3.29□□□□□ -1.88
HLA-DPB1P04440 RNU6-352P-201ENST00000516908 107 ntBASIC3.29□□□□□ -1.88
HLA-DPB1P04440 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.29□□□□□ -1.88
HLA-DPB1P04440 CIR1P1-201ENST00000524055 1133 ntBASIC3.29□□□□□ -1.88
HLA-DPB1P04440 AP001636.2-201ENST00000525517 696 ntBASIC3.29□□□□□ -1.88
HLA-DPB1P04440 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
HLA-DPB1P04440 TOMM20P2-201ENST00000540082 421 ntBASIC3.29□□□□□ -1.88
HLA-DPB1P04440 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.29□□□□□ -1.88
HLA-DPB1P04440 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.29□□□□□ -1.88
HLA-DPB1P04440 AC106785.3-201ENST00000564064 847 ntBASIC3.29□□□□□ -1.88
HLA-DPB1P04440 AC233266.2-201ENST00000567067 528 ntBASIC3.29□□□□□ -1.88
HLA-DPB1P04440 HNRNPCP4-201ENST00000571636 900 ntBASIC3.29□□□□□ -1.88
HLA-DPB1P04440 MTND4LP24-201ENST00000572277 291 ntBASIC3.29□□□□□ -1.88
HLA-DPB1P04440 MIR3160-1-201ENST00000577972 85 ntBASIC3.29□□□□□ -1.88
HLA-DPB1P04440 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.29□□□□□ -1.88
HLA-DPB1P04440 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.29□□□□□ -1.88
HLA-DPB1P04440 AC011374.2-201ENST00000607135 526 ntBASIC3.29□□□□□ -1.88
HLA-DPB1P04440 MIR1264-201ENST00000616374 69 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms