Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 DNAJC19P8-201ENST00000452887 259 ntBASIC2.91□□□□□ -1.94
HLA-DQA1P01909 HMGN2P7-201ENST00000456186 273 ntBASIC2.91□□□□□ -1.94
HLA-DQA1P01909 snoU13.1-201ENST00000459157 104 ntBASIC2.91□□□□□ -1.94
HLA-DQA1P01909 AC087312.1-201ENST00000471411 480 ntBASIC2.91□□□□□ -1.94
HLA-DQA1P01909 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC2.91□□□□□ -1.94
HLA-DQA1P01909 RPL7P47-201ENST00000497299 556 ntBASIC2.91□□□□□ -1.94
HLA-DQA1P01909 OR5H3P-201ENST00000502817 919 ntBASIC2.91□□□□□ -1.94
HLA-DQA1P01909 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC2.91□□□□□ -1.94
HLA-DQA1P01909 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC2.91□□□□□ -1.94
HLA-DQA1P01909 AC093824.1-201ENST00000508796 343 ntBASIC2.91□□□□□ -1.94
HLA-DQA1P01909 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC2.91□□□□□ -1.94
HLA-DQA1P01909 KRT19P6-201ENST00000510983 209 ntBASIC2.91□□□□□ -1.94
HLA-DQA1P01909 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC2.91□□□□□ -1.94
HLA-DQA1P01909 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC2.91□□□□□ -1.94
HLA-DQA1P01909 AC093331.1-201ENST00000521474 169 ntBASIC2.91□□□□□ -1.94
HLA-DQA1P01909 AC105233.3-201ENST00000531125 744 ntBASIC2.91□□□□□ -1.94
HLA-DQA1P01909 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC2.91□□□□□ -1.94
HLA-DQA1P01909 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
HLA-DQA1P01909 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC2.91□□□□□ -1.94
HLA-DQA1P01909 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC2.91□□□□□ -1.94
HLA-DQA1P01909 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC2.91□□□□□ -1.94
HLA-DQA1P01909 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC2.91□□□□□ -1.94
HLA-DQA1P01909 AC022655.2-201ENST00000577280 318 ntBASIC2.91□□□□□ -1.94
HLA-DQA1P01909 MIR3186-201ENST00000577404 85 ntBASIC2.91□□□□□ -1.94
HLA-DQA1P01909 MIR5684-201ENST00000585074 65 ntBASIC2.91□□□□□ -1.94
HLA-DQA1P01909 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
HLA-DQA1P01909 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC2.91□□□□□ -1.94
HLA-DQA1P01909 AC234771.5-201ENST00000600161 514 ntBASIC2.91□□□□□ -1.94
HLA-DQA1P01909 AL049634.3-201ENST00000604968 457 ntBASIC2.91□□□□□ -1.94
HLA-DQA1P01909 AL392112.1-201ENST00000605115 829 ntBASIC2.91□□□□□ -1.94
HLA-DQA1P01909 AC096586.1-201ENST00000610267 561 ntBASIC2.91□□□□□ -1.94
HLA-DQA1P01909 AL450489.1-201ENST00000612071 468 ntBASIC2.91□□□□□ -1.94
HLA-DQA1P01909 FAM27D1-201ENST00000612308 341 ntBASIC2.91□□□□□ -1.94
HLA-DQA1P01909 MIR8084-201ENST00000614105 89 ntBASIC2.91□□□□□ -1.94
HLA-DQA1P01909 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC2.91□□□□□ -1.94
HLA-DQA1P01909 AL445363.3-201ENST00000623080 671 ntBASIC2.91□□□□□ -1.94
HLA-DQA1P01909 AP003400.6-201ENST00000624698 740 ntBASIC2.91□□□□□ -1.94
HLA-DQA1P01909 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
HLA-DQA1P01909 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC2.91□□□□□ -1.94
HLA-DQA1P01909 AL132640.2-201ENST00000559968 1698 ntBASIC2.91□□□□□ -1.94
HLA-DQA1P01909 HSP90AA5P-201ENST00000438353 2192 ntBASIC2.91□□□□□ -1.94
HLA-DQA1P01909 ZNF542P-204ENST00000482727 1305 ntBASIC2.91□□□□□ -1.94
HLA-DQA1P01909 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
HLA-DQA1P01909 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC2.9□□□□□ -1.94
HLA-DQA1P01909 TANK-205ENST00000405852 2155 ntTSL 5 BASIC2.9□□□□□ -1.94
HLA-DQA1P01909 SEC63P2-201ENST00000503863 1939 ntBASIC2.9□□□□□ -1.95
HLA-DQA1P01909 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
HLA-DQA1P01909 AC116667.1-201ENST00000604855 2072 ntBASIC2.9□□□□□ -1.95
HLA-DQA1P01909 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
HLA-DQA1P01909 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
HLA-DQA1P01909 RNU1-14P-201ENST00000362759 152 ntBASIC2.9□□□□□ -1.95
HLA-DQA1P01909 RNA5SP447-201ENST00000363749 119 ntBASIC2.9□□□□□ -1.95
HLA-DQA1P01909 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC2.9□□□□□ -1.95
HLA-DQA1P01909 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
HLA-DQA1P01909 RNU6-1293P-201ENST00000384077 107 ntBASIC2.9□□□□□ -1.95
HLA-DQA1P01909 AL583835.1-201ENST00000399570 407 ntBASIC2.9□□□□□ -1.95
HLA-DQA1P01909 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC2.9□□□□□ -1.95
HLA-DQA1P01909 RNU6-55P-201ENST00000411092 107 ntBASIC2.9□□□□□ -1.95
HLA-DQA1P01909 RNU2-72P-201ENST00000411175 163 ntBASIC2.9□□□□□ -1.95
HLA-DQA1P01909 RNU6-954P-201ENST00000411355 107 ntBASIC2.9□□□□□ -1.95
HLA-DQA1P01909 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC2.9□□□□□ -1.95
HLA-DQA1P01909 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC2.9□□□□□ -1.95
HLA-DQA1P01909 RPL26P29-201ENST00000415623 438 ntBASIC2.9□□□□□ -1.95
HLA-DQA1P01909 AC008173.1-201ENST00000418901 264 ntBASIC2.9□□□□□ -1.95
HLA-DQA1P01909 RPL17P36-201ENST00000420302 549 ntBASIC2.9□□□□□ -1.95
HLA-DQA1P01909 AL356387.2-201ENST00000422272 243 ntBASIC2.9□□□□□ -1.95
HLA-DQA1P01909 AC245028.1-201ENST00000423259 256 ntBASIC2.9□□□□□ -1.95
HLA-DQA1P01909 MTCO2P1-201ENST00000424648 477 ntBASIC2.9□□□□□ -1.95
HLA-DQA1P01909 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC2.9□□□□□ -1.95
HLA-DQA1P01909 AC093422.3-201ENST00000428506 305 ntBASIC2.9□□□□□ -1.95
HLA-DQA1P01909 RPL23AP1-201ENST00000428990 471 ntBASIC2.9□□□□□ -1.95
HLA-DQA1P01909 AL358472.1-201ENST00000431295 329 ntBASIC2.9□□□□□ -1.95
HLA-DQA1P01909 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC2.9□□□□□ -1.95
HLA-DQA1P01909 RPL23AP52-201ENST00000439311 478 ntBASIC2.9□□□□□ -1.95
HLA-DQA1P01909 AC006011.1-201ENST00000442758 349 ntBASIC2.9□□□□□ -1.95
HLA-DQA1P01909 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC2.9□□□□□ -1.95
HLA-DQA1P01909 RPL7P55-201ENST00000450522 746 ntBASIC2.9□□□□□ -1.95
HLA-DQA1P01909 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC2.9□□□□□ -1.95
HLA-DQA1P01909 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC2.9□□□□□ -1.95
HLA-DQA1P01909 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC2.9□□□□□ -1.95
HLA-DQA1P01909 RPL23AP24-201ENST00000458203 385 ntBASIC2.9□□□□□ -1.95
HLA-DQA1P01909 AC018635.1-201ENST00000468292 1030 ntBASIC2.9□□□□□ -1.95
HLA-DQA1P01909 AC006463.2-201ENST00000473326 348 ntBASIC2.9□□□□□ -1.95
HLA-DQA1P01909 RPS4XP22-201ENST00000480755 780 ntBASIC2.9□□□□□ -1.95
HLA-DQA1P01909 RPL21P47-201ENST00000483696 477 ntBASIC2.9□□□□□ -1.95
HLA-DQA1P01909 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC2.9□□□□□ -1.95
HLA-DQA1P01909 ACTG1P13-201ENST00000486987 1043 ntBASIC2.9□□□□□ -1.95
HLA-DQA1P01909 RN7SL810P-201ENST00000493031 276 ntBASIC2.9□□□□□ -1.95
HLA-DQA1P01909 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC2.9□□□□□ -1.95
HLA-DQA1P01909 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
HLA-DQA1P01909 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC2.9□□□□□ -1.95
HLA-DQA1P01909 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC2.9□□□□□ -1.95
HLA-DQA1P01909 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.9□□□□□ -1.95
HLA-DQA1P01909 CDH12P4-201ENST00000517835 295 ntBASIC2.9□□□□□ -1.95
HLA-DQA1P01909 CDH12P3-201ENST00000517935 295 ntBASIC2.9□□□□□ -1.95
HLA-DQA1P01909 CDH12P1-201ENST00000518435 295 ntBASIC2.9□□□□□ -1.95
HLA-DQA1P01909 AC010306.1-201ENST00000523223 1117 ntBASIC2.9□□□□□ -1.95
HLA-DQA1P01909 AP001636.2-201ENST00000525517 696 ntBASIC2.9□□□□□ -1.95
HLA-DQA1P01909 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC2.9□□□□□ -1.95
HLA-DQA1P01909 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms