Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 CHIAP3-201ENST00000423668 1133 ntBASIC3.99□□□□□ -1.77
LMX1BO60663 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.99□□□□□ -1.77
LMX1BO60663 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.99□□□□□ -1.77
LMX1BO60663 AC244035.1-201ENST00000430042 390 ntBASIC3.99□□□□□ -1.77
LMX1BO60663 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC3.99□□□□□ -1.77
LMX1BO60663 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.99□□□□□ -1.77
LMX1BO60663 NPM1P33-201ENST00000438918 872 ntBASIC3.99□□□□□ -1.77
LMX1BO60663 MTND3P1-201ENST00000441336 220 ntBASIC3.99□□□□□ -1.77
LMX1BO60663 AL162591.2-201ENST00000449634 317 ntBASIC3.99□□□□□ -1.77
LMX1BO60663 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
LMX1BO60663 AL935212.3-201ENST00000450729 284 ntBASIC3.99□□□□□ -1.77
LMX1BO60663 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.99□□□□□ -1.77
LMX1BO60663 AC025164.1-201ENST00000496249 478 ntBASIC3.99□□□□□ -1.77
LMX1BO60663 MTND3P5-201ENST00000512798 333 ntBASIC3.99□□□□□ -1.77
LMX1BO60663 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.99□□□□□ -1.77
LMX1BO60663 RPS27AP18-201ENST00000515536 459 ntBASIC3.99□□□□□ -1.77
LMX1BO60663 AC105185.1-201ENST00000518705 535 ntBASIC3.99□□□□□ -1.77
LMX1BO60663 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
LMX1BO60663 OR5M2P-201ENST00000529003 936 ntBASIC3.99□□□□□ -1.77
LMX1BO60663 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.99□□□□□ -1.77
LMX1BO60663 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.99□□□□□ -1.77
LMX1BO60663 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.99□□□□□ -1.77
LMX1BO60663 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.99□□□□□ -1.77
LMX1BO60663 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC3.99□□□□□ -1.77
LMX1BO60663 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.99□□□□□ -1.77
LMX1BO60663 BNIP3P5-201ENST00000562290 498 ntBASIC3.99□□□□□ -1.77
LMX1BO60663 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.99□□□□□ -1.77
LMX1BO60663 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.99□□□□□ -1.77
LMX1BO60663 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
LMX1BO60663 SLC25A36P1-201ENST00000590111 465 ntBASIC3.99□□□□□ -1.77
LMX1BO60663 AP001542.2-201ENST00000593141 364 ntBASIC3.99□□□□□ -1.77
LMX1BO60663 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
LMX1BO60663 AL031985.2-201ENST00000600955 480 ntBASIC3.99□□□□□ -1.77
LMX1BO60663 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC3.99□□□□□ -1.77
LMX1BO60663 AC103591.3-201ENST00000608684 209 ntBASIC3.99□□□□□ -1.77
LMX1BO60663 AC099676.1-201ENST00000608886 657 ntBASIC3.99□□□□□ -1.77
LMX1BO60663 AL121890.2-201ENST00000617644 465 ntBASIC3.99□□□□□ -1.77
LMX1BO60663 AC007494.3-201ENST00000624660 743 ntBASIC3.99□□□□□ -1.77
LMX1BO60663 AC084035.1-201ENST00000634543 607 ntBASIC3.99□□□□□ -1.77
LMX1BO60663 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.99□□□□□ -1.77
LMX1BO60663 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.99□□□□□ -1.77
LMX1BO60663 FP325313.1-201ENST00000638228 703 ntBASIC3.99□□□□□ -1.77
LMX1BO60663 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
LMX1BO60663 CR381670.1-201ENST00000624291 1693 ntBASIC3.99□□□□□ -1.77
LMX1BO60663 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC3.99□□□□□ -1.77
LMX1BO60663 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
LMX1BO60663 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC3.99□□□□□ -1.77
LMX1BO60663 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
LMX1BO60663 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
LMX1BO60663 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.99□□□□□ -1.77
LMX1BO60663 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LMX1BO60663 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
LMX1BO60663 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
LMX1BO60663 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LMX1BO60663 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
LMX1BO60663 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.98□□□□□ -1.77
LMX1BO60663 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC3.98□□□□□ -1.77
LMX1BO60663 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LMX1BO60663 RNU6-666P-201ENST00000363499 107 ntBASIC3.98□□□□□ -1.77
LMX1BO60663 RNA5SP447-201ENST00000363749 119 ntBASIC3.98□□□□□ -1.77
LMX1BO60663 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
LMX1BO60663 AL078595.1-201ENST00000404458 226 ntBASIC3.98□□□□□ -1.77
LMX1BO60663 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
LMX1BO60663 HDGFP1-201ENST00000405943 252 ntBASIC3.98□□□□□ -1.77
LMX1BO60663 RNA5SP80-201ENST00000410475 111 ntBASIC3.98□□□□□ -1.77
LMX1BO60663 RN7SKP27-201ENST00000410684 333 ntBASIC3.98□□□□□ -1.77
LMX1BO60663 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.98□□□□□ -1.77
LMX1BO60663 LINC01881-201ENST00000416103 412 ntBASIC3.98□□□□□ -1.77
LMX1BO60663 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.98□□□□□ -1.77
LMX1BO60663 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.98□□□□□ -1.77
LMX1BO60663 ATP5F1P1-201ENST00000433775 569 ntBASIC3.98□□□□□ -1.77
LMX1BO60663 AC129850.1-201ENST00000436203 508 ntBASIC3.98□□□□□ -1.77
LMX1BO60663 RPL7P29-201ENST00000437151 728 ntBASIC3.98□□□□□ -1.77
LMX1BO60663 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.98□□□□□ -1.77
LMX1BO60663 AL354941.1-201ENST00000438600 464 ntBASIC3.98□□□□□ -1.77
LMX1BO60663 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.98□□□□□ -1.77
LMX1BO60663 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
LMX1BO60663 AC104689.1-201ENST00000473356 768 ntBASIC3.98□□□□□ -1.77
LMX1BO60663 RPL36AP41-201ENST00000493820 306 ntBASIC3.98□□□□□ -1.77
LMX1BO60663 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.98□□□□□ -1.77
LMX1BO60663 AC098799.3-201ENST00000506095 438 ntBASIC3.98□□□□□ -1.77
LMX1BO60663 AC005178.1-201ENST00000508392 440 ntBASIC3.98□□□□□ -1.77
LMX1BO60663 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.98□□□□□ -1.77
LMX1BO60663 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC3.98□□□□□ -1.77
LMX1BO60663 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.98□□□□□ -1.77
LMX1BO60663 IGLV3-26-201ENST00000520756 302 ntBASIC3.98□□□□□ -1.77
LMX1BO60663 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC3.98□□□□□ -1.77
LMX1BO60663 AP002812.4-201ENST00000532139 286 ntBASIC3.98□□□□□ -1.77
LMX1BO60663 AC092851.1-201ENST00000535964 478 ntBASIC3.98□□□□□ -1.77
LMX1BO60663 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.98□□□□□ -1.77
LMX1BO60663 AL391156.1-201ENST00000554965 554 ntBASIC3.98□□□□□ -1.77
LMX1BO60663 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC3.98□□□□□ -1.77
LMX1BO60663 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.98□□□□□ -1.77
LMX1BO60663 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.98□□□□□ -1.77
LMX1BO60663 NIFKP8-201ENST00000560500 874 ntBASIC3.98□□□□□ -1.77
LMX1BO60663 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.98□□□□□ -1.77
LMX1BO60663 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.98□□□□□ -1.77
LMX1BO60663 ISCA1P3-201ENST00000577104 373 ntBASIC3.98□□□□□ -1.77
LMX1BO60663 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.98□□□□□ -1.77
LMX1BO60663 AP001094.1-201ENST00000579805 193 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms