Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CTDNEP1O95476 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC3.89□□□□□ -1.79
CTDNEP1O95476 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.89□□□□□ -1.79
CTDNEP1O95476 RNU6-751P-201ENST00000516382 101 ntBASIC3.89□□□□□ -1.79
CTDNEP1O95476 RNU4-18P-201ENST00000516751 149 ntBASIC3.89□□□□□ -1.79
CTDNEP1O95476 AC022784.5-201ENST00000522241 437 ntBASIC3.89□□□□□ -1.79
CTDNEP1O95476 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC3.89□□□□□ -1.79
CTDNEP1O95476 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC3.89□□□□□ -1.79
CTDNEP1O95476 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CTDNEP1O95476 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.89□□□□□ -1.79
CTDNEP1O95476 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.89□□□□□ -1.79
CTDNEP1O95476 RPL21P12-201ENST00000559810 515 ntBASIC3.89□□□□□ -1.79
CTDNEP1O95476 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.89□□□□□ -1.79
CTDNEP1O95476 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC3.89□□□□□ -1.79
CTDNEP1O95476 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.89□□□□□ -1.79
CTDNEP1O95476 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.89□□□□□ -1.79
CTDNEP1O95476 ELOCP34-201ENST00000604436 327 ntBASIC3.89□□□□□ -1.79
CTDNEP1O95476 GMCL1P2-201ENST00000605230 823 ntBASIC3.89□□□□□ -1.79
CTDNEP1O95476 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.89□□□□□ -1.79
CTDNEP1O95476 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.89□□□□□ -1.79
CTDNEP1O95476 AC004825.2-201ENST00000616634 455 ntBASIC3.89□□□□□ -1.79
CTDNEP1O95476 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CTDNEP1O95476 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CTDNEP1O95476 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CTDNEP1O95476 HSPA8P19-201ENST00000505359 1517 ntBASIC3.89□□□□□ -1.79
CTDNEP1O95476 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CTDNEP1O95476 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.89□□□□□ -1.79
CTDNEP1O95476 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
CTDNEP1O95476 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
CTDNEP1O95476 PRO1804-201ENST00000623780 2050 ntBASIC3.88□□□□□ -1.79
CTDNEP1O95476 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CTDNEP1O95476 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.88□□□□□ -1.79
CTDNEP1O95476 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CTDNEP1O95476 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.88□□□□□ -1.79
CTDNEP1O95476 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.88□□□□□ -1.79
CTDNEP1O95476 AL049781.1-201ENST00000623195 3585 ntBASIC3.88□□□□□ -1.79
CTDNEP1O95476 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CTDNEP1O95476 RNA5SP229-201ENST00000410809 99 ntBASIC3.88□□□□□ -1.79
CTDNEP1O95476 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC3.88□□□□□ -1.79
CTDNEP1O95476 HSFY4P-201ENST00000415994 1181 ntBASIC3.88□□□□□ -1.79
CTDNEP1O95476 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CTDNEP1O95476 RFESDP1-201ENST00000422350 461 ntBASIC3.88□□□□□ -1.79
CTDNEP1O95476 GTF2IP23-201ENST00000423746 351 ntBASIC3.88□□□□□ -1.79
CTDNEP1O95476 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.88□□□□□ -1.79
CTDNEP1O95476 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.88□□□□□ -1.79
CTDNEP1O95476 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC3.88□□□□□ -1.79
CTDNEP1O95476 AC087312.1-201ENST00000471411 480 ntBASIC3.88□□□□□ -1.79
CTDNEP1O95476 SNORA67.7-201ENST00000516664 135 ntBASIC3.88□□□□□ -1.79
CTDNEP1O95476 AC104027.1-201ENST00000521887 300 ntBASIC3.88□□□□□ -1.79
CTDNEP1O95476 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.88□□□□□ -1.79
CTDNEP1O95476 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.88□□□□□ -1.79
CTDNEP1O95476 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.88□□□□□ -1.79
CTDNEP1O95476 AC084757.1-201ENST00000559987 490 ntBASIC3.88□□□□□ -1.79
CTDNEP1O95476 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.88□□□□□ -1.79
CTDNEP1O95476 MIR3158-1-201ENST00000583596 81 ntBASIC3.88□□□□□ -1.79
CTDNEP1O95476 AC107905.1-201ENST00000616204 426 ntBASIC3.88□□□□□ -1.79
CTDNEP1O95476 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC3.88□□□□□ -1.79
CTDNEP1O95476 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CTDNEP1O95476 AC017071.1-201ENST00000564407 2204 ntBASIC3.88□□□□□ -1.79
CTDNEP1O95476 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
CTDNEP1O95476 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CTDNEP1O95476 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.88□□□□□ -1.79
CTDNEP1O95476 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.88□□□□□ -1.79
CTDNEP1O95476 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CTDNEP1O95476 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CTDNEP1O95476 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CTDNEP1O95476 MIR218-2-201ENST00000385006 110 ntBASIC3.87□□□□□ -1.79
CTDNEP1O95476 RPS29P4-201ENST00000414733 161 ntBASIC3.87□□□□□ -1.79
CTDNEP1O95476 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.87□□□□□ -1.79
CTDNEP1O95476 RPL23AP4-201ENST00000427757 463 ntBASIC3.87□□□□□ -1.79
CTDNEP1O95476 UBE2V2P3-201ENST00000433562 437 ntBASIC3.87□□□□□ -1.79
CTDNEP1O95476 HMGB3P11-201ENST00000440127 604 ntBASIC3.87□□□□□ -1.79
CTDNEP1O95476 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.87□□□□□ -1.79
CTDNEP1O95476 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.87□□□□□ -1.79
CTDNEP1O95476 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.87□□□□□ -1.79
CTDNEP1O95476 RPL23AP67-201ENST00000465341 474 ntBASIC3.87□□□□□ -1.79
CTDNEP1O95476 CYCSP20-201ENST00000473154 315 ntBASIC3.87□□□□□ -1.79
CTDNEP1O95476 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
CTDNEP1O95476 HAUS1P1-201ENST00000505275 832 ntBASIC3.87□□□□□ -1.79
CTDNEP1O95476 AC147055.1-201ENST00000509261 750 ntBASIC3.87□□□□□ -1.79
CTDNEP1O95476 FCF1P8-201ENST00000510322 597 ntBASIC3.87□□□□□ -1.79
CTDNEP1O95476 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.87□□□□□ -1.79
CTDNEP1O95476 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.87□□□□□ -1.79
CTDNEP1O95476 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.87□□□□□ -1.79
CTDNEP1O95476 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CTDNEP1O95476 CCNG2P1-201ENST00000549521 1000 ntBASIC3.87□□□□□ -1.79
CTDNEP1O95476 AC092868.3-201ENST00000560515 784 ntBASIC3.87□□□□□ -1.79
CTDNEP1O95476 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.87□□□□□ -1.79
CTDNEP1O95476 MTATP6P25-201ENST00000574491 261 ntBASIC3.87□□□□□ -1.79
CTDNEP1O95476 AL365400.2-201ENST00000605604 902 ntBASIC3.87□□□□□ -1.79
CTDNEP1O95476 SNORA51-201ENST00000606420 132 ntBASIC3.87□□□□□ -1.79
CTDNEP1O95476 AC012557.1-201ENST00000607115 611 ntBASIC3.87□□□□□ -1.79
CTDNEP1O95476 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.87□□□□□ -1.79
CTDNEP1O95476 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CTDNEP1O95476 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CTDNEP1O95476 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.87□□□□□ -1.79
CTDNEP1O95476 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC3.86□□□□□ -1.79
CTDNEP1O95476 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CTDNEP1O95476 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CTDNEP1O95476 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms