Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
ZNF253O75346 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
ZNF253O75346 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
ZNF253O75346 AC015813.6-201ENST00000624409 5808 ntBASIC3.34□□□□□ -1.87
ZNF253O75346 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
ZNF253O75346 AC007529.1-201ENST00000418574 2178 ntBASIC3.34□□□□□ -1.87
ZNF253O75346 AC010300.1-201ENST00000600671 5134 ntBASIC3.34□□□□□ -1.87
ZNF253O75346 MIR3065-201ENST00000390137 79 ntBASIC3.34□□□□□ -1.87
ZNF253O75346 MIR298-201ENST00000401212 88 ntBASIC3.34□□□□□ -1.87
ZNF253O75346 AL139098.1-201ENST00000407291 389 ntBASIC3.34□□□□□ -1.87
ZNF253O75346 MIR1183-201ENST00000408856 89 ntBASIC3.34□□□□□ -1.87
ZNF253O75346 RN7SKP229-201ENST00000410465 302 ntBASIC3.34□□□□□ -1.87
ZNF253O75346 RPS24P7-201ENST00000416921 246 ntBASIC3.34□□□□□ -1.87
ZNF253O75346 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC3.34□□□□□ -1.87
ZNF253O75346 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.34□□□□□ -1.87
ZNF253O75346 EIF1P3-201ENST00000423841 334 ntBASIC3.34□□□□□ -1.87
ZNF253O75346 AL365396.1-201ENST00000430854 671 ntBASIC3.34□□□□□ -1.87
ZNF253O75346 AC073648.4-201ENST00000442655 781 ntBASIC3.34□□□□□ -1.87
ZNF253O75346 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.34□□□□□ -1.87
ZNF253O75346 RPL7P59-201ENST00000447700 943 ntBASIC3.34□□□□□ -1.87
ZNF253O75346 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.34□□□□□ -1.87
ZNF253O75346 RPL23AP15-201ENST00000450202 459 ntBASIC3.34□□□□□ -1.87
ZNF253O75346 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.34□□□□□ -1.87
ZNF253O75346 HIGD1AP8-201ENST00000453927 274 ntBASIC3.34□□□□□ -1.87
ZNF253O75346 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC3.34□□□□□ -1.87
ZNF253O75346 RN7SL629P-201ENST00000489622 285 ntBASIC3.34□□□□□ -1.87
ZNF253O75346 AC098862.1-201ENST00000504991 413 ntBASIC3.34□□□□□ -1.87
ZNF253O75346 AC109458.1-201ENST00000508858 316 ntBASIC3.34□□□□□ -1.87
ZNF253O75346 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
ZNF253O75346 KRT19P6-201ENST00000510983 209 ntBASIC3.34□□□□□ -1.87
ZNF253O75346 AC112673.1-201ENST00000513168 575 ntBASIC3.34□□□□□ -1.87
ZNF253O75346 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.34□□□□□ -1.87
ZNF253O75346 NARSP2-201ENST00000518524 679 ntBASIC3.34□□□□□ -1.87
ZNF253O75346 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.34□□□□□ -1.87
ZNF253O75346 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.34□□□□□ -1.87
ZNF253O75346 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.34□□□□□ -1.87
ZNF253O75346 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC3.34□□□□□ -1.87
ZNF253O75346 AADACP1-206ENST00000561502 1193 ntBASIC3.34□□□□□ -1.87
ZNF253O75346 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC3.34□□□□□ -1.87
ZNF253O75346 UBE2FP2-201ENST00000566646 462 ntBASIC3.34□□□□□ -1.87
ZNF253O75346 AC016180.1-201ENST00000567945 403 ntBASIC3.34□□□□□ -1.87
ZNF253O75346 MIR4644-201ENST00000579929 84 ntBASIC3.34□□□□□ -1.87
ZNF253O75346 AC073091.2-201ENST00000603205 907 ntBASIC3.34□□□□□ -1.87
ZNF253O75346 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.34□□□□□ -1.87
ZNF253O75346 AL390816.3-201ENST00000604527 1066 ntBASIC3.34□□□□□ -1.87
ZNF253O75346 AC107952.2-201ENST00000606048 486 ntBASIC3.34□□□□□ -1.87
ZNF253O75346 MIR6862-1-201ENST00000613016 70 ntBASIC3.34□□□□□ -1.87
ZNF253O75346 MIR6862-2-201ENST00000614755 70 ntBASIC3.34□□□□□ -1.87
ZNF253O75346 AC023158.2-201ENST00000614876 543 ntBASIC3.34□□□□□ -1.87
ZNF253O75346 MIR6891-201ENST00000618788 93 ntBASIC3.34□□□□□ -1.87
ZNF253O75346 MIR7702-201ENST00000621931 59 ntBASIC3.34□□□□□ -1.87
ZNF253O75346 AC097520.1-201ENST00000624435 385 ntBASIC3.34□□□□□ -1.87
ZNF253O75346 AP000676.4-201ENST00000624659 623 ntBASIC3.34□□□□□ -1.87
ZNF253O75346 HSPA8P1-201ENST00000425843 1833 ntBASIC3.34□□□□□ -1.87
ZNF253O75346 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.87
ZNF253O75346 XPOTP1-201ENST00000443317 2398 ntBASIC3.34□□□□□ -1.87
ZNF253O75346 MTND4P8-201ENST00000514997 1362 ntBASIC3.34□□□□□ -1.88
ZNF253O75346 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
ZNF253O75346 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC3.34□□□□□ -1.88
ZNF253O75346 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.88
ZNF253O75346 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.88
ZNF253O75346 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
ZNF253O75346 AC008725.1-201ENST00000605123 2263 ntBASIC3.33□□□□□ -1.88
ZNF253O75346 AC114546.3-201ENST00000623582 1734 ntBASIC3.33□□□□□ -1.88
ZNF253O75346 AL592437.2-201ENST00000421655 2434 ntBASIC3.33□□□□□ -1.88
ZNF253O75346 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.33□□□□□ -1.88
ZNF253O75346 AC103591.2-201ENST00000265259 766 ntBASIC3.33□□□□□ -1.88
ZNF253O75346 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
ZNF253O75346 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ZNF253O75346 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
ZNF253O75346 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
ZNF253O75346 AL590240.1-201ENST00000334118 313 ntBASIC3.33□□□□□ -1.88
ZNF253O75346 NACA3P-201ENST00000359690 648 ntBASIC3.33□□□□□ -1.88
ZNF253O75346 SNORD116.1-201ENST00000365628 92 ntBASIC3.33□□□□□ -1.88
ZNF253O75346 SNORA51.8-201ENST00000384234 132 ntBASIC3.33□□□□□ -1.88
ZNF253O75346 SNORD116-23-201ENST00000384645 92 ntBASIC3.33□□□□□ -1.88
ZNF253O75346 SNORD65.1-201ENST00000390889 71 ntBASIC3.33□□□□□ -1.88
ZNF253O75346 MRM2-202ENST00000407040 582 ntTSL 3 BASIC3.33□□□□□ -1.88
ZNF253O75346 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ZNF253O75346 RHEBP3-201ENST00000411920 351 ntBASIC3.33□□□□□ -1.88
ZNF253O75346 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.33□□□□□ -1.88
ZNF253O75346 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC3.33□□□□□ -1.88
ZNF253O75346 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.33□□□□□ -1.88
ZNF253O75346 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.33□□□□□ -1.88
ZNF253O75346 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.33□□□□□ -1.88
ZNF253O75346 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.33□□□□□ -1.88
ZNF253O75346 AC092447.3-201ENST00000426027 686 ntBASIC3.33□□□□□ -1.88
ZNF253O75346 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.33□□□□□ -1.88
ZNF253O75346 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.33□□□□□ -1.88
ZNF253O75346 DPRXP1-201ENST00000426312 460 ntBASIC3.33□□□□□ -1.88
ZNF253O75346 RPL12P28-201ENST00000430852 489 ntBASIC3.33□□□□□ -1.88
ZNF253O75346 UBE2V1P3-201ENST00000439651 417 ntBASIC3.33□□□□□ -1.88
ZNF253O75346 AL356535.1-201ENST00000440335 398 ntBASIC3.33□□□□□ -1.88
ZNF253O75346 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
ZNF253O75346 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.33□□□□□ -1.88
ZNF253O75346 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.33□□□□□ -1.88
ZNF253O75346 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC3.33□□□□□ -1.88
ZNF253O75346 RPS15AP1-201ENST00000457423 391 ntBASIC3.33□□□□□ -1.88
ZNF253O75346 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC3.33□□□□□ -1.88
ZNF253O75346 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms