Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 CKBP1-201ENST00000565489 1086 ntBASIC17.46■□□□□ 0.39
SPENQ96T58 MIR4674-201ENST00000582457 87 ntBASIC17.46■□□□□ 0.39
SPENQ96T58 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SPENQ96T58 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.46■□□□□ 0.39
SPENQ96T58 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.46■□□□□ 0.39
SPENQ96T58 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
SPENQ96T58 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.46■□□□□ 0.39
SPENQ96T58 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SPENQ96T58 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SPENQ96T58 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SPENQ96T58 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SPENQ96T58 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.45■□□□□ 0.38
SPENQ96T58 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.45■□□□□ 0.38
SPENQ96T58 GPALPP1-207ENST00000611650 899 ntBASIC17.45■□□□□ 0.38
SPENQ96T58 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPENQ96T58 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPENQ96T58 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.45■□□□□ 0.38
SPENQ96T58 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.45■□□□□ 0.38
SPENQ96T58 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SPENQ96T58 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.45■□□□□ 0.38
SPENQ96T58 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SPENQ96T58 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPENQ96T58 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.45■□□□□ 0.38
SPENQ96T58 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.45■□□□□ 0.38
SPENQ96T58 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPENQ96T58 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
SPENQ96T58 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.45■□□□□ 0.38
SPENQ96T58 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SPENQ96T58 AC131212.4-201ENST00000623606 975 ntBASIC17.45■□□□□ 0.38
SPENQ96T58 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPENQ96T58 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SPENQ96T58 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPENQ96T58 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPENQ96T58 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPENQ96T58 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPENQ96T58 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPENQ96T58 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.45■□□□□ 0.38
SPENQ96T58 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
SPENQ96T58 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.45■□□□□ 0.38
SPENQ96T58 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPENQ96T58 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SPENQ96T58 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.45■□□□□ 0.38
SPENQ96T58 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPENQ96T58 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPENQ96T58 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.45■□□□□ 0.38
SPENQ96T58 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.45■□□□□ 0.38
SPENQ96T58 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.45■□□□□ 0.38
SPENQ96T58 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SPENQ96T58 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SPENQ96T58 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SPENQ96T58 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SPENQ96T58 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SPENQ96T58 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.44■□□□□ 0.38
SPENQ96T58 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.44■□□□□ 0.38
SPENQ96T58 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SPENQ96T58 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
SPENQ96T58 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SPENQ96T58 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SPENQ96T58 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.44■□□□□ 0.38
SPENQ96T58 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SPENQ96T58 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.44■□□□□ 0.38
SPENQ96T58 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
SPENQ96T58 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.44■□□□□ 0.38
SPENQ96T58 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SPENQ96T58 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
SPENQ96T58 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.44■□□□□ 0.38
SPENQ96T58 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SPENQ96T58 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SPENQ96T58 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.43■□□□□ 0.38
SPENQ96T58 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SPENQ96T58 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SPENQ96T58 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.43■□□□□ 0.38
SPENQ96T58 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SPENQ96T58 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SPENQ96T58 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SPENQ96T58 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SPENQ96T58 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SPENQ96T58 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.43■□□□□ 0.38
SPENQ96T58 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SPENQ96T58 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SPENQ96T58 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.43■□□□□ 0.38
SPENQ96T58 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SPENQ96T58 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SPENQ96T58 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.43■□□□□ 0.38
SPENQ96T58 AL031008.1-201ENST00000619963 541 ntBASIC17.43■□□□□ 0.38
SPENQ96T58 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
SPENQ96T58 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SPENQ96T58 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SPENQ96T58 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SPENQ96T58 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
SPENQ96T58 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.43■□□□□ 0.38
SPENQ96T58 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SPENQ96T58 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
SPENQ96T58 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SPENQ96T58 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SPENQ96T58 AL136038.3-201ENST00000561909 1096 ntBASIC17.42■□□□□ 0.38
SPENQ96T58 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.42■□□□□ 0.38
SPENQ96T58 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SPENQ96T58 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SPENQ96T58 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms