Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.81□□□□□ -1.8
NPIPA2E9PIF3 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NPIPA2E9PIF3 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
NPIPA2E9PIF3 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.81□□□□□ -1.8
NPIPA2E9PIF3 AL592494.2-201ENST00000425455 1548 ntBASIC3.8□□□□□ -1.8
NPIPA2E9PIF3 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.8□□□□□ -1.8
NPIPA2E9PIF3 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NPIPA2E9PIF3 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NPIPA2E9PIF3 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
NPIPA2E9PIF3 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.8□□□□□ -1.8
NPIPA2E9PIF3 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.8□□□□□ -1.8
NPIPA2E9PIF3 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NPIPA2E9PIF3 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.8□□□□□ -1.8
NPIPA2E9PIF3 RNU6-354P-201ENST00000383862 107 ntBASIC3.8□□□□□ -1.8
NPIPA2E9PIF3 RNU6-610P-201ENST00000384264 107 ntBASIC3.8□□□□□ -1.8
NPIPA2E9PIF3 MIR134-201ENST00000385258 73 ntBASIC3.8□□□□□ -1.8
NPIPA2E9PIF3 DNAJC19P6-201ENST00000401853 280 ntBASIC3.8□□□□□ -1.8
NPIPA2E9PIF3 PPIAP31-201ENST00000405422 495 ntBASIC3.8□□□□□ -1.8
NPIPA2E9PIF3 AL445189.1-201ENST00000405722 338 ntBASIC3.8□□□□□ -1.8
NPIPA2E9PIF3 RPL21P65-201ENST00000406094 466 ntBASIC3.8□□□□□ -1.8
NPIPA2E9PIF3 AC092832.1-201ENST00000422934 400 ntBASIC3.8□□□□□ -1.8
NPIPA2E9PIF3 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.8□□□□□ -1.8
NPIPA2E9PIF3 RPL7P2-201ENST00000427639 268 ntBASIC3.8□□□□□ -1.8
NPIPA2E9PIF3 RPL7P4-203ENST00000430239 730 ntBASIC3.8□□□□□ -1.8
NPIPA2E9PIF3 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.8□□□□□ -1.8
NPIPA2E9PIF3 AL359073.1-201ENST00000448036 403 ntBASIC3.8□□□□□ -1.8
NPIPA2E9PIF3 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.8□□□□□ -1.8
NPIPA2E9PIF3 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.8□□□□□ -1.8
NPIPA2E9PIF3 AC008280.2-201ENST00000455473 307 ntBASIC3.8□□□□□ -1.8
NPIPA2E9PIF3 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NPIPA2E9PIF3 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.8□□□□□ -1.8
NPIPA2E9PIF3 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.8□□□□□ -1.8
NPIPA2E9PIF3 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.8□□□□□ -1.8
NPIPA2E9PIF3 AC012170.1-201ENST00000495139 359 ntBASIC3.8□□□□□ -1.8
NPIPA2E9PIF3 AC108145.1-201ENST00000503770 153 ntBASIC3.8□□□□□ -1.8
NPIPA2E9PIF3 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
NPIPA2E9PIF3 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.8□□□□□ -1.8
NPIPA2E9PIF3 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.8□□□□□ -1.8
NPIPA2E9PIF3 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.8□□□□□ -1.8
NPIPA2E9PIF3 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.8□□□□□ -1.8
NPIPA2E9PIF3 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.8□□□□□ -1.8
NPIPA2E9PIF3 AC093227.2-201ENST00000589357 285 ntBASIC3.8□□□□□ -1.8
NPIPA2E9PIF3 AC099676.1-201ENST00000608886 657 ntBASIC3.8□□□□□ -1.8
NPIPA2E9PIF3 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.8□□□□□ -1.8
NPIPA2E9PIF3 AC078880.5-201ENST00000617845 421 ntBASIC3.8□□□□□ -1.8
NPIPA2E9PIF3 AC006249.1-201ENST00000621223 471 ntBASIC3.8□□□□□ -1.8
NPIPA2E9PIF3 AC010608.2-201ENST00000624830 470 ntBASIC3.8□□□□□ -1.8
NPIPA2E9PIF3 FAM157B-203ENST00000639350 358 ntBASIC3.8□□□□□ -1.8
NPIPA2E9PIF3 AC106871.1-201ENST00000568324 3102 ntBASIC3.8□□□□□ -1.8
NPIPA2E9PIF3 RLIMP1-201ENST00000339626 1680 ntBASIC3.8□□□□□ -1.8
NPIPA2E9PIF3 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
NPIPA2E9PIF3 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NPIPA2E9PIF3 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
NPIPA2E9PIF3 NMD3P1-201ENST00000439704 1488 ntBASIC3.79□□□□□ -1.8
NPIPA2E9PIF3 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NPIPA2E9PIF3 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
NPIPA2E9PIF3 RN7SKP280-201ENST00000364196 304 ntBASIC3.79□□□□□ -1.8
NPIPA2E9PIF3 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.79□□□□□ -1.8
NPIPA2E9PIF3 SNORA70E-201ENST00000384492 135 ntBASIC3.79□□□□□ -1.8
NPIPA2E9PIF3 RNU11-4P-201ENST00000391149 133 ntBASIC3.79□□□□□ -1.8
NPIPA2E9PIF3 RPL22P22-201ENST00000395439 379 ntBASIC3.79□□□□□ -1.8
NPIPA2E9PIF3 SNORA11C-201ENST00000408532 129 ntBASIC3.79□□□□□ -1.8
NPIPA2E9PIF3 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NPIPA2E9PIF3 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.79□□□□□ -1.8
NPIPA2E9PIF3 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.79□□□□□ -1.8
NPIPA2E9PIF3 AC246680.2-201ENST00000422106 389 ntBASIC3.79□□□□□ -1.8
NPIPA2E9PIF3 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.79□□□□□ -1.8
NPIPA2E9PIF3 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.79□□□□□ -1.8
NPIPA2E9PIF3 HMGB1P45-201ENST00000435986 653 ntBASIC3.79□□□□□ -1.8
NPIPA2E9PIF3 AC005002.1-201ENST00000447458 540 ntBASIC3.79□□□□□ -1.8
NPIPA2E9PIF3 HMGN1P5-201ENST00000448591 263 ntBASIC3.79□□□□□ -1.8
NPIPA2E9PIF3 PPIAP3-201ENST00000450588 505 ntBASIC3.79□□□□□ -1.8
NPIPA2E9PIF3 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.79□□□□□ -1.8
NPIPA2E9PIF3 RPS4XP6-201ENST00000477670 797 ntBASIC3.79□□□□□ -1.8
NPIPA2E9PIF3 AC104164.2-201ENST00000496953 495 ntBASIC3.79□□□□□ -1.8
NPIPA2E9PIF3 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.79□□□□□ -1.8
NPIPA2E9PIF3 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC3.79□□□□□ -1.8
NPIPA2E9PIF3 PPBPP1-201ENST00000510807 373 ntBASIC3.79□□□□□ -1.8
NPIPA2E9PIF3 RNA5SP154-201ENST00000516193 111 ntBASIC3.79□□□□□ -1.8
NPIPA2E9PIF3 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC3.79□□□□□ -1.8
NPIPA2E9PIF3 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.79□□□□□ -1.8
NPIPA2E9PIF3 AC092851.1-201ENST00000535964 478 ntBASIC3.79□□□□□ -1.8
NPIPA2E9PIF3 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.79□□□□□ -1.8
NPIPA2E9PIF3 AC069240.1-201ENST00000548774 375 ntBASIC3.79□□□□□ -1.8
NPIPA2E9PIF3 AC011611.5-201ENST00000552477 578 ntBASIC3.79□□□□□ -1.8
NPIPA2E9PIF3 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.79□□□□□ -1.8
NPIPA2E9PIF3 AC095057.3-201ENST00000567102 1157 ntBASIC3.79□□□□□ -1.8
NPIPA2E9PIF3 MIR4286-201ENST00000580651 93 ntBASIC3.79□□□□□ -1.8
NPIPA2E9PIF3 AC124283.4-201ENST00000581815 456 ntBASIC3.79□□□□□ -1.8
NPIPA2E9PIF3 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.79□□□□□ -1.8
NPIPA2E9PIF3 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.79□□□□□ -1.8
NPIPA2E9PIF3 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.79□□□□□ -1.8
NPIPA2E9PIF3 AC022916.3-201ENST00000592961 742 ntBASIC3.79□□□□□ -1.8
NPIPA2E9PIF3 MIR6875-201ENST00000617506 72 ntBASIC3.79□□□□□ -1.8
NPIPA2E9PIF3 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
NPIPA2E9PIF3 AC068880.4-201ENST00000623082 495 ntBASIC3.79□□□□□ -1.8
NPIPA2E9PIF3 AC080188.3-201ENST00000624842 748 ntBASIC3.79□□□□□ -1.8
NPIPA2E9PIF3 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
NPIPA2E9PIF3 AC008013.2-202ENST00000637965 364 ntBASIC3.79□□□□□ -1.8
NPIPA2E9PIF3 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms