Protein–RNA interactions for Protein: O43300

LRRTM2, Leucine-rich repeat transmembrane neuronal protein 2, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM2O43300 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.9□□□□□ -1.78
LRRTM2O43300 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.9□□□□□ -1.79
LRRTM2O43300 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
LRRTM2O43300 SNORD56.4-201ENST00000363883 71 ntBASIC3.9□□□□□ -1.79
LRRTM2O43300 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
LRRTM2O43300 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
LRRTM2O43300 RNU6-354P-201ENST00000383862 107 ntBASIC3.9□□□□□ -1.79
LRRTM2O43300 RNU6-356P-201ENST00000384140 107 ntBASIC3.9□□□□□ -1.79
LRRTM2O43300 RNU6-610P-201ENST00000384264 107 ntBASIC3.9□□□□□ -1.79
LRRTM2O43300 SNORA70E-201ENST00000384492 135 ntBASIC3.9□□□□□ -1.79
LRRTM2O43300 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
LRRTM2O43300 AL355143.1-201ENST00000407101 841 ntBASIC3.9□□□□□ -1.79
LRRTM2O43300 RNU6ATAC-201ENST00000408749 126 ntBASIC3.9□□□□□ -1.79
LRRTM2O43300 RNA5SP306-201ENST00000411087 107 ntBASIC3.9□□□□□ -1.79
LRRTM2O43300 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.9□□□□□ -1.79
LRRTM2O43300 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.9□□□□□ -1.79
LRRTM2O43300 AL139095.3-201ENST00000419672 1203 ntBASIC3.9□□□□□ -1.79
LRRTM2O43300 AC005189.1-201ENST00000431286 310 ntBASIC3.9□□□□□ -1.79
LRRTM2O43300 RPS29P7-201ENST00000439662 171 ntBASIC3.9□□□□□ -1.79
LRRTM2O43300 RPL7P55-201ENST00000450522 746 ntBASIC3.9□□□□□ -1.79
LRRTM2O43300 TVP23BP2-201ENST00000455082 615 ntBASIC3.9□□□□□ -1.79
LRRTM2O43300 AC008379.1-201ENST00000463655 464 ntBASIC3.9□□□□□ -1.79
LRRTM2O43300 RPL23AP71-201ENST00000470966 469 ntBASIC3.9□□□□□ -1.79
LRRTM2O43300 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.9□□□□□ -1.79
LRRTM2O43300 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
LRRTM2O43300 AC005351.1-201ENST00000511152 786 ntBASIC3.9□□□□□ -1.79
LRRTM2O43300 NPM1P41-201ENST00000512920 831 ntBASIC3.9□□□□□ -1.79
LRRTM2O43300 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.9□□□□□ -1.79
LRRTM2O43300 OR5BC1P-201ENST00000529327 739 ntBASIC3.9□□□□□ -1.79
LRRTM2O43300 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.9□□□□□ -1.79
LRRTM2O43300 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.9□□□□□ -1.79
LRRTM2O43300 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.9□□□□□ -1.79
LRRTM2O43300 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.9□□□□□ -1.79
LRRTM2O43300 AC104072.1-201ENST00000568817 668 ntBASIC3.9□□□□□ -1.79
LRRTM2O43300 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.9□□□□□ -1.79
LRRTM2O43300 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.9□□□□□ -1.79
LRRTM2O43300 AC124283.4-201ENST00000581815 456 ntBASIC3.9□□□□□ -1.79
LRRTM2O43300 MTATP6P2-201ENST00000603319 678 ntBASIC3.9□□□□□ -1.79
LRRTM2O43300 AC079587.1-201ENST00000603846 277 ntBASIC3.9□□□□□ -1.79
LRRTM2O43300 AC021851.1-201ENST00000608537 1082 ntBASIC3.9□□□□□ -1.79
LRRTM2O43300 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.9□□□□□ -1.79
LRRTM2O43300 VN1R9P-201ENST00000614184 867 ntBASIC3.9□□□□□ -1.79
LRRTM2O43300 MIR6864-201ENST00000617935 70 ntBASIC3.9□□□□□ -1.79
LRRTM2O43300 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.9□□□□□ -1.79
LRRTM2O43300 AC233309.1-201ENST00000619522 751 ntBASIC3.9□□□□□ -1.79
LRRTM2O43300 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.9□□□□□ -1.79
LRRTM2O43300 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
LRRTM2O43300 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.9□□□□□ -1.79
LRRTM2O43300 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
LRRTM2O43300 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.9□□□□□ -1.79
LRRTM2O43300 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
LRRTM2O43300 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
LRRTM2O43300 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.9□□□□□ -1.79
LRRTM2O43300 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
LRRTM2O43300 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LRRTM2O43300 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.89□□□□□ -1.79
LRRTM2O43300 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LRRTM2O43300 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LRRTM2O43300 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LRRTM2O43300 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.89□□□□□ -1.79
LRRTM2O43300 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
LRRTM2O43300 RNA5SP130-201ENST00000364431 114 ntBASIC3.89□□□□□ -1.79
LRRTM2O43300 Y_RNA.333-201ENST00000365274 102 ntBASIC3.89□□□□□ -1.79
LRRTM2O43300 RNU6-1257P-201ENST00000384625 110 ntBASIC3.89□□□□□ -1.79
LRRTM2O43300 SNORD66.1-201ENST00000391230 76 ntBASIC3.89□□□□□ -1.79
LRRTM2O43300 AL024507.1-201ENST00000412741 274 ntBASIC3.89□□□□□ -1.79
LRRTM2O43300 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.89□□□□□ -1.79
LRRTM2O43300 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.89□□□□□ -1.79
LRRTM2O43300 FO393414.1-201ENST00000428697 1184 ntBASIC3.89□□□□□ -1.79
LRRTM2O43300 FO393419.3-201ENST00000428741 282 ntBASIC3.89□□□□□ -1.79
LRRTM2O43300 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.89□□□□□ -1.79
LRRTM2O43300 BTF3P10-201ENST00000433415 495 ntBASIC3.89□□□□□ -1.79
LRRTM2O43300 RPL23AP89-201ENST00000439324 255 ntBASIC3.89□□□□□ -1.79
LRRTM2O43300 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.89□□□□□ -1.79
LRRTM2O43300 ABCF2P2-201ENST00000450549 296 ntBASIC3.89□□□□□ -1.79
LRRTM2O43300 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.89□□□□□ -1.79
LRRTM2O43300 AC091564.1-201ENST00000464563 479 ntBASIC3.89□□□□□ -1.79
LRRTM2O43300 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.89□□□□□ -1.79
LRRTM2O43300 RPL21P18-201ENST00000469899 480 ntBASIC3.89□□□□□ -1.79
LRRTM2O43300 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.89□□□□□ -1.79
LRRTM2O43300 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.89□□□□□ -1.79
LRRTM2O43300 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.89□□□□□ -1.79
LRRTM2O43300 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.89□□□□□ -1.79
LRRTM2O43300 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.89□□□□□ -1.79
LRRTM2O43300 OSBPL9P2-201ENST00000526582 1228 ntBASIC3.89□□□□□ -1.79
LRRTM2O43300 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.89□□□□□ -1.79
LRRTM2O43300 CENPUP2-201ENST00000555897 1186 ntBASIC3.89□□□□□ -1.79
LRRTM2O43300 MIR3944-201ENST00000581277 108 ntBASIC3.89□□□□□ -1.79
LRRTM2O43300 AC006116.7-201ENST00000590141 756 ntBASIC3.89□□□□□ -1.79
LRRTM2O43300 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.89□□□□□ -1.79
LRRTM2O43300 AC008739.3-201ENST00000603262 127 ntBASIC3.89□□□□□ -1.79
LRRTM2O43300 AC018645.2-201ENST00000609151 472 ntBASIC3.89□□□□□ -1.79
LRRTM2O43300 AC121761.2-201ENST00000617300 689 ntBASIC3.89□□□□□ -1.79
LRRTM2O43300 AC083865.1-201ENST00000636634 831 ntBASIC3.89□□□□□ -1.79
LRRTM2O43300 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
LRRTM2O43300 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LRRTM2O43300 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
LRRTM2O43300 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LRRTM2O43300 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.89□□□□□ -1.79
LRRTM2O43300 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms