Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AP001372.4-201ENST00000524889 472 ntBASIC3.81□□□□□ -1.8
MT-ND1P03886 MTND2P26-201ENST00000528255 1029 ntBASIC3.81□□□□□ -1.8
MT-ND1P03886 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.81□□□□□ -1.8
MT-ND1P03886 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.81□□□□□ -1.8
MT-ND1P03886 ATP5F1P7-201ENST00000567330 760 ntBASIC3.81□□□□□ -1.8
MT-ND1P03886 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.81□□□□□ -1.8
MT-ND1P03886 AP003392.5-201ENST00000607857 415 ntBASIC3.81□□□□□ -1.8
MT-ND1P03886 AC022079.2-201ENST00000619739 566 ntBASIC3.81□□□□□ -1.8
MT-ND1P03886 C2orf27A-204ENST00000623058 969 ntBASIC3.81□□□□□ -1.8
MT-ND1P03886 AC006065.5-201ENST00000623427 349 ntBASIC3.81□□□□□ -1.8
MT-ND1P03886 AP005264.7-201ENST00000625003 745 ntBASIC3.81□□□□□ -1.8
MT-ND1P03886 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
MT-ND1P03886 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.81□□□□□ -1.8
MT-ND1P03886 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
MT-ND1P03886 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
MT-ND1P03886 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
MT-ND1P03886 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
MT-ND1P03886 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
MT-ND1P03886 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.8□□□□□ -1.8
MT-ND1P03886 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
MT-ND1P03886 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.8□□□□□ -1.8
MT-ND1P03886 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
MT-ND1P03886 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
MT-ND1P03886 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
MT-ND1P03886 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
MT-ND1P03886 SNORA72.3-201ENST00000365074 132 ntBASIC3.8□□□□□ -1.8
MT-ND1P03886 AC234772.1-201ENST00000377927 937 ntBASIC3.8□□□□□ -1.8
MT-ND1P03886 RNU6-398P-201ENST00000384143 109 ntBASIC3.8□□□□□ -1.8
MT-ND1P03886 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.8□□□□□ -1.8
MT-ND1P03886 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
MT-ND1P03886 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC3.8□□□□□ -1.8
MT-ND1P03886 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.8□□□□□ -1.8
MT-ND1P03886 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC3.8□□□□□ -1.8
MT-ND1P03886 MTCO2P23-201ENST00000425216 680 ntBASIC3.8□□□□□ -1.8
MT-ND1P03886 RPS29P17-201ENST00000430795 166 ntBASIC3.8□□□□□ -1.8
MT-ND1P03886 AC096638.2-201ENST00000434965 711 ntBASIC3.8□□□□□ -1.8
MT-ND1P03886 USP9YP7-201ENST00000436723 430 ntBASIC3.8□□□□□ -1.8
MT-ND1P03886 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.8□□□□□ -1.8
MT-ND1P03886 FABP5P3-201ENST00000437960 408 ntBASIC3.8□□□□□ -1.8
MT-ND1P03886 ARF4P4-201ENST00000439608 520 ntBASIC3.8□□□□□ -1.8
MT-ND1P03886 UBE2V1P5-201ENST00000440070 405 ntBASIC3.8□□□□□ -1.8
MT-ND1P03886 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.8□□□□□ -1.8
MT-ND1P03886 RPL29P29-201ENST00000448725 423 ntBASIC3.8□□□□□ -1.8
MT-ND1P03886 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
MT-ND1P03886 USP9YP32-201ENST00000452432 430 ntBASIC3.8□□□□□ -1.8
MT-ND1P03886 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.8□□□□□ -1.8
MT-ND1P03886 AC008280.2-201ENST00000455473 307 ntBASIC3.8□□□□□ -1.8
MT-ND1P03886 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
MT-ND1P03886 GTF2IP12-201ENST00000456547 356 ntBASIC3.8□□□□□ -1.8
MT-ND1P03886 RPL36AP13-201ENST00000457490 317 ntBASIC3.8□□□□□ -1.8
MT-ND1P03886 RPL23AP24-201ENST00000458203 385 ntBASIC3.8□□□□□ -1.8
MT-ND1P03886 AC104164.3-201ENST00000467363 1258 ntBASIC3.8□□□□□ -1.8
MT-ND1P03886 RPL35P6-201ENST00000490024 372 ntBASIC3.8□□□□□ -1.8
MT-ND1P03886 TPT1P3-201ENST00000492841 512 ntBASIC3.8□□□□□ -1.8
MT-ND1P03886 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.8□□□□□ -1.8
MT-ND1P03886 RN7SL691P-201ENST00000494487 301 ntBASIC3.8□□□□□ -1.8
MT-ND1P03886 AC008427.1-201ENST00000503102 655 ntBASIC3.8□□□□□ -1.8
MT-ND1P03886 AC093720.1-201ENST00000505681 714 ntBASIC3.8□□□□□ -1.8
MT-ND1P03886 BTF3L4P4-201ENST00000506381 449 ntBASIC3.8□□□□□ -1.8
MT-ND1P03886 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
MT-ND1P03886 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.8□□□□□ -1.8
MT-ND1P03886 AC018797.3-201ENST00000513388 1241 ntBASIC3.8□□□□□ -1.8
MT-ND1P03886 OR8L1P-201ENST00000534005 955 ntBASIC3.8□□□□□ -1.8
MT-ND1P03886 TRAV8-5-201ENST00000537369 341 ntBASIC3.8□□□□□ -1.8
MT-ND1P03886 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.8□□□□□ -1.8
MT-ND1P03886 CYB5AP5-201ENST00000549779 389 ntBASIC3.8□□□□□ -1.8
MT-ND1P03886 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC3.8□□□□□ -1.8
MT-ND1P03886 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.8□□□□□ -1.8
MT-ND1P03886 AC012417.1-201ENST00000582307 1039 ntBASIC3.8□□□□□ -1.8
MT-ND1P03886 MIR4715-201ENST00000584117 79 ntBASIC3.8□□□□□ -1.8
MT-ND1P03886 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.8□□□□□ -1.8
MT-ND1P03886 AC114878.2-201ENST00000604863 1251 ntBASIC3.8□□□□□ -1.8
MT-ND1P03886 AP002802.2-201ENST00000605877 235 ntBASIC3.8□□□□□ -1.8
MT-ND1P03886 AC019193.2-201ENST00000610012 634 ntBASIC3.8□□□□□ -1.8
MT-ND1P03886 AL355816.2-201ENST00000610049 647 ntBASIC3.8□□□□□ -1.8
MT-ND1P03886 AC096586.1-201ENST00000610267 561 ntBASIC3.8□□□□□ -1.8
MT-ND1P03886 AC078899.5-201ENST00000612475 178 ntBASIC3.8□□□□□ -1.8
MT-ND1P03886 AC004825.2-201ENST00000616634 455 ntBASIC3.8□□□□□ -1.8
MT-ND1P03886 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.8□□□□□ -1.8
MT-ND1P03886 AC092608.3-201ENST00000625017 386 ntBASIC3.8□□□□□ -1.8
MT-ND1P03886 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.8□□□□□ -1.8
MT-ND1P03886 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.8□□□□□ -1.8
MT-ND1P03886 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.8□□□□□ -1.8
MT-ND1P03886 AC013437.2-201ENST00000639587 677 ntBASIC3.8□□□□□ -1.8
MT-ND1P03886 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
MT-ND1P03886 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
MT-ND1P03886 ZNF849P-201ENST00000594711 1566 ntBASIC3.8□□□□□ -1.8
MT-ND1P03886 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
MT-ND1P03886 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
MT-ND1P03886 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.8□□□□□ -1.8
MT-ND1P03886 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
MT-ND1P03886 NCAPGP1-201ENST00000505112 1814 ntBASIC3.79□□□□□ -1.8
MT-ND1P03886 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
MT-ND1P03886 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
MT-ND1P03886 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
MT-ND1P03886 MAPK10-373ENST00000641983 6772 ntBASIC3.79□□□□□ -1.8
MT-ND1P03886 RNU5B-1-201ENST00000363286 116 ntBASIC3.79□□□□□ -1.8
MT-ND1P03886 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.79□□□□□ -1.8
MT-ND1P03886 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
MT-ND1P03886 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms