Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
TCRBV4S1A1TA0A5B7 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.85□□□□□ -1.95
TCRBV4S1A1TA0A5B7 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC2.85□□□□□ -1.95
TCRBV4S1A1TA0A5B7 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC2.85□□□□□ -1.95
TCRBV4S1A1TA0A5B7 HMGN1P15-201ENST00000513870 295 ntBASIC2.85□□□□□ -1.95
TCRBV4S1A1TA0A5B7 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC2.85□□□□□ -1.95
TCRBV4S1A1TA0A5B7 RNU2-27P-201ENST00000516185 142 ntBASIC2.85□□□□□ -1.95
TCRBV4S1A1TA0A5B7 RNU6-579P-201ENST00000516879 102 ntBASIC2.85□□□□□ -1.95
TCRBV4S1A1TA0A5B7 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC2.85□□□□□ -1.95
TCRBV4S1A1TA0A5B7 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC2.85□□□□□ -1.95
TCRBV4S1A1TA0A5B7 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.85□□□□□ -1.95
TCRBV4S1A1TA0A5B7 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.85□□□□□ -1.95
TCRBV4S1A1TA0A5B7 AC006116.10-201ENST00000591836 581 ntBASIC2.85□□□□□ -1.95
TCRBV4S1A1TA0A5B7 BNIP3P38-201ENST00000601117 544 ntBASIC2.85□□□□□ -1.95
TCRBV4S1A1TA0A5B7 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC2.85□□□□□ -1.95
TCRBV4S1A1TA0A5B7 AC010680.3-201ENST00000604215 520 ntBASIC2.85□□□□□ -1.95
TCRBV4S1A1TA0A5B7 ELOCP35-201ENST00000604289 336 ntBASIC2.85□□□□□ -1.95
TCRBV4S1A1TA0A5B7 AL365503.1-201ENST00000605247 905 ntBASIC2.85□□□□□ -1.95
TCRBV4S1A1TA0A5B7 RNU1-30P-201ENST00000606575 163 ntBASIC2.85□□□□□ -1.95
TCRBV4S1A1TA0A5B7 AC244258.1-201ENST00000637553 1071 ntBASIC2.85□□□□□ -1.95
TCRBV4S1A1TA0A5B7 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC2.85□□□□□ -1.95
TCRBV4S1A1TA0A5B7 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
TCRBV4S1A1TA0A5B7 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
TCRBV4S1A1TA0A5B7 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC2.85□□□□□ -1.95
TCRBV4S1A1TA0A5B7 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
TCRBV4S1A1TA0A5B7 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.95
TCRBV4S1A1TA0A5B7 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
TCRBV4S1A1TA0A5B7 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
TCRBV4S1A1TA0A5B7 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
TCRBV4S1A1TA0A5B7 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC2.84□□□□□ -1.95
TCRBV4S1A1TA0A5B7 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
TCRBV4S1A1TA0A5B7 MIR208A-201ENST00000362287 71 ntBASIC2.84□□□□□ -1.95
TCRBV4S1A1TA0A5B7 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
TCRBV4S1A1TA0A5B7 RNU6-761P-201ENST00000384148 107 ntBASIC2.84□□□□□ -1.95
TCRBV4S1A1TA0A5B7 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
TCRBV4S1A1TA0A5B7 MTCO3P31-201ENST00000405526 789 ntBASIC2.84□□□□□ -1.95
TCRBV4S1A1TA0A5B7 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC2.84□□□□□ -1.95
TCRBV4S1A1TA0A5B7 TRAPPC2P10-201ENST00000415662 323 ntBASIC2.84□□□□□ -1.95
TCRBV4S1A1TA0A5B7 AC245054.1-201ENST00000420944 258 ntBASIC2.84□□□□□ -1.95
TCRBV4S1A1TA0A5B7 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC2.84□□□□□ -1.95
TCRBV4S1A1TA0A5B7 ELOCP10-201ENST00000440624 327 ntBASIC2.84□□□□□ -1.95
TCRBV4S1A1TA0A5B7 PRDX3P3-201ENST00000447765 522 ntBASIC2.84□□□□□ -1.95
TCRBV4S1A1TA0A5B7 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC2.84□□□□□ -1.95
TCRBV4S1A1TA0A5B7 AC010468.1-201ENST00000461022 817 ntBASIC2.84□□□□□ -1.95
TCRBV4S1A1TA0A5B7 AC005726.1-201ENST00000494679 427 ntBASIC2.84□□□□□ -1.95
TCRBV4S1A1TA0A5B7 FCF1P3-201ENST00000496394 590 ntBASIC2.84□□□□□ -1.95
TCRBV4S1A1TA0A5B7 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
TCRBV4S1A1TA0A5B7 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC2.84□□□□□ -1.95
TCRBV4S1A1TA0A5B7 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
TCRBV4S1A1TA0A5B7 AC023161.2-201ENST00000551218 780 ntBASIC2.84□□□□□ -1.95
TCRBV4S1A1TA0A5B7 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC2.84□□□□□ -1.95
TCRBV4S1A1TA0A5B7 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC2.84□□□□□ -1.95
TCRBV4S1A1TA0A5B7 MTND2P13-201ENST00000577438 1039 ntBASIC2.84□□□□□ -1.95
TCRBV4S1A1TA0A5B7 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC2.84□□□□□ -1.95
TCRBV4S1A1TA0A5B7 MIR3922-201ENST00000585192 84 ntBASIC2.84□□□□□ -1.95
TCRBV4S1A1TA0A5B7 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.84□□□□□ -1.95
TCRBV4S1A1TA0A5B7 ELOCP34-201ENST00000604436 327 ntBASIC2.84□□□□□ -1.95
TCRBV4S1A1TA0A5B7 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC2.84□□□□□ -1.95
TCRBV4S1A1TA0A5B7 AC069209.1-201ENST00000619282 651 ntBASIC2.84□□□□□ -1.95
TCRBV4S1A1TA0A5B7 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
TCRBV4S1A1TA0A5B7 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
TCRBV4S1A1TA0A5B7 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
TCRBV4S1A1TA0A5B7 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC2.84□□□□□ -1.96
TCRBV4S1A1TA0A5B7 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.96
TCRBV4S1A1TA0A5B7 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC2.84□□□□□ -1.96
TCRBV4S1A1TA0A5B7 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC2.84□□□□□ -1.96
TCRBV4S1A1TA0A5B7 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
TCRBV4S1A1TA0A5B7 MFSD8-236ENST00000641509 4050 ntBASIC2.83□□□□□ -1.96
TCRBV4S1A1TA0A5B7 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
TCRBV4S1A1TA0A5B7 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
TCRBV4S1A1TA0A5B7 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC2.83□□□□□ -1.96
TCRBV4S1A1TA0A5B7 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
TCRBV4S1A1TA0A5B7 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
TCRBV4S1A1TA0A5B7 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
TCRBV4S1A1TA0A5B7 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC2.83□□□□□ -1.96
TCRBV4S1A1TA0A5B7 SNORD9-201ENST00000362566 104 ntBASIC2.83□□□□□ -1.96
TCRBV4S1A1TA0A5B7 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC2.83□□□□□ -1.96
TCRBV4S1A1TA0A5B7 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC2.83□□□□□ -1.96
TCRBV4S1A1TA0A5B7 SOD2P1-201ENST00000396543 562 ntBASIC2.83□□□□□ -1.96
TCRBV4S1A1TA0A5B7 U3.39-201ENST00000408569 239 ntBASIC2.83□□□□□ -1.96
TCRBV4S1A1TA0A5B7 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC2.83□□□□□ -1.96
TCRBV4S1A1TA0A5B7 RPS7P15-201ENST00000415804 584 ntBASIC2.83□□□□□ -1.96
TCRBV4S1A1TA0A5B7 AC245052.5-201ENST00000416320 649 ntBASIC2.83□□□□□ -1.96
TCRBV4S1A1TA0A5B7 RPL31P12-201ENST00000422587 358 ntBASIC2.83□□□□□ -1.96
TCRBV4S1A1TA0A5B7 AC244033.1-201ENST00000426826 870 ntBASIC2.83□□□□□ -1.96
TCRBV4S1A1TA0A5B7 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC2.83□□□□□ -1.96
TCRBV4S1A1TA0A5B7 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC2.83□□□□□ -1.96
TCRBV4S1A1TA0A5B7 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC2.83□□□□□ -1.96
TCRBV4S1A1TA0A5B7 AC006539.3-201ENST00000454258 129 ntBASIC2.83□□□□□ -1.96
TCRBV4S1A1TA0A5B7 AP000893.1-201ENST00000474462 794 ntBASIC2.83□□□□□ -1.96
TCRBV4S1A1TA0A5B7 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC2.83□□□□□ -1.96
TCRBV4S1A1TA0A5B7 RPL32P34-201ENST00000486380 400 ntBASIC2.83□□□□□ -1.96
TCRBV4S1A1TA0A5B7 AC074250.1-201ENST00000511117 192 ntBASIC2.83□□□□□ -1.96
TCRBV4S1A1TA0A5B7 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC2.83□□□□□ -1.96
TCRBV4S1A1TA0A5B7 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC2.83□□□□□ -1.96
TCRBV4S1A1TA0A5B7 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC2.83□□□□□ -1.96
TCRBV4S1A1TA0A5B7 OR4C2P-201ENST00000530855 1064 ntBASIC2.83□□□□□ -1.96
TCRBV4S1A1TA0A5B7 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
TCRBV4S1A1TA0A5B7 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC2.83□□□□□ -1.96
TCRBV4S1A1TA0A5B7 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms