Protein–RNA interactions for Protein: Q9NUW8

TDP1, Tyrosyl-DNA phosphodiesterase 1, humanhuman

Predictions only

Length 608 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1Q9NUW8 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.89■□□□□ 0.77
TDP1Q9NUW8 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TDP1Q9NUW8 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.89■□□□□ 0.77
TDP1Q9NUW8 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.89■□□□□ 0.77
TDP1Q9NUW8 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
TDP1Q9NUW8 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
TDP1Q9NUW8 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.89■□□□□ 0.77
TDP1Q9NUW8 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.89■□□□□ 0.77
TDP1Q9NUW8 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TDP1Q9NUW8 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.89■□□□□ 0.77
TDP1Q9NUW8 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TDP1Q9NUW8 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TDP1Q9NUW8 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.89■□□□□ 0.77
TDP1Q9NUW8 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.89■□□□□ 0.77
TDP1Q9NUW8 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.89■□□□□ 0.77
TDP1Q9NUW8 AC011558.1-201ENST00000623459 338 ntBASIC19.89■□□□□ 0.77
TDP1Q9NUW8 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TDP1Q9NUW8 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TDP1Q9NUW8 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
TDP1Q9NUW8 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TDP1Q9NUW8 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TDP1Q9NUW8 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
TDP1Q9NUW8 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TDP1Q9NUW8 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.88■□□□□ 0.77
TDP1Q9NUW8 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
TDP1Q9NUW8 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TDP1Q9NUW8 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
TDP1Q9NUW8 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TDP1Q9NUW8 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.88■□□□□ 0.77
TDP1Q9NUW8 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TDP1Q9NUW8 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TDP1Q9NUW8 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.88■□□□□ 0.77
TDP1Q9NUW8 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TDP1Q9NUW8 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.88■□□□□ 0.77
TDP1Q9NUW8 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.88■□□□□ 0.77
TDP1Q9NUW8 AC092647.4-201ENST00000457211 535 ntBASIC19.88■□□□□ 0.77
TDP1Q9NUW8 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.88■□□□□ 0.77
TDP1Q9NUW8 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.88■□□□□ 0.77
TDP1Q9NUW8 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.88■□□□□ 0.77
TDP1Q9NUW8 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.88■□□□□ 0.77
TDP1Q9NUW8 LINC01006-201ENST00000333319 2292 ntBASIC19.88■□□□□ 0.77
TDP1Q9NUW8 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TDP1Q9NUW8 TCF3P1-201ENST00000423021 1937 ntBASIC19.88■□□□□ 0.77
TDP1Q9NUW8 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TDP1Q9NUW8 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
TDP1Q9NUW8 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TDP1Q9NUW8 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TDP1Q9NUW8 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TDP1Q9NUW8 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TDP1Q9NUW8 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TDP1Q9NUW8 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TDP1Q9NUW8 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.87■□□□□ 0.77
TDP1Q9NUW8 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TDP1Q9NUW8 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
TDP1Q9NUW8 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
TDP1Q9NUW8 MYC-208ENST00000641036 567 ntBASIC19.87■□□□□ 0.77
TDP1Q9NUW8 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
TDP1Q9NUW8 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.87■□□□□ 0.77
TDP1Q9NUW8 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TDP1Q9NUW8 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.87■□□□□ 0.77
TDP1Q9NUW8 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.87■□□□□ 0.77
TDP1Q9NUW8 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
TDP1Q9NUW8 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.86■□□□□ 0.77
TDP1Q9NUW8 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TDP1Q9NUW8 AC104417.2-201ENST00000562989 1793 ntBASIC19.86■□□□□ 0.77
TDP1Q9NUW8 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.86■□□□□ 0.77
TDP1Q9NUW8 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TDP1Q9NUW8 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TDP1Q9NUW8 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TDP1Q9NUW8 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TDP1Q9NUW8 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.86■□□□□ 0.77
TDP1Q9NUW8 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TDP1Q9NUW8 AC140113.3-201ENST00000605663 199 ntBASIC19.86■□□□□ 0.77
TDP1Q9NUW8 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.86■□□□□ 0.77
TDP1Q9NUW8 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TDP1Q9NUW8 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.86■□□□□ 0.77
TDP1Q9NUW8 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
TDP1Q9NUW8 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
TDP1Q9NUW8 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TDP1Q9NUW8 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TDP1Q9NUW8 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TDP1Q9NUW8 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.86■□□□□ 0.77
TDP1Q9NUW8 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
TDP1Q9NUW8 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
TDP1Q9NUW8 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TDP1Q9NUW8 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
TDP1Q9NUW8 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TDP1Q9NUW8 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TDP1Q9NUW8 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TDP1Q9NUW8 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.85■□□□□ 0.77
TDP1Q9NUW8 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TDP1Q9NUW8 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TDP1Q9NUW8 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TDP1Q9NUW8 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TDP1Q9NUW8 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
TDP1Q9NUW8 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TDP1Q9NUW8 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.85■□□□□ 0.77
TDP1Q9NUW8 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.85■□□□□ 0.77
TDP1Q9NUW8 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.85■□□□□ 0.77
TDP1Q9NUW8 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms