Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.05■□□□□ 0.48
PCDHGA9Q9Y5G4 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
PCDHGA9Q9Y5G4 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA9Q9Y5G4 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA9Q9Y5G4 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA9Q9Y5G4 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA9Q9Y5G4 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
PCDHGA9Q9Y5G4 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDHGA9Q9Y5G4 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.05■□□□□ 0.48
PCDHGA9Q9Y5G4 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHGA9Q9Y5G4 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA9Q9Y5G4 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA9Q9Y5G4 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA9Q9Y5G4 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHGA9Q9Y5G4 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA9Q9Y5G4 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA9Q9Y5G4 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHGA9Q9Y5G4 DPP3P2-201ENST00000416030 1696 ntBASIC18.04■□□□□ 0.48
PCDHGA9Q9Y5G4 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
PCDHGA9Q9Y5G4 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA9Q9Y5G4 AC063952.2-201ENST00000498792 1227 ntBASIC18.04■□□□□ 0.48
PCDHGA9Q9Y5G4 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHGA9Q9Y5G4 AC022616.7-201ENST00000525383 220 ntBASIC18.04■□□□□ 0.48
PCDHGA9Q9Y5G4 SLC25A1P4-201ENST00000567977 778 ntBASIC18.04■□□□□ 0.48
PCDHGA9Q9Y5G4 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHGA9Q9Y5G4 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA9Q9Y5G4 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.04■□□□□ 0.48
PCDHGA9Q9Y5G4 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA9Q9Y5G4 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA9Q9Y5G4 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA9Q9Y5G4 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA9Q9Y5G4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHGA9Q9Y5G4 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA9Q9Y5G4 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA9Q9Y5G4 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PCDHGA9Q9Y5G4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA9Q9Y5G4 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHGA9Q9Y5G4 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA9Q9Y5G4 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA9Q9Y5G4 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA9Q9Y5G4 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
PCDHGA9Q9Y5G4 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA9Q9Y5G4 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA9Q9Y5G4 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.03■□□□□ 0.48
PCDHGA9Q9Y5G4 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.03■□□□□ 0.48
PCDHGA9Q9Y5G4 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA9Q9Y5G4 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.03■□□□□ 0.48
PCDHGA9Q9Y5G4 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.03■□□□□ 0.48
PCDHGA9Q9Y5G4 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHGA9Q9Y5G4 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHGA9Q9Y5G4 AC116562.4-202ENST00000641738 218 ntBASIC18.03■□□□□ 0.48
PCDHGA9Q9Y5G4 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.03■□□□□ 0.48
PCDHGA9Q9Y5G4 AC112907.3-201ENST00000577781 2400 ntBASIC18.03■□□□□ 0.48
PCDHGA9Q9Y5G4 RCC2P6-201ENST00000526625 1557 ntBASIC18.03■□□□□ 0.48
PCDHGA9Q9Y5G4 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA9Q9Y5G4 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHGA9Q9Y5G4 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHGA9Q9Y5G4 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA9Q9Y5G4 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA9Q9Y5G4 AC096733.2-201ENST00000609937 1394 ntBASIC18.03■□□□□ 0.48
PCDHGA9Q9Y5G4 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA9Q9Y5G4 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.02■□□□□ 0.48
PCDHGA9Q9Y5G4 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA9Q9Y5G4 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
PCDHGA9Q9Y5G4 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA9Q9Y5G4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA9Q9Y5G4 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA9Q9Y5G4 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA9Q9Y5G4 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.02■□□□□ 0.48
PCDHGA9Q9Y5G4 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.02■□□□□ 0.48
PCDHGA9Q9Y5G4 AC004951.3-201ENST00000418645 1148 ntBASIC18.02■□□□□ 0.48
PCDHGA9Q9Y5G4 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA9Q9Y5G4 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
PCDHGA9Q9Y5G4 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.02■□□□□ 0.48
PCDHGA9Q9Y5G4 CCR12P-201ENST00000446203 998 ntBASIC18.02■□□□□ 0.48
PCDHGA9Q9Y5G4 AL512408.1-201ENST00000569378 2000 ntBASIC18.02■□□□□ 0.48
PCDHGA9Q9Y5G4 AC091076.1-201ENST00000610741 619 ntBASIC18.02■□□□□ 0.48
PCDHGA9Q9Y5G4 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.02■□□□□ 0.48
PCDHGA9Q9Y5G4 AC011298.2-201ENST00000617989 482 ntBASIC18.02■□□□□ 0.48
PCDHGA9Q9Y5G4 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
PCDHGA9Q9Y5G4 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA9Q9Y5G4 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGA9Q9Y5G4 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.02■□□□□ 0.47
PCDHGA9Q9Y5G4 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHGA9Q9Y5G4 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHGA9Q9Y5G4 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHGA9Q9Y5G4 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.02■□□□□ 0.47
PCDHGA9Q9Y5G4 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHGA9Q9Y5G4 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHGA9Q9Y5G4 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
PCDHGA9Q9Y5G4 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGA9Q9Y5G4 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
PCDHGA9Q9Y5G4 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDHGA9Q9Y5G4 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGA9Q9Y5G4 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.01■□□□□ 0.47
PCDHGA9Q9Y5G4 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGA9Q9Y5G4 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDHGA9Q9Y5G4 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
PCDHGA9Q9Y5G4 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGA9Q9Y5G4 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms