Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC233728.2-201ENST00000425348 757 ntBASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 RPL12P3-201ENST00000440080 396 ntBASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 AL355472.1-201ENST00000451795 575 ntTSL 5 BASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 GSTA11P-201ENST00000452866 669 ntBASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 AC104472.2-201ENST00000469035 601 ntBASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 AC010618.1-201ENST00000469924 477 ntBASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 MTCO3P35-201ENST00000485582 781 ntBASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 AC013356.1-201ENST00000489027 564 ntBASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 HMGB1P38-201ENST00000490557 577 ntBASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 ENSA-210ENST00000503241 574 ntTSL 3 BASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 AC090071.1-201ENST00000507713 644 ntBASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 RNA5SP49-201ENST00000516450 115 ntBASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 DUXAP6-201ENST00000553858 601 ntBASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 MRPL45P2-203ENST00000573318 473 ntBASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 AL356218.2-201ENST00000605264 187 ntBASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 AC015849.6-201ENST00000605454 474 ntBASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 AL591516.1-201ENST00000611326 274 ntBASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 MIR7109-201ENST00000613748 65 ntBASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 AC004477.3-201ENST00000614061 590 ntBASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 MIR6736-201ENST00000616799 59 ntBASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 AC006249.1-201ENST00000621223 471 ntBASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 AC006378.2-201ENST00000623178 2476 ntBASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 AC119674.1-207ENST00000641355 633 ntBASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 CNOT6LP1-201ENST00000559681 1462 ntBASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 AL353743.4-201ENST00000422653 1547 ntBASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 RN7SKP171-201ENST00000364417 303 ntBASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 RNU6-335P-201ENST00000364563 113 ntBASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 SNORA14A-201ENST00000364773 135 ntBASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 MIR143-201ENST00000385300 106 ntBASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 AL356968.1-201ENST00000416622 474 ntBASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 AC004074.1-201ENST00000421810 1063 ntBASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 AL031736.2-201ENST00000426573 787 ntBASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 AC002069.1-201ENST00000429649 1159 ntBASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 COX6B1P7-201ENST00000430845 235 ntBASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 RPL23AP33-201ENST00000442301 452 ntBASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 RPL23AP12-201ENST00000467573 473 ntBASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 AC020898.1-201ENST00000474167 787 ntBASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 AL132838.2-201ENST00000492041 314 ntBASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 SEM1P1-201ENST00000506694 209 ntBASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 HIGD1AP14-201ENST00000507617 282 ntBASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 APOBEC3AP1-201ENST00000511396 287 ntBASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 RPL7L1P13-201ENST00000511702 739 ntBASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 GMPSP1-201ENST00000514075 579 ntBASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 RNU1-61P-201ENST00000516107 151 ntBASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 TOMM20P1-201ENST00000534518 427 ntBASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 AC005000.1-201ENST00000536192 288 ntBASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC1.86□□□□□ -2.11
CHKB-CPT1BH3BT56 AP000787.2-201ENST00000604432 568 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 154.7 ms